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The map label for this gene is ycdM [C]

Identifier: 222524789

GI number: 222524789

Start: 1927025

End: 1927777

Strand: Direct

Name: ycdM [C]

Synonym: Chy400_1516

Alternate gene names: 222524789

Gene position: 1927025-1927777 (Clockwise)

Preceding gene: 222524785

Following gene: 222524790

Centisome position: 36.57

GC content: 55.38

Gene sequence:

>753_bases
ATGTCTCGTTTTCGCGTTGGCGTTCAACTTCATCCACAACACACCACGTGGGAATCGTACCGTCAAGCTGTTCAATATGC
CGAATCAATTGGCTGTGACACGATCTGGAACTGGGATCACTTTTTTCCTCTCTACGGGCCGCCAGATGGTCCCCATTTCG
AGGGCTGGACGCTCCTGACGGCAATGGCTGTCATCACCCAACGGGCCGAGGTTGGATGTCTGGTCACCTGCAACAGCTAT
CGTAATCCAGCCTTACTCTCGAATATGGCAAAGACCGTCGATCATATCAGTGGTGGACGACTCATTCTTGGGCTGGGCGC
AGGTTGGTTTGAAAAAGATTATACGACGTTTGGCTACGAATTTGGGACGGCTGCCGACCGTCTGCGCGCACTTCGGCAGG
CGTTGCCGATTATCAAAGAGCGATGGGCCGCCGATCAACCGCCACCGCTGCGCCGCATTCCAATCTTGATCGGTGGTGGC
GGTGAAAAGGTCACCCTGCGCATTACTGCTGAACACGCCGACATCTGGCACGGCTTTGGTCCGATTGAAAACTTCAAGCG
CAAGAATGCCATCCTCGATCAGTGGTGCGAACAGATCGGACGTGATCCGGCAACCATCGAGCGTAGTGTGTCACCGCGAG
CTGGTGAGCCGATTGAACCGTACCTTGAAGCCGGTGCCACCCACATCATCATTGGGATGGGTGAACCGTGGAACTTCGCA
CCGGTTGAGGAGCTGCTGAAACTGCGCGGTTAG

Upstream 100 bases:

>100_bases
CATGCAGCACTGCAACACACAGTTTACAGCATAAACGCAATTTGTGCAGGCTTTTTAAGTGTCATTTTGTTTATCGCCGC
TTCACCAGAAAGGGCAAAAG

Downstream 100 bases:

>100_bases
AAGTTGACATAAATTACATAACCTGTATCACGTCGGGCGAGGTAGACGAAGGAAAGATTTTCGTCTGCCTCACCCGACAG
GTTTTTGCAGTCCAACCAAC

Product: coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein

Products: NA

Alternate protein names: Luciferase Family Protein; Monooxygenase; Oxidoreductase; Luciferase-Like Protein; MmcI Protein; Luciferase-Like Subgroup; Fmn-Dependent Monooxygenase; Luciferase-Like Monooxygenase Superfamily; Luciferase; Alkanesulfonate Monooxygenase; 5 10-Methylenetetrahydromethanopterin Reductase; Dehydrogenase; Flavin-Dependent Oxidoreductase; Luciferase-Like Oxidoreductase; Sugar Transporter Superfamily Protein

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSRFRVGVQLHPQHTTWESYRQAVQYAESIGCDTIWNWDHFFPLYGPPDGPHFEGWTLLTAMAVITQRAEVGCLVTCNSY
RNPALLSNMAKTVDHISGGRLILGLGAGWFEKDYTTFGYEFGTAADRLRALRQALPIIKERWAADQPPPLRRIPILIGGG
GEKVTLRITAEHADIWHGFGPIENFKRKNAILDQWCEQIGRDPATIERSVSPRAGEPIEPYLEAGATHIIIGMGEPWNFA
PVEELLKLRG

Sequences:

>Translated_250_residues
MSRFRVGVQLHPQHTTWESYRQAVQYAESIGCDTIWNWDHFFPLYGPPDGPHFEGWTLLTAMAVITQRAEVGCLVTCNSY
RNPALLSNMAKTVDHISGGRLILGLGAGWFEKDYTTFGYEFGTAADRLRALRQALPIIKERWAADQPPPLRRIPILIGGG
GEKVTLRITAEHADIWHGFGPIENFKRKNAILDQWCEQIGRDPATIERSVSPRAGEPIEPYLEAGATHIIIGMGEPWNFA
PVEELLKLRG
>Mature_249_residues
SRFRVGVQLHPQHTTWESYRQAVQYAESIGCDTIWNWDHFFPLYGPPDGPHFEGWTLLTAMAVITQRAEVGCLVTCNSYR
NPALLSNMAKTVDHISGGRLILGLGAGWFEKDYTTFGYEFGTAADRLRALRQALPIIKERWAADQPPPLRRIPILIGGGG
EKVTLRITAEHADIWHGFGPIENFKRKNAILDQWCEQIGRDPATIERSVSPRAGEPIEPYLEAGATHIIIGMGEPWNFAP
VEELLKLRG

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28060; Mature: 27929

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFRVGVQLHPQHTTWESYRQAVQYAESIGCDTIWNWDHFFPLYGPPDGPHFEGWTLLT
CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCCCHHHHHH
AMAVITQRAEVGCLVTCNSYRNPALLSNMAKTVDHISGGRLILGLGAGWFEKDYTTFGYE
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCEE
FGTAADRLRALRQALPIIKERWAADQPPPLRRIPILIGGGGEKVTLRITAEHADIWHGFG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEECCCHHHCCCC
PIENFKRKNAILDQWCEQIGRDPATIERSVSPRAGEPIEPYLEAGATHIIIGMGEPWNFA
CHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCH
PVEELLKLRG
HHHHHHHHCC
>Mature Secondary Structure 
SRFRVGVQLHPQHTTWESYRQAVQYAESIGCDTIWNWDHFFPLYGPPDGPHFEGWTLLT
CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCCCHHHHHH
AMAVITQRAEVGCLVTCNSYRNPALLSNMAKTVDHISGGRLILGLGAGWFEKDYTTFGYE
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCEE
FGTAADRLRALRQALPIIKERWAADQPPPLRRIPILIGGGGEKVTLRITAEHADIWHGFG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEECCCHHHCCCC
PIENFKRKNAILDQWCEQIGRDPATIERSVSPRAGEPIEPYLEAGATHIIIGMGEPWNFA
CHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCH
PVEELLKLRG
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA