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The map label for this gene is trpH [H]

Identifier: 222525917

GI number: 222525917

Start: 3304266

End: 3305087

Strand: Direct

Name: trpH [H]

Synonym: Chy400_2672

Alternate gene names: 222525917

Gene position: 3304266-3305087 (Clockwise)

Preceding gene: 222525916

Following gene: 222525918

Centisome position: 62.71

GC content: 58.03

Gene sequence:

>822_bases
ATGATCGATTTACACATTCACACAAATGCAACACCTCATCACGCAACCTGGACACCGGTAGCATTGGCGGTTGCAGCGGC
AGCCCAGGGTCTGACCATGATCGCGGTGACCGACCATAACACGACAGCCAATGTGATTACCACGGCCATGGCCGGCATGC
ATTACGGGGTTCAGGTGGTGAGTGGGGTTGAAATTGATAGTGCCTTCAATGGTAAATTGTGGCATACGCTTGTCTACGCG
GTTGATCCGGAGGCACCGTTACTGCTCGACCTGTGCGCCGAGGTGGTTCATCGCAATGCTGCCGATGCTGCGCAGTTGTT
GCGTGATCTGGCGGCTGCCGGTTTTGTCATGCCCGGTCTGAGTGATCGTGATCGACCGCCAACCGTCGCCGATGTGGCAT
TGGTGTTGGCCCGCCACAATGAATTACCGGGCCGGGTGGCCGGTGAAGGCGATGAAGAGGCCGGTATGCGCTTTATCCTG
ACCCATTTCGCTGCTGCCTACCGACCACTCAGCGTCCAAGAGGTGATCGGGGTGGCACATGATCTGGGGGGGCTGGCAGT
ACTGGCGCATCCCGGACGGAGCAAAGGCATCTATGCAATACCGGCGACTGATGAAGATATTGCAGCTATGGCCGCGGTTG
GTTTGGATGGGATCGAAGTCTTCTATCCAACGCACGACGCAGCCACCCGTGAGCGCCTGCTGGCTGCGGCGGCACGTCAC
GGCTTGCTGGTTTCTGGGGGGAGTGACTCGCATCATCCCCATCAGACGCTGGCTAGCTGGCCGCGAACTGATGTAACGAT
CATCGACTATCTCAGCAGGTAA

Upstream 100 bases:

>100_bases
GGGGGGCGCAAATCTTTCGCGATCTCGGTTACGGGCCGGTAGCAGCGCTCGACGGTGGGATTGAAGCGTGGCAGGCGGCT
AATCTGCCATTGGAGCAACC

Downstream 100 bases:

>100_bases
TCATGAAACACCATCGCAAAGACACAATGGATTGGCGAGAAGCTTTGTCTCGCCTTCCAGCGCATCATCAAGCCGAAGTT
GTCGATCTCGTTGCGGCGTA

Product: PHP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MIDLHIHTNATPHHATWTPVALAVAAAAQGLTMIAVTDHNTTANVITTAMAGMHYGVQVVSGVEIDSAFNGKLWHTLVYA
VDPEAPLLLDLCAEVVHRNAADAAQLLRDLAAAGFVMPGLSDRDRPPTVADVALVLARHNELPGRVAGEGDEEAGMRFIL
THFAAAYRPLSVQEVIGVAHDLGGLAVLAHPGRSKGIYAIPATDEDIAAMAAVGLDGIEVFYPTHDAATRERLLAAAARH
GLLVSGGSDSHHPHQTLASWPRTDVTIIDYLSR

Sequences:

>Translated_273_residues
MIDLHIHTNATPHHATWTPVALAVAAAAQGLTMIAVTDHNTTANVITTAMAGMHYGVQVVSGVEIDSAFNGKLWHTLVYA
VDPEAPLLLDLCAEVVHRNAADAAQLLRDLAAAGFVMPGLSDRDRPPTVADVALVLARHNELPGRVAGEGDEEAGMRFIL
THFAAAYRPLSVQEVIGVAHDLGGLAVLAHPGRSKGIYAIPATDEDIAAMAAVGLDGIEVFYPTHDAATRERLLAAAARH
GLLVSGGSDSHHPHQTLASWPRTDVTIIDYLSR
>Mature_273_residues
MIDLHIHTNATPHHATWTPVALAVAAAAQGLTMIAVTDHNTTANVITTAMAGMHYGVQVVSGVEIDSAFNGKLWHTLVYA
VDPEAPLLLDLCAEVVHRNAADAAQLLRDLAAAGFVMPGLSDRDRPPTVADVALVLARHNELPGRVAGEGDEEAGMRFIL
THFAAAYRPLSVQEVIGVAHDLGGLAVLAHPGRSKGIYAIPATDEDIAAMAAVGLDGIEVFYPTHDAATRERLLAAAARH
GLLVSGGSDSHHPHQTLASWPRTDVTIIDYLSR

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=265, Percent_Identity=29.0566037735849, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 28828; Mature: 28828

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLHIHTNATPHHATWTPVALAVAAAAQGLTMIAVTDHNTTANVITTAMAGMHYGVQVV
CEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHCEEEE
SGVEIDSAFNGKLWHTLVYAVDPEAPLLLDLCAEVVHRNAADAAQLLRDLAAAGFVMPGL
ECCEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCEECCCC
SDRDRPPTVADVALVLARHNELPGRVAGEGDEEAGMRFILTHFAAAYRPLSVQEVIGVAH
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
DLGGLAVLAHPGRSKGIYAIPATDEDIAAMAAVGLDGIEVFYPTHDAATRERLLAAAARH
CCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHC
GLLVSGGSDSHHPHQTLASWPRTDVTIIDYLSR
CEEEECCCCCCCCHHHHHHCCCCCCHHHHHHCC
>Mature Secondary Structure
MIDLHIHTNATPHHATWTPVALAVAAAAQGLTMIAVTDHNTTANVITTAMAGMHYGVQVV
CEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHCEEEE
SGVEIDSAFNGKLWHTLVYAVDPEAPLLLDLCAEVVHRNAADAAQLLRDLAAAGFVMPGL
ECCEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCEECCCC
SDRDRPPTVADVALVLARHNELPGRVAGEGDEEAGMRFILTHFAAAYRPLSVQEVIGVAH
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
DLGGLAVLAHPGRSKGIYAIPATDEDIAAMAAVGLDGIEVFYPTHDAATRERLLAAAARH
CCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHC
GLLVSGGSDSHHPHQTLASWPRTDVTIIDYLSR
CEEEECCCCCCCCHHHHHHCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]