| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525897
Identifier: 222525897
GI number: 222525897
Start: 3280461
End: 3281099
Strand: Direct
Name: 222525897
Synonym: Chy400_2650
Alternate gene names: NA
Gene position: 3280461-3281099 (Clockwise)
Preceding gene: 222525896
Following gene: 222525898
Centisome position: 62.26
GC content: 57.12
Gene sequence:
>639_bases ATGAGCAAGGTATTCGTCAACATTAGCCTCAGCCTCGACGGCTTCATGGCGCCGGAAGGTATGGACATGGCGCATTTCAG CGACCCAACCTACAAAAACTGGGGCGCGAAATGGGGTGCACTGATGGCCTGGGCGCTCAGTCAACAGTATCTGCGCGAGA AGCTAAAACTGGGAACTGGAGGTGAGACTGGCCCGGTTAACGACATGGTGCGTCACACCTTCGAGCGCACTGGCGCCCAT ATCATGGGCAAGCGCATGTTTGAAGGTGGTGAACGTGGATGGCCCGAAGAAGCGCCGTTTCACACGCCTGTGTACGTACT GACGCACGAGCGCCGCAATCCCTGGGTACGTCCGGGTGGAACCACATTCTACTTTGTCAATGACGGCCCAGAACAGGCTC TGGCGCTGGCACGGGAAGCGGCAGGAGAGCGTGACATCCGCATTTCCGGTGGTGCAAATGTTATCCAGCAGTACCTGAAC CTGGGTTTGGTTGATGAGCTGGAAATCGCTTTGATCCCGGTCATATTCGGCGGTGGACGGCGTCTGTTCGAGAACCTGCA TGAGCCGCTACCGCAGTTTCGGATTGACAGAGTGCTTGCAAGCCCTACTGCGACGCACCTGCGCTATGTTCGTCTGTGA
Upstream 100 bases:
>100_bases CGGTCGCCGCCTCATTGCCGGCGGTTTCACCCCCATGCTGATCGAGGCGAATAAGGACTGAGTGACATCGGATCGCTATC CTACATCCAGGAGGAACATT
Downstream 100 bases:
>100_bases AAGGGAGGGCTATGCCGGTTAATCGTGGTACACCAGGACTATTTGTTTGACTAAAGGGTAGCAGTGAGCCGGGTAAGTTA ACCCATCTCGAAACAGCCAG
Product: bifunctional deaminase-reductase domain-containing protein
Products: NA
Alternate protein names: Deaminase-Reductase Domain-Containing Protein; Bifunctional Deaminase-Reductase Domain-Containing Protein; Bifunctional Deaminase-Reductase-Like; Dihydrofolate Reductase; Riboflavin Biosynthesis Protein RibD; Bifunctional Deaminase-Reductase-Like Protein; Riboflavin Biosynthesis Protein; Dihydrofolate Reductase Protein; Deaminase/Reductase; Deaminase-Reductase; RibD Domain-Containing Protein; 5-Amino-6-(5-Phosphoribosylamino)Uracil Reductase; Riboflavin Biosynthesis Protein RibD Domain Protein; Bifunctional Deaminase-Reductase C-Terminal
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSKVFVNISLSLDGFMAPEGMDMAHFSDPTYKNWGAKWGALMAWALSQQYLREKLKLGTGGETGPVNDMVRHTFERTGAH IMGKRMFEGGERGWPEEAPFHTPVYVLTHERRNPWVRPGGTTFYFVNDGPEQALALAREAAGERDIRISGGANVIQQYLN LGLVDELEIALIPVIFGGGRRLFENLHEPLPQFRIDRVLASPTATHLRYVRL
Sequences:
>Translated_212_residues MSKVFVNISLSLDGFMAPEGMDMAHFSDPTYKNWGAKWGALMAWALSQQYLREKLKLGTGGETGPVNDMVRHTFERTGAH IMGKRMFEGGERGWPEEAPFHTPVYVLTHERRNPWVRPGGTTFYFVNDGPEQALALAREAAGERDIRISGGANVIQQYLN LGLVDELEIALIPVIFGGGRRLFENLHEPLPQFRIDRVLASPTATHLRYVRL >Mature_211_residues SKVFVNISLSLDGFMAPEGMDMAHFSDPTYKNWGAKWGALMAWALSQQYLREKLKLGTGGETGPVNDMVRHTFERTGAHI MGKRMFEGGERGWPEEAPFHTPVYVLTHERRNPWVRPGGTTFYFVNDGPEQALALAREAAGERDIRISGGANVIQQYLNL GLVDELEIALIPVIFGGGRRLFENLHEPLPQFRIDRVLASPTATHLRYVRL
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23838; Mature: 23706
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVFVNISLSLDGFMAPEGMDMAHFSDPTYKNWGAKWGALMAWALSQQYLREKLKLGTG CCEEEEEEEEEECCEECCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GETGPVNDMVRHTFERTGAHIMGKRMFEGGERGWPEEAPFHTPVYVLTHERRNPWVRPGG CCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC TTFYFVNDGPEQALALAREAAGERDIRISGGANVIQQYLNLGLVDELEIALIPVIFGGGR CEEEEECCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCCCCCCEEEEEEEECCCH RLFENLHEPLPQFRIDRVLASPTATHLRYVRL HHHHHHHCCCHHHHHHHHHCCCCHHHEEEECC >Mature Secondary Structure SKVFVNISLSLDGFMAPEGMDMAHFSDPTYKNWGAKWGALMAWALSQQYLREKLKLGTG CEEEEEEEEEECCEECCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GETGPVNDMVRHTFERTGAHIMGKRMFEGGERGWPEEAPFHTPVYVLTHERRNPWVRPGG CCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC TTFYFVNDGPEQALALAREAAGERDIRISGGANVIQQYLNLGLVDELEIALIPVIFGGGR CEEEEECCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCCCCCCEEEEEEEECCCH RLFENLHEPLPQFRIDRVLASPTATHLRYVRL HHHHHHHCCCHHHHHHHHHCCCCHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA