| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yxiO [H]
Identifier: 222526513
GI number: 222526513
Start: 4088564
End: 4089904
Strand: Direct
Name: yxiO [H]
Synonym: Chy400_3280
Alternate gene names: 222526513
Gene position: 4088564-4089904 (Clockwise)
Preceding gene: 222526512
Following gene: 222526514
Centisome position: 77.6
GC content: 54.44
Gene sequence:
>1341_bases ATGACCACGCTTGCTGCCTCGACCGATAATCGTCGCGAACAGGTTGGCTGGTATTTTTACGACTGGGCCAATTCGGCATT TTCGACCACAGTAGTGACCGTTTTCTTAGGGCCATACCTCACCTCAATTACCCGTAATGCGGCTGATGCGAATGGATTTG TCTATCCGTTTGGGATACCGGTGGCAGCCGGTTCTTTTTTTCCTTACATGGTTTCGCTCTCGGTCTTGTTACAGGTCTTC TTTTTACCCATCCTTGGTGCCATTGCCGATTACTCCAACGCTCGCAAGCAAATGCTGGCGATCTTTGCGTATGTAGGGGC ATTTGCCACTATGGGCCTCTACTTTCTTGAAGGCACCAACTATCTGCTGGGTGGAATCCTGTTCCTGATCGCCAACCTCA CCTTTGGCGCCTCGATAGTCTTTTACAACGCTTTCTTGCCGGATATTGCCAGTCCTGATCGGCGAGACGCCGTTTCTTCA CAGGGATGGGCGCTTGGATATCTGGGCGGCGGCTTATTACTGGCGGCCAACCTGGTCTTCTTTTTAAATGCCGGCTCGTT CGGGGTTGAGAGTGGGATGGCGGTGCGAATCAGCCTGGTGTCCGCCGGCATGTGGTGGGCCATTTTTACGCTCATTCCAA TGTGGACGCTACGGAACCGTGGTGCAGTTCGGCGCTTACCGCCTGGCGAGAACTATTTGACGGTCGGCTTCCGTCAGTTA GCCCACACATTTCGGCAGATGCGCGGTTATCCACAAACCCTGCTCTTCCTGGCGGCGTATCTACTCTACAACGACGGTAT TCAGGCGGTCATTGCGCTGGCTGCGCAATTCGGGGCCGAAGAGCTTGGCATCGGCGAGTCAACCCGGATTGCCACTATCT TGATGGTACAGTTCGTCGCTTTCTTCGGCGCCCTGATCTTCGGTGCTCTGGCAACACGGTTGGGTTCAAAACGAGTGTTG CTGGGTAGTCTGGTCATTTGGACACTGGTCGTCAGTTATGCCTACATTATGCCGGCCAACAACGATGTGCAATTCTTTGC ACTCGGTGCGGCAATTGCCCTGGTGTTGGGGGGGAGTCAGGCAATCAGTAGGTCGCTGTTTTCGCTCATGATCCCTGATG GTCAGGAGGCAGAGTACTTTAGCCTGTACGAAGTGGGTGAGCGCGGCACGAGCTGGCTGGCGCCACTCTTGTTCGGGGTT GCCTACCAGATGACCGGTAGCTACCGGATCGCCATTGTCTCACTGATTATCTTTTTCATCAGTGGGTTTATCCTGCTCTT GTTCGTGAATGTACGGCGGGCGGCTGCCGAAGCCGGTAATCAGGCACCGGCGCATGTGTAG
Upstream 100 bases:
>100_bases GTGGTACAATAGCCACGCCGTGCAGGTTTATATCTAAATCCCTTCTCCCGGTACTGGCTTTGTCCATCGGTACGTGAGTG CTGACTACGAAGGAGTTTGC
Downstream 100 bases:
>100_bases AACTCATTTCAAAAAAGCTGTGCTGTCGTGCGTCCAGACAGTTGCCCAGGCGTCTGAATGCTTGCCAATCGTCAACAACA GTCTACCCGGCTCCTGGCCT
Product: permease of the major facilitator superfamily-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MTTLAASTDNRREQVGWYFYDWANSAFSTTVVTVFLGPYLTSITRNAADANGFVYPFGIPVAAGSFFPYMVSLSVLLQVF FLPILGAIADYSNARKQMLAIFAYVGAFATMGLYFLEGTNYLLGGILFLIANLTFGASIVFYNAFLPDIASPDRRDAVSS QGWALGYLGGGLLLAANLVFFLNAGSFGVESGMAVRISLVSAGMWWAIFTLIPMWTLRNRGAVRRLPPGENYLTVGFRQL AHTFRQMRGYPQTLLFLAAYLLYNDGIQAVIALAAQFGAEELGIGESTRIATILMVQFVAFFGALIFGALATRLGSKRVL LGSLVIWTLVVSYAYIMPANNDVQFFALGAAIALVLGGSQAISRSLFSLMIPDGQEAEYFSLYEVGERGTSWLAPLLFGV AYQMTGSYRIAIVSLIIFFISGFILLLFVNVRRAAAEAGNQAPAHV
Sequences:
>Translated_446_residues MTTLAASTDNRREQVGWYFYDWANSAFSTTVVTVFLGPYLTSITRNAADANGFVYPFGIPVAAGSFFPYMVSLSVLLQVF FLPILGAIADYSNARKQMLAIFAYVGAFATMGLYFLEGTNYLLGGILFLIANLTFGASIVFYNAFLPDIASPDRRDAVSS QGWALGYLGGGLLLAANLVFFLNAGSFGVESGMAVRISLVSAGMWWAIFTLIPMWTLRNRGAVRRLPPGENYLTVGFRQL AHTFRQMRGYPQTLLFLAAYLLYNDGIQAVIALAAQFGAEELGIGESTRIATILMVQFVAFFGALIFGALATRLGSKRVL LGSLVIWTLVVSYAYIMPANNDVQFFALGAAIALVLGGSQAISRSLFSLMIPDGQEAEYFSLYEVGERGTSWLAPLLFGV AYQMTGSYRIAIVSLIIFFISGFILLLFVNVRRAAAEAGNQAPAHV >Mature_445_residues TTLAASTDNRREQVGWYFYDWANSAFSTTVVTVFLGPYLTSITRNAADANGFVYPFGIPVAAGSFFPYMVSLSVLLQVFF LPILGAIADYSNARKQMLAIFAYVGAFATMGLYFLEGTNYLLGGILFLIANLTFGASIVFYNAFLPDIASPDRRDAVSSQ GWALGYLGGGLLLAANLVFFLNAGSFGVESGMAVRISLVSAGMWWAIFTLIPMWTLRNRGAVRRLPPGENYLTVGFRQLA HTFRQMRGYPQTLLFLAAYLLYNDGIQAVIALAAQFGAEELGIGESTRIATILMVQFVAFFGALIFGALATRLGSKRVLL GSLVIWTLVVSYAYIMPANNDVQFFALGAAIALVLGGSQAISRSLFSLMIPDGQEAEYFSLYEVGERGTSWLAPLLFGVA YQMTGSYRIAIVSLIIFFISGFILLLFVNVRRAAAEAGNQAPAHV
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319811, Length=493, Percent_Identity=25.7606490872211, Blast_Score=122, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48453; Mature: 48322
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLAASTDNRREQVGWYFYDWANSAFSTTVVTVFLGPYLTSITRNAADANGFVYPFGIP CCCCCCCCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC VAAGSFFPYMVSLSVLLQVFFLPILGAIADYSNARKQMLAIFAYVGAFATMGLYFLEGTN HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH YLLGGILFLIANLTFGASIVFYNAFLPDIASPDRRDAVSSQGWALGYLGGGLLLAANLVF HHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHH FLNAGSFGVESGMAVRISLVSAGMWWAIFTLIPMWTLRNRGAVRRLPPGENYLTVGFRQL HEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHH AHTFRQMRGYPQTLLFLAAYLLYNDGIQAVIALAAQFGAEELGIGESTRIATILMVQFVA HHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHH FFGALIFGALATRLGSKRVLLGSLVIWTLVVSYAYIMPANNDVQFFALGAAIALVLGGSQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHCCHH AISRSLFSLMIPDGQEAEYFSLYEVGERGTSWLAPLLFGVAYQMTGSYRIAIVSLIIFFI HHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SGFILLLFVNVRRAAAEAGNQAPAHV HHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TTLAASTDNRREQVGWYFYDWANSAFSTTVVTVFLGPYLTSITRNAADANGFVYPFGIP CCCCCCCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC VAAGSFFPYMVSLSVLLQVFFLPILGAIADYSNARKQMLAIFAYVGAFATMGLYFLEGTN HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH YLLGGILFLIANLTFGASIVFYNAFLPDIASPDRRDAVSSQGWALGYLGGGLLLAANLVF HHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHH FLNAGSFGVESGMAVRISLVSAGMWWAIFTLIPMWTLRNRGAVRRLPPGENYLTVGFRQL HEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHH AHTFRQMRGYPQTLLFLAAYLLYNDGIQAVIALAAQFGAEELGIGESTRIATILMVQFVA HHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHH FFGALIFGALATRLGSKRVLLGSLVIWTLVVSYAYIMPANNDVQFFALGAAIALVLGGSQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHCCHH AISRSLFSLMIPDGQEAEYFSLYEVGERGTSWLAPLLFGVAYQMTGSYRIAIVSLIIFFI HHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SGFILLLFVNVRRAAAEAGNQAPAHV HHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]