| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526008
Identifier: 222526008
GI number: 222526008
Start: 3407383
End: 3408756
Strand: Direct
Name: 222526008
Synonym: Chy400_2764
Alternate gene names: NA
Gene position: 3407383-3408756 (Clockwise)
Preceding gene: 222526007
Following gene: 222526009
Centisome position: 64.67
GC content: 59.9
Gene sequence:
>1374_bases ATGGCGGATCCCGACAGCATCTTGCAACTTGGTATTGAGGCGGCGCGGAAAGGGGAGAAAGACGAAGCGCGTAGGCTCTT CCGCCTGTTGACCCGTGAACATCCAGAGAATATTCAAGGATGGCTCTGGCTTGCCGGTGTGGCAGCGGATCGCGAAGAGC GGCAAGCTGCACTCGAACAGGTGTTACGCCTCGATCCGCAAAATGAGATGGCTAAAAAGGGATTGCAGGCTCTGGGTGTG ACACCAAAAGCAGCTCCGCCGCCGGCACCGCCATCACCACCACCATCCCCGGCACCAGCTCCCGTATCAACGATGCCCGA TATTGACGAAGACGATCCGTTCGCCCAGCTTGATGCGCTGTCTGAGGTGATGGCGACCGATGCCGGCCCGGTGCGACGCG ATCCGGCAACACCACGACCGGAGACGACAAGTGAGAGTGAGTCGCCTGCATCGACCTCTGCACCGCCGCCCCGTCCGTCA CGTGCTGCTGAACCACCACGAACAAGTCGTCCCAGCACCAGTTGGGCACGGGGCAGTAGCAGTAGCAAGCCGGCGAAACC GGCCCGTAGCGGAGGCTTGTTTGGTGGCCTTTTCCGTCGCTCAGGGCCACCACCGCAGAGGGGAGATGATATGGACGAAG AGACGGTGCCGGCAAAGCGTGGCCTGACCCCATTGACGTTGGTGCTCCTGGCAGTGCTGCTGATCAGTTGTATCGGTCTT GGCTTCATCTTTTTGTCGCAGCGCAATCAGGTGGCGACACCTTCTCCAGCTCAGGCTACATCACAGGCGGCGACCAGTAT TGCGGCCACAACCGAGGCATCGCTGGCACCGACAACACCGACCGAACCCCAGCCTGAACCAACTACGGCACCGACTGAGG AACCGACACCGGAACCAACACCGGAGCCGACACTAGAGCCGATTCCACCAACGCCCGATCCGGCGCTGGCGAACCCGACA CTGGTGAGTCCTGGTACGGAGCTGACCAGTAATGGATGGGCTTACGATTTCAATCAGCCAACCTATGCAGCACCGATTAT TGGTCCACTCAATGGGATTACTCCCAACAACGGTCGCTTCGTGGTTGTGCTGGTGTTTGTCCGTAACACGACCGGTCAGG ATCAGCCGGTACCGCTGGACTTCTTCGTCCTGAAGGATGCCCAGGGTCGGGTGTGGACACCGCGCCTCGATGCGTCTGAT GCGTACCTTATCCGGGGGATCAATGCCGACTTGAGCCATAGCGAGCCGGTGCCTGCTGACGGTTTTGTGCGCAGTGTGGC AATTCTGTTTGATGTCGCCCCCGATGCGACTGATCTGGTCTTCTTTGCGCGCAGCAATCCCGATCAAGGCTGGCTGGTCT TACCTCGCGTGTAG
Upstream 100 bases:
>100_bases AAAATGTGTTGACCATTGCCGGTATCCATGCTAGAATAGGCGCGATTACCACAGAATCCTGATCACTGCCTTGGGGCGGA AGTAGAAGGAAGGACAGGTC
Downstream 100 bases:
>100_bases TTGCGTCGTGTTCGGGGAGGATGGGTGGGGGATTTGACTCCTGACGATCTTGAGCAATGGCTGACCCGCGGCGCGTTAGC AGCGCGCCGCGGTGATTTTG
Product: tetratricopeptide repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MADPDSILQLGIEAARKGEKDEARRLFRLLTREHPENIQGWLWLAGVAADREERQAALEQVLRLDPQNEMAKKGLQALGV TPKAAPPPAPPSPPPSPAPAPVSTMPDIDEDDPFAQLDALSEVMATDAGPVRRDPATPRPETTSESESPASTSAPPPRPS RAAEPPRTSRPSTSWARGSSSSKPAKPARSGGLFGGLFRRSGPPPQRGDDMDEETVPAKRGLTPLTLVLLAVLLISCIGL GFIFLSQRNQVATPSPAQATSQAATSIAATTEASLAPTTPTEPQPEPTTAPTEEPTPEPTPEPTLEPIPPTPDPALANPT LVSPGTELTSNGWAYDFNQPTYAAPIIGPLNGITPNNGRFVVVLVFVRNTTGQDQPVPLDFFVLKDAQGRVWTPRLDASD AYLIRGINADLSHSEPVPADGFVRSVAILFDVAPDATDLVFFARSNPDQGWLVLPRV
Sequences:
>Translated_457_residues MADPDSILQLGIEAARKGEKDEARRLFRLLTREHPENIQGWLWLAGVAADREERQAALEQVLRLDPQNEMAKKGLQALGV TPKAAPPPAPPSPPPSPAPAPVSTMPDIDEDDPFAQLDALSEVMATDAGPVRRDPATPRPETTSESESPASTSAPPPRPS RAAEPPRTSRPSTSWARGSSSSKPAKPARSGGLFGGLFRRSGPPPQRGDDMDEETVPAKRGLTPLTLVLLAVLLISCIGL GFIFLSQRNQVATPSPAQATSQAATSIAATTEASLAPTTPTEPQPEPTTAPTEEPTPEPTPEPTLEPIPPTPDPALANPT LVSPGTELTSNGWAYDFNQPTYAAPIIGPLNGITPNNGRFVVVLVFVRNTTGQDQPVPLDFFVLKDAQGRVWTPRLDASD AYLIRGINADLSHSEPVPADGFVRSVAILFDVAPDATDLVFFARSNPDQGWLVLPRV >Mature_456_residues ADPDSILQLGIEAARKGEKDEARRLFRLLTREHPENIQGWLWLAGVAADREERQAALEQVLRLDPQNEMAKKGLQALGVT PKAAPPPAPPSPPPSPAPAPVSTMPDIDEDDPFAQLDALSEVMATDAGPVRRDPATPRPETTSESESPASTSAPPPRPSR AAEPPRTSRPSTSWARGSSSSKPAKPARSGGLFGGLFRRSGPPPQRGDDMDEETVPAKRGLTPLTLVLLAVLLISCIGLG FIFLSQRNQVATPSPAQATSQAATSIAATTEASLAPTTPTEPQPEPTTAPTEEPTPEPTPEPTLEPIPPTPDPALANPTL VSPGTELTSNGWAYDFNQPTYAAPIIGPLNGITPNNGRFVVVLVFVRNTTGQDQPVPLDFFVLKDAQGRVWTPRLDASDA YLIRGINADLSHSEPVPADGFVRSVAILFDVAPDATDLVFFARSNPDQGWLVLPRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48601; Mature: 48470
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPDSILQLGIEAARKGEKDEARRLFRLLTREHPENIQGWLWLAGVAADREERQAALEQ CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCHHHHHHHHHH VLRLDPQNEMAKKGLQALGVTPKAAPPPAPPSPPPSPAPAPVSTMPDIDEDDPFAQLDAL HHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH SEVMATDAGPVRRDPATPRPETTSESESPASTSAPPPRPSRAAEPPRTSRPSTSWARGSS HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC SSKPAKPARSGGLFGGLFRRSGPPPQRGDDMDEETVPAKRGLTPLTLVLLAVLLISCIGL CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHH GFIFLSQRNQVATPSPAQATSQAATSIAATTEASLAPTTPTEPQPEPTTAPTEEPTPEPT HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEPTLEPIPPTPDPALANPTLVSPGTELTSNGWAYDFNQPTYAAPIIGPLNGITPNNGRF CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCE VVVLVFVRNTTGQDQPVPLDFFVLKDAQGRVWTPRLDASDAYLIRGINADLSHSEPVPAD EEEEEEEECCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCH GFVRSVAILFDVAPDATDLVFFARSNPDQGWLVLPRV HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEECCC >Mature Secondary Structure ADPDSILQLGIEAARKGEKDEARRLFRLLTREHPENIQGWLWLAGVAADREERQAALEQ CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCHHHHHHHHHH VLRLDPQNEMAKKGLQALGVTPKAAPPPAPPSPPPSPAPAPVSTMPDIDEDDPFAQLDAL HHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH SEVMATDAGPVRRDPATPRPETTSESESPASTSAPPPRPSRAAEPPRTSRPSTSWARGSS HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC SSKPAKPARSGGLFGGLFRRSGPPPQRGDDMDEETVPAKRGLTPLTLVLLAVLLISCIGL CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHCCHHHCCCHHHHHHHHHHHHHHHHH GFIFLSQRNQVATPSPAQATSQAATSIAATTEASLAPTTPTEPQPEPTTAPTEEPTPEPT HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEPTLEPIPPTPDPALANPTLVSPGTELTSNGWAYDFNQPTYAAPIIGPLNGITPNNGRF CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCE VVVLVFVRNTTGQDQPVPLDFFVLKDAQGRVWTPRLDASDAYLIRGINADLSHSEPVPAD EEEEEEEECCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCH GFVRSVAILFDVAPDATDLVFFARSNPDQGWLVLPRV HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA