| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525911
Identifier: 222525911
GI number: 222525911
Start: 3296370
End: 3297677
Strand: Direct
Name: 222525911
Synonym: Chy400_2666
Alternate gene names: NA
Gene position: 3296370-3297677 (Clockwise)
Preceding gene: 222525910
Following gene: 222525916
Centisome position: 62.56
GC content: 58.94
Gene sequence:
>1308_bases ATGGAGCAGACCGTGACTCAACAACTCTGGATTTACATCGATGAGGGAGATAGCTTGCAAGGCCGTACCGTCGCTTCCCG TATTGTCGATACGCTGCGGGCTGCCGGTGCACCGGGGGTGACCGTGTTTCGTGGGGCTGGGGGGTACGGTACCCACGGGG TCTTTCACAGCGATCTCCTGGTTGATATTCCAAGCCGGTTGCCGTTGGTGATCACCTGCATTGATCGGAGTGACCGCTTA CAACGGTTGTTGCCCAAACTTAGCGAGCTGGTGCAAGAGGGTTTGATCGTGCTTTCGCCGGTGCAGGTCGTGAAGGTAGC GAGGCGGACTGGAAGTGCTCTTCCTGCTCATCTCAGGGTAGCCGATGTGATGAATCACGACGTTATCTCCGTCACATCCG AAACATCGGTAGGCGAGCTGGTACGTCTGCTACTCGAACGCGGTTTGCGGGCAATGCCGGTGGTTGATGCCGAACGTCGT GTGATCGGTATTGTTACTGATGCCGATCTGCTCCAGCGTGGGGTGAGCCAGTTGCCACTGCATTTGCAGCAGTTACTACC CGGCGCCGAGCGTGCGGCTCATCTGGCAGCAGTGGCTGCTCGTCCCGAACGGGCCGCTGATGTAATGACCCCCAACCCTA CTACCATTCCTGCGACAGCTTCGCTTACCCAGGCTGCCCTGCTCATGACAGAGCATGATCACAAGCGCTTACCGGTAGTT GATGAAGCCGGACGCCTGGTTGGGATGTTGAGCCGATCCGATCTGTTGCAGACGGTGGCGAATACGTTCGCCTCAAGCAG TGAGGTTCTGCCGGGTTCAATACTCACCACTGCCAAAACCGTTGGAGAGGTCATGATTCGCGATGTACCGACAGTTACAC CGGAAACGCCCCTCGCTGAGACACTCGACCGTATTCTTTCGACACCCCGACGGCGGGTGGTTGTTGTCGATCAGAATCGG CGTGTCGTCGGTATCATCAGCGACGGTGATATTCTCCGCCGGGCGGCTCGTCCGGTAGCACCGGGATTGTTACAGCGCTT TGCGGTCTGGATCGGTGGCGGTGCCCGTCCGCCAGAGCTGGAGCTGGCGCTCAAGAATCTGACGGCGGCAGCAGTGATGA CCAGCCCGGTGCTGACGGTGAATCCCGACACGCCGATTATCAGTGCCGTTGAGCTGATGATCGAACGGCGTATCAAGCGT TTGCCGGTGGTTGATGAAGAAGGCAGGCTGGTGGGAATGGTCGGGCGAGCGGCGCTGTTGGGGGCGTTGTTGGGTTCTGG TGGTGAGGGGGGGCAGGAACGGGAGTAG
Upstream 100 bases:
>100_bases TAGGCTACATGGTAGGAAGCGTTGTCGGCGGCCTGATTGCCGTTATCATCGGCGTCGGCTTAGGTCGGTGGTTTGGTGGC TAGCAGAGAGGAGGTCTCCA
Downstream 100 bases:
>100_bases GGATGGCCTGGCACATTTTGCGGTGCAAGCGCGCCAGGCCAGCCGTGAAAAGCAAGAGTTCACCAAACCCAAAGCGAGGA GCCTCTACGGCTCCTCGCTT
Product: CBS domain-containing membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MEQTVTQQLWIYIDEGDSLQGRTVASRIVDTLRAAGAPGVTVFRGAGGYGTHGVFHSDLLVDIPSRLPLVITCIDRSDRL QRLLPKLSELVQEGLIVLSPVQVVKVARRTGSALPAHLRVADVMNHDVISVTSETSVGELVRLLLERGLRAMPVVDAERR VIGIVTDADLLQRGVSQLPLHLQQLLPGAERAAHLAAVAARPERAADVMTPNPTTIPATASLTQAALLMTEHDHKRLPVV DEAGRLVGMLSRSDLLQTVANTFASSSEVLPGSILTTAKTVGEVMIRDVPTVTPETPLAETLDRILSTPRRRVVVVDQNR RVVGIISDGDILRRAARPVAPGLLQRFAVWIGGGARPPELELALKNLTAAAVMTSPVLTVNPDTPIISAVELMIERRIKR LPVVDEEGRLVGMVGRAALLGALLGSGGEGGQERE
Sequences:
>Translated_435_residues MEQTVTQQLWIYIDEGDSLQGRTVASRIVDTLRAAGAPGVTVFRGAGGYGTHGVFHSDLLVDIPSRLPLVITCIDRSDRL QRLLPKLSELVQEGLIVLSPVQVVKVARRTGSALPAHLRVADVMNHDVISVTSETSVGELVRLLLERGLRAMPVVDAERR VIGIVTDADLLQRGVSQLPLHLQQLLPGAERAAHLAAVAARPERAADVMTPNPTTIPATASLTQAALLMTEHDHKRLPVV DEAGRLVGMLSRSDLLQTVANTFASSSEVLPGSILTTAKTVGEVMIRDVPTVTPETPLAETLDRILSTPRRRVVVVDQNR RVVGIISDGDILRRAARPVAPGLLQRFAVWIGGGARPPELELALKNLTAAAVMTSPVLTVNPDTPIISAVELMIERRIKR LPVVDEEGRLVGMVGRAALLGALLGSGGEGGQERE >Mature_435_residues MEQTVTQQLWIYIDEGDSLQGRTVASRIVDTLRAAGAPGVTVFRGAGGYGTHGVFHSDLLVDIPSRLPLVITCIDRSDRL QRLLPKLSELVQEGLIVLSPVQVVKVARRTGSALPAHLRVADVMNHDVISVTSETSVGELVRLLLERGLRAMPVVDAERR VIGIVTDADLLQRGVSQLPLHLQQLLPGAERAAHLAAVAARPERAADVMTPNPTTIPATASLTQAALLMTEHDHKRLPVV DEAGRLVGMLSRSDLLQTVANTFASSSEVLPGSILTTAKTVGEVMIRDVPTVTPETPLAETLDRILSTPRRRVVVVDQNR RVVGIISDGDILRRAARPVAPGLLQRFAVWIGGGARPPELELALKNLTAAAVMTSPVLTVNPDTPIISAVELMIERRIKR LPVVDEEGRLVGMVGRAALLGALLGSGGEGGQERE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0166 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003793 - InterPro: IPR011322 - InterPro: IPR015867 [H]
Pfam domain/function: PF02641 DUF190 [H]
EC number: NA
Molecular weight: Translated: 46595; Mature: 46595
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQTVTQQLWIYIDEGDSLQGRTVASRIVDTLRAAGAPGVTVFRGAGGYGTHGVFHSDLL CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEECCHHH VDIPSRLPLVITCIDRSDRLQRLLPKLSELVQEGLIVLSPVQVVKVARRTGSALPAHLRV EECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCCHHHHH ADVMNHDVISVTSETSVGELVRLLLERGLRAMPVVDAERRVIGIVTDADLLQRGVSQLPL HHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHH HLQQLLPGAERAAHLAAVAARPERAADVMTPNPTTIPATASLTQAALLMTEHDHKRLPVV HHHHHCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCH DEAGRLVGMLSRSDLLQTVANTFASSSEVLPGSILTTAKTVGEVMIRDVPTVTPETPLAE HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH TLDRILSTPRRRVVVVDQNRRVVGIISDGDILRRAARPVAPGLLQRFAVWIGGGARPPEL HHHHHHCCCCCEEEEEECCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH ELALKNLTAAAVMTSPVLTVNPDTPIISAVELMIERRIKRLPVVDEEGRLVGMVGRAALL HHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHH GALLGSGGEGGQERE HHHHCCCCCCCCCCC >Mature Secondary Structure MEQTVTQQLWIYIDEGDSLQGRTVASRIVDTLRAAGAPGVTVFRGAGGYGTHGVFHSDLL CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEECCHHH VDIPSRLPLVITCIDRSDRLQRLLPKLSELVQEGLIVLSPVQVVKVARRTGSALPAHLRV EECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCCHHHHH ADVMNHDVISVTSETSVGELVRLLLERGLRAMPVVDAERRVIGIVTDADLLQRGVSQLPL HHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHH HLQQLLPGAERAAHLAAVAARPERAADVMTPNPTTIPATASLTQAALLMTEHDHKRLPVV HHHHHCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCH DEAGRLVGMLSRSDLLQTVANTFASSSEVLPGSILTTAKTVGEVMIRDVPTVTPETPLAE HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH TLDRILSTPRRRVVVVDQNRRVVGIISDGDILRRAARPVAPGLLQRFAVWIGGGARPPEL HHHHHHCCCCCEEEEEECCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH ELALKNLTAAAVMTSPVLTVNPDTPIISAVELMIERRIKRLPVVDEEGRLVGMVGRAALL HHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHH GALLGSGGEGGQERE HHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]