| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is usf [H]
Identifier: 222526084
GI number: 222526084
Start: 3505826
End: 3506488
Strand: Direct
Name: usf [H]
Synonym: Chy400_2841
Alternate gene names: 222526084
Gene position: 3505826-3506488 (Clockwise)
Preceding gene: 222526083
Following gene: 222526085
Centisome position: 66.54
GC content: 56.71
Gene sequence:
>663_bases ATGACAGTTTCGCAACCCCAGGGCTTTCTCGCCGTCCCAACCACCGGAAACGGACCTGGCGTATTGGTGCTGCATGCCTG GTGGGGGTTAAATGACACCATCAAGATGTACTGCACACAACTTGCCGGGGCCGGTTTCGTAGCCTTCGCCCCAGACCTTT ATCACGGTAAGGTTACCGACAATATCGCCGAGGCGGAAGCTCTTGCCCAGGCGCTCGACGCCAACCATCGCCAGGTCAGG GCCGAGATCGTCCAGGCAACGCGGTTTCTTAGCGAACACGCTGACAAAGCTACCCGTGGCCTGGCAGTGATTGGCTTCTC ACTCGGTGCTTACTATGCGCTTGATCTTTCCGCTACTTGTCCGGAATACATTCGTTCCGTCGTCCTCTTCTATGGCACCG GTCTCGCCGATTTCAGTAACTCAAAGGCGGCCTATCTCGGTCACTTTGCCGCGAATGACCCATTTGAACCGCAAGCCAAC ATCTACAGCCTGGAGGATGCCCTCAAGCAGGCTGGCCGTCCGGTGACGTTCTATCATTACAGTGGCACTGGACACTGGTT CTGTGAACCTGATCGCGATCAGGCGTACAATCCGGCGGCAGCAAGACTGGCCTGGGAGCGAACGCTTCATTTCCTGGAGC GTGGCACGACTGATGACAGTTAA
Upstream 100 bases:
>100_bases AAGACCGTCCGACCGGTGCACGATATAGCGGTAGGCCGTCAGTCGTGCACGTTTTCTTTATCCACAGCACGACCTGTTAC AATCACTGCAGGGAGGCCAC
Downstream 100 bases:
>100_bases GCTGCCATCGGCGCCTATCTACACCTCGCTTGACTGGAGTGGTTGTTATGCGCATCCAGCACCTGGTGGTTGCGGAAGTT ATCCTGCTACACGCTAACTG
Product: dienelactone hydrolase
Products: oxohex-2-enedioate [C]
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTVSQPQGFLAVPTTGNGPGVLVLHAWWGLNDTIKMYCTQLAGAGFVAFAPDLYHGKVTDNIAEAEALAQALDANHRQVR AEIVQATRFLSEHADKATRGLAVIGFSLGAYYALDLSATCPEYIRSVVLFYGTGLADFSNSKAAYLGHFAANDPFEPQAN IYSLEDALKQAGRPVTFYHYSGTGHWFCEPDRDQAYNPAAARLAWERTLHFLERGTTDDS
Sequences:
>Translated_220_residues MTVSQPQGFLAVPTTGNGPGVLVLHAWWGLNDTIKMYCTQLAGAGFVAFAPDLYHGKVTDNIAEAEALAQALDANHRQVR AEIVQATRFLSEHADKATRGLAVIGFSLGAYYALDLSATCPEYIRSVVLFYGTGLADFSNSKAAYLGHFAANDPFEPQAN IYSLEDALKQAGRPVTFYHYSGTGHWFCEPDRDQAYNPAAARLAWERTLHFLERGTTDDS >Mature_219_residues TVSQPQGFLAVPTTGNGPGVLVLHAWWGLNDTIKMYCTQLAGAGFVAFAPDLYHGKVTDNIAEAEALAQALDANHRQVRA EIVQATRFLSEHADKATRGLAVIGFSLGAYYALDLSATCPEYIRSVVLFYGTGLADFSNSKAAYLGHFAANDPFEPQANI YSLEDALKQAGRPVTFYHYSGTGHWFCEPDRDQAYNPAAARLAWERTLHFLERGTTDDS
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994982, Length=237, Percent_Identity=25.3164556962025, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: 3.1.1.45 [C]
Molecular weight: Translated: 24025; Mature: 23894
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSQPQGFLAVPTTGNGPGVLVLHAWWGLNDTIKMYCTQLAGAGFVAFAPDLYHGKVTD CCCCCCCCEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC NIAEAEALAQALDANHRQVRAEIVQATRFLSEHADKATRGLAVIGFSLGAYYALDLSATC HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCC PEYIRSVVLFYGTGLADFSNSKAAYLGHFAANDPFEPQANIYSLEDALKQAGRPVTFYHY HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEHHHHHHHHCCCCEEEEEE SGTGHWFCEPDRDQAYNPAAARLAWERTLHFLERGTTDDS CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TVSQPQGFLAVPTTGNGPGVLVLHAWWGLNDTIKMYCTQLAGAGFVAFAPDLYHGKVTD CCCCCCCEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCC NIAEAEALAQALDANHRQVRAEIVQATRFLSEHADKATRGLAVIGFSLGAYYALDLSATC HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCC PEYIRSVVLFYGTGLADFSNSKAAYLGHFAANDPFEPQANIYSLEDALKQAGRPVTFYHY HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEHHHHHHHHCCCCEEEEEE SGTGHWFCEPDRDQAYNPAAARLAWERTLHFLERGTTDDS CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-carboxymethylenebut-2-en-4-olide; H2O [C]
Specific reaction: 4-carboxymethylenebut-2-en-4-olide + H2O = 4 oxohex-2-enedioate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7592443 [H]