| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525853
Identifier: 222525853
GI number: 222525853
Start: 3242185
End: 3243333
Strand: Direct
Name: 222525853
Synonym: Chy400_2606
Alternate gene names: NA
Gene position: 3242185-3243333 (Clockwise)
Preceding gene: 222525852
Following gene: 222525854
Centisome position: 61.53
GC content: 55.09
Gene sequence:
>1149_bases ATGCCGGTTCGGATGATCGACAGCGCCGGCTTACTGGCTGAATTGAATGAACAAATTGGCCCGCGTAGAGCAACGTCGGC GGCAGAAGCAATAGCAGCAGCCCAAATGAATGCCCGCCTGCGACAGGCGGGCTTTAGCGTTGATACGCGATCTTTACCGG CAACTGATCGTCCGGGAAGTCGGTTTGTGCCAGTAGCACTCCTTCTGGCGATAATCACAGTGTTCACCGGCTGGCAACCT CTCGTTGGATTGATCTTTGGGCCATGGTTGATGGTATTGTTGCTGGTCGATACGCTGTATGCGCAACTTCCTGTCTGGCA CCGACGGCACACCAGTCAGAACATTGTAGCGGCGCGTCCAGTCACAGAGTCGCTCACCCAGACCCCTCGCCAGCCACAGC ACAGATTGATCATCCTGGCTCCGCTTGATACGCCTCCAGCATGGCGTGGTATGACGGTCTTTATTGCACCGACGTATGAA GGTTTACTTGCCCGTTTGAGTGTGAGTTGTTTGCCAATTCTGGTAGCTGTTAGTACAACCATATGGCCGGAGTGGCGTTG GGTATTAATCATTGGGGGGTTAGGGGGAGTATTTGGCTTTTGGTGGGCATGCCAGCGTCAGCCACCATTGTCCCAGCCTG ATGGTGGACTGGCGGCACTGGCAGCACTGGTACTGGCCGGTCAACAACTACCCGCGTTGCAGCACGTTGAGGTGTGGGCC GTCGCTGTAGGTGCGGCATACTATGATCGCAATGGGATAAAGATGTTGCTCGAACGCTATCCGTTTGATCCGGCGGACAC GTCGGTCATTGGATTGGGGCCACTTGCCGGCGGTCAGCTTGCGGTGATTAGTCGGAGCGGAATCTTTCGTCAGGTCAGCG CCGATCCGCACCTTTTCCAGTTAGCAATGATCGCTGATCGTAACGACCCAGGCATTGATCTCGAACCGCGGCCGCTGGCA AGTGATGATGATCTGCTGTCACCATTTTGGAAGCGTGGATTTCGCACCCTGAGCATTCAAGCCATACCTCAGCGCGCTTC AGTCCTCGATCCATCATTAGCCGACCGGGCTGCCCGTCTCGTGGTAGCAATTGCTCAGGCCCTTGATACAGAGAATAACC ATGATTTATCTGTTTTACGGACCCAATGA
Upstream 100 bases:
>100_bases CCGGCGACATCAACGCCGATCAGAGCACCGGTGGTAACCGATCCAACAAATACGCCAGCGCCAACACCGACACCAACACC ATAGAAGTAGCAGAAGAGCA
Downstream 100 bases:
>100_bases ACTGGCGCGCAGCGAGGCGGTGGCTGAGTTGCGGGCCGGTTTGCCCGCAGAGGTCGCTGACCTCAACGTCAGTGTGCTTG ATGGGCGGAAGCTCACTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MPVRMIDSAGLLAELNEQIGPRRATSAAEAIAAAQMNARLRQAGFSVDTRSLPATDRPGSRFVPVALLLAIITVFTGWQP LVGLIFGPWLMVLLLVDTLYAQLPVWHRRHTSQNIVAARPVTESLTQTPRQPQHRLIILAPLDTPPAWRGMTVFIAPTYE GLLARLSVSCLPILVAVSTTIWPEWRWVLIIGGLGGVFGFWWACQRQPPLSQPDGGLAALAALVLAGQQLPALQHVEVWA VAVGAAYYDRNGIKMLLERYPFDPADTSVIGLGPLAGGQLAVISRSGIFRQVSADPHLFQLAMIADRNDPGIDLEPRPLA SDDDLLSPFWKRGFRTLSIQAIPQRASVLDPSLADRAARLVVAIAQALDTENNHDLSVLRTQ
Sequences:
>Translated_382_residues MPVRMIDSAGLLAELNEQIGPRRATSAAEAIAAAQMNARLRQAGFSVDTRSLPATDRPGSRFVPVALLLAIITVFTGWQP LVGLIFGPWLMVLLLVDTLYAQLPVWHRRHTSQNIVAARPVTESLTQTPRQPQHRLIILAPLDTPPAWRGMTVFIAPTYE GLLARLSVSCLPILVAVSTTIWPEWRWVLIIGGLGGVFGFWWACQRQPPLSQPDGGLAALAALVLAGQQLPALQHVEVWA VAVGAAYYDRNGIKMLLERYPFDPADTSVIGLGPLAGGQLAVISRSGIFRQVSADPHLFQLAMIADRNDPGIDLEPRPLA SDDDLLSPFWKRGFRTLSIQAIPQRASVLDPSLADRAARLVVAIAQALDTENNHDLSVLRTQ >Mature_381_residues PVRMIDSAGLLAELNEQIGPRRATSAAEAIAAAQMNARLRQAGFSVDTRSLPATDRPGSRFVPVALLLAIITVFTGWQPL VGLIFGPWLMVLLLVDTLYAQLPVWHRRHTSQNIVAARPVTESLTQTPRQPQHRLIILAPLDTPPAWRGMTVFIAPTYEG LLARLSVSCLPILVAVSTTIWPEWRWVLIIGGLGGVFGFWWACQRQPPLSQPDGGLAALAALVLAGQQLPALQHVEVWAV AVGAAYYDRNGIKMLLERYPFDPADTSVIGLGPLAGGQLAVISRSGIFRQVSADPHLFQLAMIADRNDPGIDLEPRPLAS DDDLLSPFWKRGFRTLSIQAIPQRASVLDPSLADRAARLVVAIAQALDTENNHDLSVLRTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41610; Mature: 41479
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRMIDSAGLLAELNEQIGPRRATSAAEAIAAAQMNARLRQAGFSVDTRSLPATDRPGS CCCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC RFVPVALLLAIITVFTGWQPLVGLIFGPWLMVLLLVDTLYAQLPVWHRRHTSQNIVAARP CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECC VTESLTQTPRQPQHRLIILAPLDTPPAWRGMTVFIAPTYEGLLARLSVSCLPILVAVSTT CHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH IWPEWRWVLIIGGLGGVFGFWWACQRQPPLSQPDGGLAALAALVLAGQQLPALQHVEVWA CCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH VAVGAAYYDRNGIKMLLERYPFDPADTSVIGLGPLAGGQLAVISRSGIFRQVSADPHLFQ HHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEECCCCEEECCCCCCEEE LAMIADRNDPGIDLEPRPLASDDDLLSPFWKRGFRTLSIQAIPQRASVLDPSLADRAARL EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHCCCHHHHHHHHH VVAIAQALDTENNHDLSVLRTQ HHHHHHHHCCCCCCCEEEEECC >Mature Secondary Structure PVRMIDSAGLLAELNEQIGPRRATSAAEAIAAAQMNARLRQAGFSVDTRSLPATDRPGS CCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC RFVPVALLLAIITVFTGWQPLVGLIFGPWLMVLLLVDTLYAQLPVWHRRHTSQNIVAARP CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECC VTESLTQTPRQPQHRLIILAPLDTPPAWRGMTVFIAPTYEGLLARLSVSCLPILVAVSTT CHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH IWPEWRWVLIIGGLGGVFGFWWACQRQPPLSQPDGGLAALAALVLAGQQLPALQHVEVWA CCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH VAVGAAYYDRNGIKMLLERYPFDPADTSVIGLGPLAGGQLAVISRSGIFRQVSADPHLFQ HHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEECCCCEEECCCCCCEEE LAMIADRNDPGIDLEPRPLASDDDLLSPFWKRGFRTLSIQAIPQRASVLDPSLADRAARL EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHCCCHHHHHHHHH VVAIAQALDTENNHDLSVLRTQ HHHHHHHHCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA