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The map label for this gene is ygaF [H]

Identifier: 222525415

GI number: 222525415

Start: 2738334

End: 2738801

Strand: Direct

Name: ygaF [H]

Synonym: Chy400_2160

Alternate gene names: 222525415

Gene position: 2738334-2738801 (Clockwise)

Preceding gene: 222525413

Following gene: 222525418

Centisome position: 51.97

GC content: 53.42

Gene sequence:

>468_bases
ATGGCAACACCACCACAAGTTGGCGAGATGGCTCCCGACTTTACCCTTCCGAACGAAGCCGGCGAACCGGTCTCACTCAG
CCAGTTTCGCGGCAAGCGGGTTATTCTCTACTTCTACCCCAAAGACGATACTCCCGGTTGTACATCACAAGCCTGCGGTT
TCCGCGACTCATACCCGGTCATTGAAGAAAAGAACGCCGTCGTGATCGGGATCAGTCCTGATGGCACCAAATCCCACGCC
AAATTCAAAACGAAACACAACTTGCCTTTCATCCTGTTAGCCGATGAGCAGCACAGTGTTGCCGAGGCGTATGGGGTGTG
GGGCGAGAAGTCGATGATGGGCAAGAAATATATGGGCATCATTCGCTCCCACTTCGTCATCGATGAAGAGGGTCGCATTG
TGCAGGCTGAAATTAAAGTGAGTCCCGCCGATAGTGTCAAACGCGCTCTTGCAGCGCTGGGCTTATAG

Upstream 100 bases:

>100_bases
GCTACGACATTGAGCAGGAGGGTATTGTGACGTGTCTTCGTGGTGCAACTTGTGGTAGCATGGTAGTGCAGGATCCGCGA
TAGATCAGGAAACAAAAGGT

Downstream 100 bases:

>100_bases
TCGCCGCGTGCCATGGCGAGAGCGATTTACGCAGCTGTATAATCCATTCTCTTATCAGGGAGCGTCACATTGAGTGCGGA
AGCGTTGTTTCCGTACTCAA

Product: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MATPPQVGEMAPDFTLPNEAGEPVSLSQFRGKRVILYFYPKDDTPGCTSQACGFRDSYPVIEEKNAVVIGISPDGTKSHA
KFKTKHNLPFILLADEQHSVAEAYGVWGEKSMMGKKYMGIIRSHFVIDEEGRIVQAEIKVSPADSVKRALAALGL

Sequences:

>Translated_155_residues
MATPPQVGEMAPDFTLPNEAGEPVSLSQFRGKRVILYFYPKDDTPGCTSQACGFRDSYPVIEEKNAVVIGISPDGTKSHA
KFKTKHNLPFILLADEQHSVAEAYGVWGEKSMMGKKYMGIIRSHFVIDEEGRIVQAEIKVSPADSVKRALAALGL
>Mature_154_residues
ATPPQVGEMAPDFTLPNEAGEPVSLSQFRGKRVILYFYPKDDTPGCTSQACGFRDSYPVIEEKNAVVIGISPDGTKSHAK
FKTKHNLPFILLADEQHSVAEAYGVWGEKSMMGKKYMGIIRSHFVIDEEGRIVQAEIKVSPADSVKRALAALGL

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788825, Length=131, Percent_Identity=50.381679389313, Blast_Score=144, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6322180, Length=146, Percent_Identity=40.4109589041096, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 16970; Mature: 16838

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPPQVGEMAPDFTLPNEAGEPVSLSQFRGKRVILYFYPKDDTPGCTSQACGFRDSYPV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
IEEKNAVVIGISPDGTKSHAKFKTKHNLPFILLADEQHSVAEAYGVWGEKSMMGKKYMGI
EECCCEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHCCCCCHHHHHHHHHHH
IRSHFVIDEEGRIVQAEIKVSPADSVKRALAALGL
HHHHEEECCCCCEEEEEEEECCHHHHHHHHHHHCC
>Mature Secondary Structure 
ATPPQVGEMAPDFTLPNEAGEPVSLSQFRGKRVILYFYPKDDTPGCTSQACGFRDSYPV
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
IEEKNAVVIGISPDGTKSHAKFKTKHNLPFILLADEQHSVAEAYGVWGEKSMMGKKYMGI
EECCCEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHCCCCCHHHHHHHHHHH
IRSHFVIDEEGRIVQAEIKVSPADSVKRALAALGL
HHHHEEECCCCCEEEEEEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]