| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526449
Identifier: 222526449
GI number: 222526449
Start: 4014697
End: 4015752
Strand: Direct
Name: 222526449
Synonym: Chy400_3216
Alternate gene names: NA
Gene position: 4014697-4015752 (Clockwise)
Preceding gene: 222526448
Following gene: 222526453
Centisome position: 76.2
GC content: 60.7
Gene sequence:
>1056_bases ATGACGCTGGCCGGTGACGAGTCTACTACAGTCAATCCACTCACGCTGATGGAGTCGGCGCGGGAAAAATACACCCTGGC GCGAGCGCGTCGCGAGGTACCGGAACTGGCCCTGCTCAGCCTGCATGGTGCGATTGAGGATACGTTGCGTGCTCACCTTT TGCGCATCAGATCATCGGCAGCGCTCGGCCCTTTTGCCGGTGTCCTGACGGCGATGCAGACGCTTGATCAGGCGCCACTT AGTCCAGAGGAGGTTGATGCTGTCCAGCGTCTGCATCGACTGCGTGGTCGGATCGCCCGTGGCGAGCATCTGGCGGTGAC CGGTGAGACTCTGGCGGCCTATCAGCGGCTGGCGGTCATGCTGTTACCCCGGTATGGGGTGCAGGTTGTACCGCCAGCCG AACCGGATCGCCCTCGATCAACCCGACCCTTGCAGGCGCGGACAACGCTGCCTGACGATGAGCCGGTGCAGGTACGTCTC CGTGATCGCCATACGCAGTACGATGATGCACGGCGGATCCGGGCACTCGGTGATCGGGGTCTGTCCGATCCGATGGCTCG CAATGAGCGTGTGCCGGTTGTGCCGGGCTGGATTGCTCCCACCTTGATTATTGTGAGCATTTTTGTGATCGGTATGGCAG TTGCCCTCTTCCTGCAAAACCCAACGCCATCGGTGTTGCCGACGGTCACTGTTGGCGGGTTGTCGCCGGTACCGACCGGT CAGGCTCCGGGATTAGCACCAGGCGAAACACCGATTACCGGACAAACGCCGTCGCCTGCATTTGCAGACGTTACGCCAAC CACTGAAGCACCACCAACTGCTGCTCCGACAGGACTGGCAGTTGGAAGGAGAGCGACTGTCAGTAGCGAAATACCTGCTC TCAATGTTCGGGTTGAGCCGGGGACCAATGCGGCAGTTCGAGTTGCTCTGGCACCCGGAACCGAGGTGGAGATTATTGCC GGCCCGGTTGAGCGCGATGGACTGACGTGGTGGCAGGTGCGGAGTGCCGGTATTGAGGGATGGTGTGCCGGAGAGTTGTT ACAACCATTACCGTAA
Upstream 100 bases:
>100_bases AGACAACGGCCATCCAGTTTCTGGTGGGTATGGTCATGCGGGCAACAAAGGGGCAGGCGAATGCCCAGCGGGTACGTGAA TTGTTAGAGGCGGAACTGCA
Downstream 100 bases:
>100_bases ATAGTGGTATAATGGGAAGCCGAACAGTTACGGTATGGTGCGCCGGAGTGGCGAAAAGGCAAACGCTGCGGTCTTAAAAA CCGCTGGGGGAAACCCCTTA
Product: SH3 type 3 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTLAGDESTTVNPLTLMESAREKYTLARARREVPELALLSLHGAIEDTLRAHLLRIRSSAALGPFAGVLTAMQTLDQAPL SPEEVDAVQRLHRLRGRIARGEHLAVTGETLAAYQRLAVMLLPRYGVQVVPPAEPDRPRSTRPLQARTTLPDDEPVQVRL RDRHTQYDDARRIRALGDRGLSDPMARNERVPVVPGWIAPTLIIVSIFVIGMAVALFLQNPTPSVLPTVTVGGLSPVPTG QAPGLAPGETPITGQTPSPAFADVTPTTEAPPTAAPTGLAVGRRATVSSEIPALNVRVEPGTNAAVRVALAPGTEVEIIA GPVERDGLTWWQVRSAGIEGWCAGELLQPLP
Sequences:
>Translated_351_residues MTLAGDESTTVNPLTLMESAREKYTLARARREVPELALLSLHGAIEDTLRAHLLRIRSSAALGPFAGVLTAMQTLDQAPL SPEEVDAVQRLHRLRGRIARGEHLAVTGETLAAYQRLAVMLLPRYGVQVVPPAEPDRPRSTRPLQARTTLPDDEPVQVRL RDRHTQYDDARRIRALGDRGLSDPMARNERVPVVPGWIAPTLIIVSIFVIGMAVALFLQNPTPSVLPTVTVGGLSPVPTG QAPGLAPGETPITGQTPSPAFADVTPTTEAPPTAAPTGLAVGRRATVSSEIPALNVRVEPGTNAAVRVALAPGTEVEIIA GPVERDGLTWWQVRSAGIEGWCAGELLQPLP >Mature_350_residues TLAGDESTTVNPLTLMESAREKYTLARARREVPELALLSLHGAIEDTLRAHLLRIRSSAALGPFAGVLTAMQTLDQAPLS PEEVDAVQRLHRLRGRIARGEHLAVTGETLAAYQRLAVMLLPRYGVQVVPPAEPDRPRSTRPLQARTTLPDDEPVQVRLR DRHTQYDDARRIRALGDRGLSDPMARNERVPVVPGWIAPTLIIVSIFVIGMAVALFLQNPTPSVLPTVTVGGLSPVPTGQ APGLAPGETPITGQTPSPAFADVTPTTEAPPTAAPTGLAVGRRATVSSEIPALNVRVEPGTNAAVRVALAPGTEVEIIAG PVERDGLTWWQVRSAGIEGWCAGELLQPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37465; Mature: 37333
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAGDESTTVNPLTLMESAREKYTLARARREVPELALLSLHGAIEDTLRAHLLRIRSSA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC ALGPFAGVLTAMQTLDQAPLSPEEVDAVQRLHRLRGRIARGEHLAVTGETLAAYQRLAVM CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH LLPRYGVQVVPPAEPDRPRSTRPLQARTTLPDDEPVQVRLRDRHTQYDDARRIRALGDRG HHCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCC LSDPMARNERVPVVPGWIAPTLIIVSIFVIGMAVALFLQNPTPSVLPTVTVGGLSPVPTG CCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCC QAPGLAPGETPITGQTPSPAFADVTPTTEAPPTAAPTGLAVGRRATVSSEIPALNVRVEP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEECC GTNAAVRVALAPGTEVEIIAGPVERDGLTWWQVRSAGIEGWCAGELLQPLP CCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEHHCCCCCEEHHHHHCCCC >Mature Secondary Structure TLAGDESTTVNPLTLMESAREKYTLARARREVPELALLSLHGAIEDTLRAHLLRIRSSA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC ALGPFAGVLTAMQTLDQAPLSPEEVDAVQRLHRLRGRIARGEHLAVTGETLAAYQRLAVM CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH LLPRYGVQVVPPAEPDRPRSTRPLQARTTLPDDEPVQVRLRDRHTQYDDARRIRALGDRG HHCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCC LSDPMARNERVPVVPGWIAPTLIIVSIFVIGMAVALFLQNPTPSVLPTVTVGGLSPVPTG CCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCC QAPGLAPGETPITGQTPSPAFADVTPTTEAPPTAAPTGLAVGRRATVSSEIPALNVRVEP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEECC GTNAAVRVALAPGTEVEIIAGPVERDGLTWWQVRSAGIEGWCAGELLQPLP CCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEHHCCCCCEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA