| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525888
Identifier: 222525888
GI number: 222525888
Start: 3274789
End: 3275343
Strand: Direct
Name: 222525888
Synonym: Chy400_2641
Alternate gene names: NA
Gene position: 3274789-3275343 (Clockwise)
Preceding gene: 222525887
Following gene: 222525889
Centisome position: 62.15
GC content: 56.04
Gene sequence:
>555_bases ATGCGGGAATTGGTGTTCATTCACGGTGCTGGCGGTGCAGTCGACGATCCAGAATTCGGCAGCCAGGAGCTCATTGCATT CCTGAGAAGGGAGCTCGCTCAGGATTATCGGATACGCGCGCCGTTCATGCCTAGTCCTGAGGAGCCACACGCCATTGAGT GGCTGGACGCCCTCGACACGGAGCTGGTCAATTTCCCTGACGACGGCGTCTTGGTTGGCCATTCGATGGGTGGTGCCATG ATTCTCGAGTTCGTTGCTGAGAGAAGACAATCTTTAGCGGCATCGGGTCTTGTCATGATAGCATGTCCATTTTGGGGTGA GCCGGATTGGAAGGTTGAGGAATTCTACTTGCCGGACGGATTCGCTGATCGATTATCGGGGCTGAAACGCATCCTTCTCT ATCACAGCCGCGATGACTCGATCGTGCCTTTCGCGCACATGGCCGTCTACCACAAACACATCCCGCGCGCAGAACGCCAT GAAGTCGACGGGGCGGGTCATGCCTTTGCGCGAGGAGACCGTCGCGTTGTTGTCAGTGGTATTAGATCCCTTTAG
Upstream 100 bases:
>100_bases CCGCCGCTGAACCGGAGCGTTAGAATGCACGAAACGGTTCTTCGCGCTGAAGTCCTTTATGCGTCCCGTCCGGATTGTGA GACAGGCTAGGAGTGATCTA
Downstream 100 bases:
>100_bases GTTAAGTCACCTTTGGGGGTACCTCCTGCGTTTCTGCTTAGGACAGACGTGTATTCTAACAAGGGCATGCACCTGACGGG CTTCGCCCGCAGGTGATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MRELVFIHGAGGAVDDPEFGSQELIAFLRRELAQDYRIRAPFMPSPEEPHAIEWLDALDTELVNFPDDGVLVGHSMGGAM ILEFVAERRQSLAASGLVMIACPFWGEPDWKVEEFYLPDGFADRLSGLKRILLYHSRDDSIVPFAHMAVYHKHIPRAERH EVDGAGHAFARGDRRVVVSGIRSL
Sequences:
>Translated_184_residues MRELVFIHGAGGAVDDPEFGSQELIAFLRRELAQDYRIRAPFMPSPEEPHAIEWLDALDTELVNFPDDGVLVGHSMGGAM ILEFVAERRQSLAASGLVMIACPFWGEPDWKVEEFYLPDGFADRLSGLKRILLYHSRDDSIVPFAHMAVYHKHIPRAERH EVDGAGHAFARGDRRVVVSGIRSL >Mature_184_residues MRELVFIHGAGGAVDDPEFGSQELIAFLRRELAQDYRIRAPFMPSPEEPHAIEWLDALDTELVNFPDDGVLVGHSMGGAM ILEFVAERRQSLAASGLVMIACPFWGEPDWKVEEFYLPDGFADRLSGLKRILLYHSRDDSIVPFAHMAVYHKHIPRAERH EVDGAGHAFARGDRRVVVSGIRSL
Specific function: Unknown
COG id: COG3545
COG function: function code R; Predicted esterase of the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20650; Mature: 20650
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELVFIHGAGGAVDDPEFGSQELIAFLRRELAQDYRIRAPFMPSPEEPHAIEWLDALDT CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHH ELVNFPDDGVLVGHSMGGAMILEFVAERRQSLAASGLVMIACPFWGEPDWKVEEFYLPDG HHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCC FADRLSGLKRILLYHSRDDSIVPFAHMAVYHKHIPRAERHEVDGAGHAFARGDRRVVVSG HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCHHHCCCCCEEHHH IRSL HHCC >Mature Secondary Structure MRELVFIHGAGGAVDDPEFGSQELIAFLRRELAQDYRIRAPFMPSPEEPHAIEWLDALDT CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHH ELVNFPDDGVLVGHSMGGAMILEFVAERRQSLAASGLVMIACPFWGEPDWKVEEFYLPDG HHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCC FADRLSGLKRILLYHSRDDSIVPFAHMAVYHKHIPRAERHEVDGAGHAFARGDRRVVVSG HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCHHHCCCCCEEHHH IRSL HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA