| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526489
Identifier: 222526489
GI number: 222526489
Start: 4061574
End: 4062455
Strand: Direct
Name: 222526489
Synonym: Chy400_3256
Alternate gene names: NA
Gene position: 4061574-4062455 (Clockwise)
Preceding gene: 222526484
Following gene: 222526490
Centisome position: 77.09
GC content: 64.51
Gene sequence:
>882_bases ATGCGCCTGTACAGTGGTCGGCTAGCACGACAGAGCAGCTTTTATAAAATAAGTTCTATTCTACCTCTTACCTCCCACCT TCTCTCTCCTACCTCCCACCGTCTCGTCCCTACCTCTCTCGCTCCTACCTCCCACCGTCTCGCCCCTACCTCTCTCGCTC CTACCTCCCACCGTCTCGCTCCTACCTTCTCCCGTCTCGCTCCTACCTCCCTCGCTCCTACCTTCTCCCGTCTCGCTCCT CCCTCCTCCTGTCTCGCCCCTACCTCTCTCGCTCCTACCTCCCACCGTCTCGCTCCTCCCTCCTCCTGTCTCGCCCCTAC CTCTCTCGCTCCTACCTCCCACCGTCTCGCTCCTACCTTCTCCCGTCTCGCTCCTACCTCCCTCGCTCCTACCTCCCCCC GTCTCGCTCCTCCCTCCTCCTGTCTCGCCCCTACCTCTCTCGCTCCTCCCTCCCCCCGTCTCGCTCCTCCCTCCTCCTGT CTCGCCCCTACCTCTCTCGCTCCTCCCTCCCCCCGTCTCGCTCCTCCCTCTCTCGCTCCTCCCTCCTCCCGTCTCGCTCC TCCCTCCCCCCGTCTCGCTCCTCCCTCTCTCGCTCCTACCTCTCTCGCTCCTCCCTCCCCCCGTCTCGCCCCTACCTCTC TCGCTCCTCCCTCCCCCCGTCTCGCTCCTCCCTCTCTCGCTCCTCCCTCCTCCCGTCTCGCTCCTCCCTCCCCCCGTCTC GCTCCTACCTCTCTCGCTCCTCCCTCCCCCCGTCTCGCCCCTACCTCCCCCCGTCTTGCCCCTACCTCTCTCTCCTACCT CCTCCCGTCTCGCCCCTACCTTCTCCCATCTATCTCCTATCTCCTATTTCCTACTTTCTATCTCCTCCCTCCCCCATCTT AG
Upstream 100 bases:
>100_bases CAACCTATCTAACACGTGATGGCACTGGCGATGGTTATTAGAGCGCGATAGTACAGCTTTTTATGAAATAAGTTTTATCT TTGTTGATTGGCAAGCGTTC
Downstream 100 bases:
>100_bases GCCAGATTCAGGTTTGCGGAATTGCCGATACTGTTGTATACTGTCTACGGCTAGGGTACAGCCACAGGGTATTAGTGTGT ACTAAGCCCATGGCCCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MRLYSGRLARQSSFYKISSILPLTSHLLSPTSHRLVPTSLAPTSHRLAPTSLAPTSHRLAPTFSRLAPTSLAPTFSRLAP PSSCLAPTSLAPTSHRLAPPSSCLAPTSLAPTSHRLAPTFSRLAPTSLAPTSPRLAPPSSCLAPTSLAPPSPRLAPPSSC LAPTSLAPPSPRLAPPSLAPPSSRLAPPSPRLAPPSLAPTSLAPPSPRLAPTSLAPPSPRLAPPSLAPPSSRLAPPSPRL APTSLAPPSPRLAPTSPRLAPTSLSYLLPSRPYLLPSISYLLFPTFYLLPPPS
Sequences:
>Translated_293_residues MRLYSGRLARQSSFYKISSILPLTSHLLSPTSHRLVPTSLAPTSHRLAPTSLAPTSHRLAPTFSRLAPTSLAPTFSRLAP PSSCLAPTSLAPTSHRLAPPSSCLAPTSLAPTSHRLAPTFSRLAPTSLAPTSPRLAPPSSCLAPTSLAPPSPRLAPPSSC LAPTSLAPPSPRLAPPSLAPPSSRLAPPSPRLAPPSLAPTSLAPPSPRLAPTSLAPPSPRLAPPSLAPPSSRLAPPSPRL APTSLAPPSPRLAPTSPRLAPTSLSYLLPSRPYLLPSISYLLFPTFYLLPPPS >Mature_293_residues MRLYSGRLARQSSFYKISSILPLTSHLLSPTSHRLVPTSLAPTSHRLAPTSLAPTSHRLAPTFSRLAPTSLAPTFSRLAP PSSCLAPTSLAPTSHRLAPPSSCLAPTSLAPTSHRLAPTFSRLAPTSLAPTSPRLAPPSSCLAPTSLAPPSPRLAPPSSC LAPTSLAPPSPRLAPPSLAPPSSRLAPPSPRLAPPSLAPTSLAPPSPRLAPTSLAPPSPRLAPPSLAPPSSRLAPPSPRL APTSLAPPSPRLAPTSPRLAPTSLSYLLPSRPYLLPSISYLLFPTFYLLPPPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30303; Mature: 30303
Theoretical pI: Translated: 12.54; Mature: 12.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLYSGRLARQSSFYKISSILPLTSHLLSPTSHRLVPTSLAPTSHRLAPTSLAPTSHRLA CCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC PTFSRLAPTSLAPTFSRLAPPSSCLAPTSLAPTSHRLAPPSSCLAPTSLAPTSHRLAPTF HHHHHHCCCHHCCHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHH SRLAPTSLAPTSPRLAPPSSCLAPTSLAPPSPRLAPPSSCLAPTSLAPPSPRLAPPSLAP HHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC PSSRLAPPSPRLAPPSLAPTSLAPPSPRLAPTSLAPPSPRLAPPSLAPPSSRLAPPSPRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APTSLAPPSPRLAPTSPRLAPTSLSYLLPSRPYLLPSISYLLFPTFYLLPPPS CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHEECCCCC >Mature Secondary Structure MRLYSGRLARQSSFYKISSILPLTSHLLSPTSHRLVPTSLAPTSHRLAPTSLAPTSHRLA CCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC PTFSRLAPTSLAPTFSRLAPPSSCLAPTSLAPTSHRLAPPSSCLAPTSLAPTSHRLAPTF HHHHHHCCCHHCCHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHH SRLAPTSLAPTSPRLAPPSSCLAPTSLAPPSPRLAPPSSCLAPTSLAPPSPRLAPPSLAP HHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC PSSRLAPPSPRLAPPSLAPTSLAPPSPRLAPTSLAPPSPRLAPPSLAPPSSRLAPPSPRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APTSLAPPSPRLAPTSPRLAPTSLSYLLPSRPYLLPSISYLLFPTFYLLPPPS CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA