Click here to switch to the map view.

The map label for this gene is 222525859

Identifier: 222525859

GI number: 222525859

Start: 3248958

End: 3249620

Strand: Direct

Name: 222525859

Synonym: Chy400_2612

Alternate gene names: NA

Gene position: 3248958-3249620 (Clockwise)

Preceding gene: 222525857

Following gene: 222525860

Centisome position: 61.66

GC content: 56.71

Gene sequence:

>663_bases
ATGCGCCTGGGAATAGCGTTGATGTCAACATTACTGGCCGGACTGCTGGCAACCCTGATCTGGTTCGTCGTTGCCCGACC
AGTTAAAGTACTGCCACGCGGTGAACCGTTTCCGCCATTTGCCCTTACCGATCAACGGGGCACGCGCCTGCTCGACAGTG
ATCTGCGAGGGCGGATGGTCTTTGTCAGTCTCATGCACCGTCGTTGTGGTGACGAATGTGCCGAGCAGACAAGGCGTTTA
CTTGAATTGCGACAGGTGCTGCAGAGCAGTGGGCGATTGGGGAGCGAGGTTCTCTTTCTTACGATCACGCTTGATCCTGC
TCACGATACACCGGCCGACCTTGCGGCACTGGCGGGCGAGCTGGGGGTGGATCCGCAAACCTGGAGGTTTGTGACCGGCG
ATCCACAAGAAATAAAAATGATCGTCGGTGGTGGACTTGGGGTGTATTACACCGAACCTGATGAACATGGCAAATTGTAC
GCTGAGCGACGAACGTTTCTCATTGATCCCAGCGGGATGATCCGCACCTCGTACCCGGCTGAAGGGCCACCTCTGGCTAC
CGCCTTGCGCGATATCGATCTCATCGCCCGTGAGATGGGTAGCCAGGGCGCCATGCGGCTCGTGTACGAAGCGTCTCATC
TATTTGTGTGTTATCCGGAGTAA

Upstream 100 bases:

>100_bases
GTTGTAAGACTACAACTGCTTGTTATAGCCGCTTTACTCTGCTGTAGGCAATAGACCTGTATACTCGGCTTGCGAGAGCG
TATAGCTAGACGGATTCAGC

Downstream 100 bases:

>100_bases
AAACGAGGAGGACAGAATGGCAGAGTATCGCCGCCCGTCGGACGACGAGCACGACGATGATCATGAACCGCCACGTGGTG
CTCTCATGATCACGCTCGGC

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: Oxidoreductase Protein; Sco1/Senc Family Protein; SCO1/SenC Family Protein; Electron Transport /Senc; Lipoprotein

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRLGIALMSTLLAGLLATLIWFVVARPVKVLPRGEPFPPFALTDQRGTRLLDSDLRGRMVFVSLMHRRCGDECAEQTRRL
LELRQVLQSSGRLGSEVLFLTITLDPAHDTPADLAALAGELGVDPQTWRFVTGDPQEIKMIVGGGLGVYYTEPDEHGKLY
AERRTFLIDPSGMIRTSYPAEGPPLATALRDIDLIAREMGSQGAMRLVYEASHLFVCYPE

Sequences:

>Translated_220_residues
MRLGIALMSTLLAGLLATLIWFVVARPVKVLPRGEPFPPFALTDQRGTRLLDSDLRGRMVFVSLMHRRCGDECAEQTRRL
LELRQVLQSSGRLGSEVLFLTITLDPAHDTPADLAALAGELGVDPQTWRFVTGDPQEIKMIVGGGLGVYYTEPDEHGKLY
AERRTFLIDPSGMIRTSYPAEGPPLATALRDIDLIAREMGSQGAMRLVYEASHLFVCYPE
>Mature_220_residues
MRLGIALMSTLLAGLLATLIWFVVARPVKVLPRGEPFPPFALTDQRGTRLLDSDLRGRMVFVSLMHRRCGDECAEQTRRL
LELRQVLQSSGRLGSEVLFLTITLDPAHDTPADLAALAGELGVDPQTWRFVTGDPQEIKMIVGGGLGVYYTEPDEHGKLY
AERRTFLIDPSGMIRTSYPAEGPPLATALRDIDLIAREMGSQGAMRLVYEASHLFVCYPE

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24355; Mature: 24355

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGIALMSTLLAGLLATLIWFVVARPVKVLPRGEPFPPFALTDQRGTRLLDSDLRGRMV
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEECCCCCCCHHHHHHCCHHH
FVSLMHRRCGDECAEQTRRLLELRQVLQSSGRLGSEVLFLTITLDPAHDTPADLAALAGE
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHH
LGVDPQTWRFVTGDPQEIKMIVGGGLGVYYTEPDEHGKLYAERRTFLIDPSGMIRTSYPA
HCCCCCCEEEECCCHHHEEEEEECCEEEEECCCCCCCCEEECCEEEEECCCCCEEECCCC
EGPPLATALRDIDLIAREMGSQGAMRLVYEASHLFVCYPE
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECC
>Mature Secondary Structure
MRLGIALMSTLLAGLLATLIWFVVARPVKVLPRGEPFPPFALTDQRGTRLLDSDLRGRMV
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEECCCCCCCHHHHHHCCHHH
FVSLMHRRCGDECAEQTRRLLELRQVLQSSGRLGSEVLFLTITLDPAHDTPADLAALAGE
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHH
LGVDPQTWRFVTGDPQEIKMIVGGGLGVYYTEPDEHGKLYAERRTFLIDPSGMIRTSYPA
HCCCCCCEEEECCCHHHEEEEEECCEEEEECCCCCCCCEEECCEEEEECCCCCEEECCCC
EGPPLATALRDIDLIAREMGSQGAMRLVYEASHLFVCYPE
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA