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The map label for this gene is vdlD [H]

Identifier: 222525946

GI number: 222525946

Start: 3334023

End: 3334565

Strand: Direct

Name: vdlD [H]

Synonym: Chy400_2702

Alternate gene names: 222525946

Gene position: 3334023-3334565 (Clockwise)

Preceding gene: 222525945

Following gene: 222525947

Centisome position: 63.28

GC content: 56.54

Gene sequence:

>543_bases
ATGCAGCCCTCTCATGAGCAGCCACAGCCGGAACAGTTCCGTACCCTACAGATGACGGTGTTGATGACTCCTGATATGGC
TAATTTTGCCGGTAACGTGCATGGCGGCCATATTCTGAAGCTGCTCGATCAGGTAGCGTATGCCTGCGCCTCACGGTATT
CTGGTCGCTACGTGGTTACGGTGTCGGTCGACCAGGTGATCTTTCGCGCCCGGATTCACGTTGGCGAGCTGGTGACGTTT
CTGGCGTCGATCAACTACACCGGCAATACCTCGATGGAGGTTGGGATTCGCGTCGTCGCCGAAAATATTACCGCCCGTAC
TCAACGTCACGTTATGACCTGCTATTTTACGATGGTGGCGGTTGATGAGAATTTCCGCCCCTGCCCCGTCCCACCTGTGC
GTATCGAAACCGCCGAGCAACGGCGGCGCTGGATGGCCGCTCGCCTGCGCAGAGAGTTGCGCCGCGAGATCGAACAGCGC
AGCCTGGAGATTCGTCAACATCCAGAAGATTTTCTCAATGAGCTGGATAGTGAGCCGCATTAG

Upstream 100 bases:

>100_bases
CGAGAAGTGATCTATATTAATGCCGTTGCCGGGAAGTATCTCAGGTACGTATACTTGAAAAACAGGAAAAAACTTTGGTA
CCTGGAATACGGAGCGATGT

Downstream 100 bases:

>100_bases
CAGCCATCCCTGGCGCAATCACGCGCTGGACTGGCTACCTGCCACGCCCGGTTATGCACAGTTTGTGTCGTTTAGCATAG
GTGGTGTTCGCTACCCCACT

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MQPSHEQPQPEQFRTLQMTVLMTPDMANFAGNVHGGHILKLLDQVAYACASRYSGRYVVTVSVDQVIFRARIHVGELVTF
LASINYTGNTSMEVGIRVVAENITARTQRHVMTCYFTMVAVDENFRPCPVPPVRIETAEQRRRWMAARLRRELRREIEQR
SLEIRQHPEDFLNELDSEPH

Sequences:

>Translated_180_residues
MQPSHEQPQPEQFRTLQMTVLMTPDMANFAGNVHGGHILKLLDQVAYACASRYSGRYVVTVSVDQVIFRARIHVGELVTF
LASINYTGNTSMEVGIRVVAENITARTQRHVMTCYFTMVAVDENFRPCPVPPVRIETAEQRRRWMAARLRRELRREIEQR
SLEIRQHPEDFLNELDSEPH
>Mature_180_residues
MQPSHEQPQPEQFRTLQMTVLMTPDMANFAGNVHGGHILKLLDQVAYACASRYSGRYVVTVSVDQVIFRARIHVGELVTF
LASINYTGNTSMEVGIRVVAENITARTQRHVMTCYFTMVAVDENFRPCPVPPVRIETAEQRRRWMAARLRRELRREIEQR
SLEIRQHPEDFLNELDSEPH

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI32528286, Length=147, Percent_Identity=30.6122448979592, Blast_Score=81, Evalue=6e-16,
Organism=Homo sapiens, GI32528284, Length=147, Percent_Identity=30.6122448979592, Blast_Score=81, Evalue=6e-16,
Organism=Homo sapiens, GI75709208, Length=147, Percent_Identity=30.6122448979592, Blast_Score=81, Evalue=6e-16,
Organism=Homo sapiens, GI32528282, Length=147, Percent_Identity=30.6122448979592, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI22165355, Length=105, Percent_Identity=37.1428571428571, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI22165400, Length=105, Percent_Identity=37.1428571428571, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI18640736, Length=153, Percent_Identity=27.4509803921569, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 20822; Mature: 20822

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPSHEQPQPEQFRTLQMTVLMTPDMANFAGNVHGGHILKLLDQVAYACASRYSGRYVVT
CCCCCCCCCHHHHHEEEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
VSVDQVIFRARIHVGELVTFLASINYTGNTSMEVGIRVVAENITARTQRHVMTCYFTMVA
EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
VDENFRPCPVPPVRIETAEQRRRWMAARLRRELRREIEQRSLEIRQHPEDFLNELDSEPH
ECCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure
MQPSHEQPQPEQFRTLQMTVLMTPDMANFAGNVHGGHILKLLDQVAYACASRYSGRYVVT
CCCCCCCCCHHHHHEEEEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
VSVDQVIFRARIHVGELVTFLASINYTGNTSMEVGIRVVAENITARTQRHVMTCYFTMVA
EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
VDENFRPCPVPPVRIETAEQRRRWMAARLRRELRREIEQRSLEIRQHPEDFLNELDSEPH
ECCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]