| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524824
Identifier: 222524824
GI number: 222524824
Start: 1973178
End: 1974347
Strand: Direct
Name: 222524824
Synonym: Chy400_1551
Alternate gene names: NA
Gene position: 1973178-1974347 (Clockwise)
Preceding gene: 222524822
Following gene: 222524825
Centisome position: 37.45
GC content: 54.27
Gene sequence:
>1170_bases ATGAAAGCTGTCGTTCAGCAATGGTATACTCACCCCGCTGTGCGGGCTGCTTTGACTGATCTTGCCGACTATCGGCCAAC ACTGGCTACGGCAATTGAAATTCAACAGGTTCCGGCGCCAACGTTTGCTGAACGACCACGCTCATTGCTTGTCAGCCAGC GTATGCAAGCCCTCGGTCTGCACGATGTCGAGGTTGATGATCTGGGAAATGTGTATGGCCGCCGCCCGGGTAGTACCGCA CGTCCAGGACTGTTGATCTCGGCTCACCTTGATACCGTTTTTCCAGCCGATACCGATCTCTCGATTCGTTATGAAGGTGA ACGAGTGTATGGCCCCGGTATCGGTGACAATAGCGCAGGTGTTGCCGGCTTGCTGCGCCTGGCTGAGATGTATCAGCGCT TTGATCTGCCCAATACCAGCGACATCTGGTTTGTAGCCAATGTTGGTGAAGAGGGTCTGGGCGATCTCCGCGGTATGCGC AGGGTGGTTGAGCGCTTGCGAACCCGTCTGAGTACGGTGGTCGTCATTGAAGGTTGCGATTTCGGGTCGCTTCACCATCA GGCGATTGGTGTCCGTCGGTTTCGGATTGAAGCCACCGGCCCTGGTGGTCACTCGTGGGGAAATTTTGGTACACCGAGCG CCATTCACGTTCTGGTTCGGCTGGCTGCTAGGTTAACCGAATTGCAGGTACCATCGTCTCCCCGTACTACGTTTAATATC GGTACCATCAGTGGTGGCACGTCGGTGAATACAATTGCCCAGCACGCCAACATGCTCCTCGATCTACGCTCGGTATCGTC GGCAGCGCTCACCGATCTGGTCAATGAAGTGTATCGTCTGGTCGAAGAAGTTGCGCTTGAGTACCCGGATGTGCACATTC AGCTTACTAAAGTGGGAGATCGGCCTTCAGGTGCTATCCCTCGTGAACATCCGCTGGTTCAGGCCGCAGTCGCAGCCTAT CAAATGGTCGGTGCGCAGATTTCATTTCAGCAGAGCAGCACCGATGCCAATATTCCATTGAGTCTGGGGATGCCTGCGGT TTGTGTTGGTTTGACTGATGGTGGCAATGCCCATCGTACCGATGAGTATATTTTGCCGTTTAACCTGAGTCGGGGAATGC AGGCGCTACTTCTGCTTTCGCTGGCAGCAAATACCCTTGAAACGATATGA
Upstream 100 bases:
>100_bases TACGTCGTAAACAAGTTGTGTTTGCTACAAAAACATCCCGTGCCAGCCAAAAGATGATCTATTTCCGGAGTGAATTATCG AACAACAGAAGGATCAGGCG
Downstream 100 bases:
>100_bases TGAGGATGCGGATTCAATACATATGCGTAAACTGCTCGTTGTTCTCCTGATGGTGTTGATCCTCTCACCCGTGCCGGTTA CTGCGAATACTGCTGCCGGC
Product: peptidase M20
Products: NA
Alternate protein names: Peptidase; Acetylornithine Deacetylase; Peptidase T-Like Protein; Peptidase Dimerisation Domain-Containing Protein; Glutamate Carboxypeptidase; Peptidase Dimerization Domain Protein; Peptidase T; Deacylase; Succinyl-Diaminopimelate Desuccinylase; Peptidase Family; M20 Family Peptidase; Amidohydrolase/Metallopeptidase; Di- And Tripeptidases; Aminoacyl-Histidine Dipeptidase; Hippurate Hydrolase Protein; M20/M25/M40 Family Peptidase; Peptidase Dimerisation Domain Protein
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKAVVQQWYTHPAVRAALTDLADYRPTLATAIEIQQVPAPTFAERPRSLLVSQRMQALGLHDVEVDDLGNVYGRRPGSTA RPGLLISAHLDTVFPADTDLSIRYEGERVYGPGIGDNSAGVAGLLRLAEMYQRFDLPNTSDIWFVANVGEEGLGDLRGMR RVVERLRTRLSTVVVIEGCDFGSLHHQAIGVRRFRIEATGPGGHSWGNFGTPSAIHVLVRLAARLTELQVPSSPRTTFNI GTISGGTSVNTIAQHANMLLDLRSVSSAALTDLVNEVYRLVEEVALEYPDVHIQLTKVGDRPSGAIPREHPLVQAAVAAY QMVGAQISFQQSSTDANIPLSLGMPAVCVGLTDGGNAHRTDEYILPFNLSRGMQALLLLSLAANTLETI
Sequences:
>Translated_389_residues MKAVVQQWYTHPAVRAALTDLADYRPTLATAIEIQQVPAPTFAERPRSLLVSQRMQALGLHDVEVDDLGNVYGRRPGSTA RPGLLISAHLDTVFPADTDLSIRYEGERVYGPGIGDNSAGVAGLLRLAEMYQRFDLPNTSDIWFVANVGEEGLGDLRGMR RVVERLRTRLSTVVVIEGCDFGSLHHQAIGVRRFRIEATGPGGHSWGNFGTPSAIHVLVRLAARLTELQVPSSPRTTFNI GTISGGTSVNTIAQHANMLLDLRSVSSAALTDLVNEVYRLVEEVALEYPDVHIQLTKVGDRPSGAIPREHPLVQAAVAAY QMVGAQISFQQSSTDANIPLSLGMPAVCVGLTDGGNAHRTDEYILPFNLSRGMQALLLLSLAANTLETI >Mature_389_residues MKAVVQQWYTHPAVRAALTDLADYRPTLATAIEIQQVPAPTFAERPRSLLVSQRMQALGLHDVEVDDLGNVYGRRPGSTA RPGLLISAHLDTVFPADTDLSIRYEGERVYGPGIGDNSAGVAGLLRLAEMYQRFDLPNTSDIWFVANVGEEGLGDLRGMR RVVERLRTRLSTVVVIEGCDFGSLHHQAIGVRRFRIEATGPGGHSWGNFGTPSAIHVLVRLAARLTELQVPSSPRTTFNI GTISGGTSVNTIAQHANMLLDLRSVSSAALTDLVNEVYRLVEEVALEYPDVHIQLTKVGDRPSGAIPREHPLVQAAVAAY QMVGAQISFQQSSTDANIPLSLGMPAVCVGLTDGGNAHRTDEYILPFNLSRGMQALLLLSLAANTLETI
Specific function: Unknown
COG id: COG2195
COG function: function code E; Di- and tripeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42072; Mature: 42072
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVVQQWYTHPAVRAALTDLADYRPTLATAIEIQQVPAPTFAERPRSLLVSQRMQALGL CCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHEEHHCCCCCCHHHHHHHHHHHHHHHHCCC HDVEVDDLGNVYGRRPGSTARPGLLISAHLDTVFPADTDLSIRYEGERVYGPGIGDNSAG CCCCHHHHHHHHCCCCCCCCCCCEEEEECCCEECCCCCCEEEEECCCEEECCCCCCCCHH VAGLLRLAEMYQRFDLPNTSDIWFVANVGEEGLGDLRGMRRVVERLRTRLSTVVVIEGCD HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCC FGSLHHQAIGVRRFRIEATGPGGHSWGNFGTPSAIHVLVRLAARLTELQVPSSPRTTFNI CCCHHHHHHCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE GTISGGTSVNTIAQHANMLLDLRSVSSAALTDLVNEVYRLVEEVALEYPDVHIQLTKVGD EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC RPSGAIPREHPLVQAAVAAYQMVGAQISFQQSSTDANIPLSLGMPAVCVGLTDGGNAHRT CCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCEECCCCEEEEEECCCCCCCCC DEYILPFNLSRGMQALLLLSLAANTLETI CCEEEECCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKAVVQQWYTHPAVRAALTDLADYRPTLATAIEIQQVPAPTFAERPRSLLVSQRMQALGL CCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHEEHHCCCCCCHHHHHHHHHHHHHHHHCCC HDVEVDDLGNVYGRRPGSTARPGLLISAHLDTVFPADTDLSIRYEGERVYGPGIGDNSAG CCCCHHHHHHHHCCCCCCCCCCCEEEEECCCEECCCCCCEEEEECCCEEECCCCCCCCHH VAGLLRLAEMYQRFDLPNTSDIWFVANVGEEGLGDLRGMRRVVERLRTRLSTVVVIEGCD HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCC FGSLHHQAIGVRRFRIEATGPGGHSWGNFGTPSAIHVLVRLAARLTELQVPSSPRTTFNI CCCHHHHHHCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE GTISGGTSVNTIAQHANMLLDLRSVSSAALTDLVNEVYRLVEEVALEYPDVHIQLTKVGD EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC RPSGAIPREHPLVQAAVAAYQMVGAQISFQQSSTDANIPLSLGMPAVCVGLTDGGNAHRT CCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCEECCCCEEEEEECCCCCCCCC DEYILPFNLSRGMQALLLLSLAANTLETI CCEEEECCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA