| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524769
Identifier: 222524769
GI number: 222524769
Start: 1891937
End: 1893406
Strand: Direct
Name: 222524769
Synonym: Chy400_1496
Alternate gene names: NA
Gene position: 1891937-1893406 (Clockwise)
Preceding gene: 222524767
Following gene: 222524772
Centisome position: 35.91
GC content: 51.63
Gene sequence:
>1470_bases ATGCGTCGTGTGTTCAATGCCCTTTTAGCAGTGATTGCGCTGCTCCTGGCAACTCATTCTGCACTTCCGGTGAGCGCACA GGGCAGTGCCTACAACACCAACTTTATCACATCCATTACGTACCAGAACGTCGGCACCGCTACCGCAAACATTACGTTTA CCTTTTACCCGACATCGGGCGGTACGCCAATTTCATTCAGCCGCACTCTTGCTGCTAATGCCGGTGCATCGCTCAATGTT GGCTCAACAAGCGAGCTGAGCGGCTTTTCCGGGCAGGGTTCGGCGGTCATTTCCTCGGATCAGCCAATTGTGGCGACGGT TGTGCAATTGCCACAGAATGCAAATGTACGCAATCGCCCCCTGTCCAATGGCTTTGGTAGCAACGATGGTAGCAACAACG TTCTGATTGCAACGGTATTGAAGAATACGTTTAATCAGACCACCAAATTCTCAATCCAAAATGCTGACACAACAAATGTT AACGTAACGTTGCGATTTTTTGCCGTTGGTTCAGCCACGCCTACCCACACCGAGACCTTTTCATTGAATGTTGGTACCGC TCGCTTCTTTGATGCCGGTACCATTAGCCAGCTCGGCACAAGCTTCAACGGATCGGCAACCATTCAAGCTACCGGTAAAG TTGTGGCTACGGCAATTGAAGCAACAACCGATACTTCTTACAAAGTGAGCGCGTTTGAGGGTGTTGCCCAGGGGAGTAAT ACGGTCTACATGCCAAGCGCCCTCTGCAATTTTGGTAGCACTCAGCAGCGCTCTGCCTATGCTGTGCAGAACACCAGCAC CACAAATTCGGCAACTGTCACTGTGACGTATAAAGATACAAACAACAATACAGTTGCAACTCAGACCGCAAATATTCCGG CTAACGCGAAATTCAGCTTCCAGACATGCAGTGCCTCTGGTATCCCGAGTAATTTTAGTGGCTCAGCAACCATTACCAGT TCGGGCGCACCGATTGTCGCCATTGGTAAGGTCTTCTCAGGCAGCCCGGCATACGCCGCACTGGCCACCGCATTCGTTGG TGCGTCTGCCGGTGCCAGCAAGCTGGCAGCACCTTATGTGCGCTGGACGCAAACCCGCTTCGATATTAACCCCGGTAACC GACAACGCGCATTTATTGCCATTCAGAATGTCGGTTCGGGTGCTTCAGGCACCATTACGGTCAAATACTACGATTTGAAT GGTAATCTGATTGGTACCCATACGATCAGCTCTATCAACTCTGGTCAGAAGACGAACTCGACCCCCATCGCTGCCACACC TGCGGCAGGCAAGACGACAGCCGACCTTGCGGAGTTTGGCTACATCGGTGGCTTTGGTGGCAGTGCGACGATTGAATGTG CCGGAACCGGTTGTCAGATTGTCGCCGTTGTTCGTATCGCATCGGCGAACTCGGCAACGAACACGGCAGATATTGTCGCC GAAGACTATAACGCTATTCCGATCAATTAA
Upstream 100 bases:
>100_bases AGCGAGTAGCGCAAATAACCTGTTGGTGGTATCGCTAATCCTGCGCAGCAACAGTATGATACGACCGAACGAGCATATCG GTTCAGGAGAGGAGATAGCT
Downstream 100 bases:
>100_bases TTTGATAGGCTAAAGGGACGGTGAGAGCGCGGCACGCACCTGTGTGCCGCGCTCTTTGTATGTACCTTACTGTTGCTACA GGGTACTTTGGGGTATATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MRRVFNALLAVIALLLATHSALPVSAQGSAYNTNFITSITYQNVGTATANITFTFYPTSGGTPISFSRTLAANAGASLNV GSTSELSGFSGQGSAVISSDQPIVATVVQLPQNANVRNRPLSNGFGSNDGSNNVLIATVLKNTFNQTTKFSIQNADTTNV NVTLRFFAVGSATPTHTETFSLNVGTARFFDAGTISQLGTSFNGSATIQATGKVVATAIEATTDTSYKVSAFEGVAQGSN TVYMPSALCNFGSTQQRSAYAVQNTSTTNSATVTVTYKDTNNNTVATQTANIPANAKFSFQTCSASGIPSNFSGSATITS SGAPIVAIGKVFSGSPAYAALATAFVGASAGASKLAAPYVRWTQTRFDINPGNRQRAFIAIQNVGSGASGTITVKYYDLN GNLIGTHTISSINSGQKTNSTPIAATPAAGKTTADLAEFGYIGGFGGSATIECAGTGCQIVAVVRIASANSATNTADIVA EDYNAIPIN
Sequences:
>Translated_489_residues MRRVFNALLAVIALLLATHSALPVSAQGSAYNTNFITSITYQNVGTATANITFTFYPTSGGTPISFSRTLAANAGASLNV GSTSELSGFSGQGSAVISSDQPIVATVVQLPQNANVRNRPLSNGFGSNDGSNNVLIATVLKNTFNQTTKFSIQNADTTNV NVTLRFFAVGSATPTHTETFSLNVGTARFFDAGTISQLGTSFNGSATIQATGKVVATAIEATTDTSYKVSAFEGVAQGSN TVYMPSALCNFGSTQQRSAYAVQNTSTTNSATVTVTYKDTNNNTVATQTANIPANAKFSFQTCSASGIPSNFSGSATITS SGAPIVAIGKVFSGSPAYAALATAFVGASAGASKLAAPYVRWTQTRFDINPGNRQRAFIAIQNVGSGASGTITVKYYDLN GNLIGTHTISSINSGQKTNSTPIAATPAAGKTTADLAEFGYIGGFGGSATIECAGTGCQIVAVVRIASANSATNTADIVA EDYNAIPIN >Mature_489_residues MRRVFNALLAVIALLLATHSALPVSAQGSAYNTNFITSITYQNVGTATANITFTFYPTSGGTPISFSRTLAANAGASLNV GSTSELSGFSGQGSAVISSDQPIVATVVQLPQNANVRNRPLSNGFGSNDGSNNVLIATVLKNTFNQTTKFSIQNADTTNV NVTLRFFAVGSATPTHTETFSLNVGTARFFDAGTISQLGTSFNGSATIQATGKVVATAIEATTDTSYKVSAFEGVAQGSN TVYMPSALCNFGSTQQRSAYAVQNTSTTNSATVTVTYKDTNNNTVATQTANIPANAKFSFQTCSASGIPSNFSGSATITS SGAPIVAIGKVFSGSPAYAALATAFVGASAGASKLAAPYVRWTQTRFDINPGNRQRAFIAIQNVGSGASGTITVKYYDLN GNLIGTHTISSINSGQKTNSTPIAATPAAGKTTADLAEFGYIGGFGGSATIECAGTGCQIVAVVRIASANSATNTADIVA EDYNAIPIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50007; Mature: 50007
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVFNALLAVIALLLATHSALPVSAQGSAYNTNFITSITYQNVGTATANITFTFYPTSG CHHHHHHHHHHHHHHHHCCCCCCEECCCCEECCEEEEEEEECCCCCEEEEEEEEEEECCC GTPISFSRTLAANAGASLNVGSTSELSGFSGQGSAVISSDQPIVATVVQLPQNANVRNRP CCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCC LSNGFGSNDGSNNVLIATVLKNTFNQTTKFSIQNADTTNVNVTLRFFAVGSATPTHTETF CCCCCCCCCCCCCEEEEEEEHHHCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEE SLNVGTARFFDAGTISQLGTSFNGSATIQATGKVVATAIEATTDTSYKVSAFEGVAQGSN EEECCCEEEECCCCHHHHCCCCCCCEEEEECCEEEEEEEEECCCCCEEEEEHHHHHCCCC TVYMPSALCNFGSTQQRSAYAVQNTSTTNSATVTVTYKDTNNNTVATQTANIPANAKFSF EEEECHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCEEEE QTCSASGIPSNFSGSATITSSGAPIVAIGKVFSGSPAYAALATAFVGASAGASKLAAPYV EECCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCHHHCCCCE RWTQTRFDINPGNRQRAFIAIQNVGSGASGTITVKYYDLNGNLIGTHTISSINSGQKTNS EEEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCC TPIAATPAAGKTTADLAEFGYIGGFGGSATIECAGTGCQIVAVVRIASANSATNTADIVA CCEEECCCCCCCHHHHHHHCCEECCCCCEEEEECCCCEEEEEEEEEECCCCCCCCEEEEE EDYNAIPIN CCCCEECCC >Mature Secondary Structure MRRVFNALLAVIALLLATHSALPVSAQGSAYNTNFITSITYQNVGTATANITFTFYPTSG CHHHHHHHHHHHHHHHHCCCCCCEECCCCEECCEEEEEEEECCCCCEEEEEEEEEEECCC GTPISFSRTLAANAGASLNVGSTSELSGFSGQGSAVISSDQPIVATVVQLPQNANVRNRP CCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCC LSNGFGSNDGSNNVLIATVLKNTFNQTTKFSIQNADTTNVNVTLRFFAVGSATPTHTETF CCCCCCCCCCCCCEEEEEEEHHHCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEE SLNVGTARFFDAGTISQLGTSFNGSATIQATGKVVATAIEATTDTSYKVSAFEGVAQGSN EEECCCEEEECCCCHHHHCCCCCCCEEEEECCEEEEEEEEECCCCCEEEEEHHHHHCCCC TVYMPSALCNFGSTQQRSAYAVQNTSTTNSATVTVTYKDTNNNTVATQTANIPANAKFSF EEEECHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCEEEE QTCSASGIPSNFSGSATITSSGAPIVAIGKVFSGSPAYAALATAFVGASAGASKLAAPYV EECCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCHHHCCCCE RWTQTRFDINPGNRQRAFIAIQNVGSGASGTITVKYYDLNGNLIGTHTISSINSGQKTNS EEEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCC TPIAATPAAGKTTADLAEFGYIGGFGGSATIECAGTGCQIVAVVRIASANSATNTADIVA CCEEECCCCCCCHHHHHHHCCEECCCCCEEEEECCCCEEEEEEEEEECCCCCCCCEEEEE EDYNAIPIN CCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA