| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is hbpA [H]
Identifier: 222524758
GI number: 222524758
Start: 1878854
End: 1880473
Strand: Direct
Name: hbpA [H]
Synonym: Chy400_1485
Alternate gene names: 222524758
Gene position: 1878854-1880473 (Clockwise)
Preceding gene: 222524757
Following gene: 222524759
Centisome position: 35.66
GC content: 57.9
Gene sequence:
>1620_bases ATGAGTTCTGCGGACGAACGACTGCACCTGTTGCAGGTGGCCCGTTCTGAAGTCCTGGCCGGCAGGATGAGCCGACGAGC CTTTCTGCGTCTGGGTCTGGCCCTTGGCTTATCTGCGGGTGCAACTGCGCTGGCTGCTTGTGGCGGTGGCGCATCTACGC CGGCCCCTGCATCACCTCCACCATCGCCAGCCGCCGGCCCAACGGGGCGTTTACGGGTGGCGAGCGAGATTCCCGTTCAA CTCGATCCGGCATTCGCCTCATCTGATGCCGAAATCCTCATTCTCAACCACGTGTACGATTATCTGGTTGACATTGATGC GAGCAATGCTATCGTGCCCCGGCTGGCACGGGAATGGACGATCAGCGACGATGGTTTGCGTTATCGGCTCAACCTGGCCA CCGGAGTTTCCTTTCACGATGGCAGTCCGCTCACGGCGGCAGATGTGGTCTGGACGTTTAACCGACTGCGTGATCCAGCG TTGCAGTTACCAACCGCCGATCTCTACGCCAACATTGCCGATATTGCCGCTGATGGCGATAGCGCGGTCGTCTTCACACT TACCGAGCCAAATCCATTCTTTCTGTACGACCTGTCTGATAACCACGCCCTGATTCTGCTCGCCAATACCGAGAATCCGG CAACAGCGTTTAACGGCACCGGCCCCTTCAAAGTGGTGGAATACCGCACCGAGAATCGGATCGATCTGACGGCAAATACG GCCTATTTCCAGTCCGGCAAGCCAGCCGTTGCCAGCCTTGAGATTATCTTTTTTGCCGATCAGGCCGCAGCAGTCGATGC CTTACGTGGCGGGCAGGTTGATCTGGTGCTGCGCATGCCCACGCCACTCTTCCAGACATTGCAACAAGCGGGTGGTGTCG TTACCGTCCAGACACCTACAAATGGCTTTGATCTGGTACGCCTGCGGGCCGACCGTGAGCCGGGTAATAAGCCAGAGGTT ATTCGGGCGCTTAAGCTGGCAACTGATCGTGACGCGATCTTTCGCCAGGTCAAAGCCGGCCTTGGGGCGGTCGGGCGTGA TAGTCCCATCGGCCCTCTCTTCAGCGCGTATTATTCGGAAGAGACACCGCTGCCGGCCCGTGATCCGGCTACGGCCAGGC AATTGCTGGCAACCGCCGGGTATCCTGATGGCTTGCAACTCGATCTCCACGTGCCCGATTCGGGGGATCGGCCCGATCTG GCGGTGGTGCTCAAGGAGCAATGGGCTGAAGCCGGCATCAACATCAATGTGATTGTCGAACCGGAAAGTGTGTACTATGG TGATAACGGATGGCTTGAGGTTGATTTGGGAATTACCGGTTGGGGTTCGCGACCGATTCCACAGTTCTACCTCGACGTCA TGCTCGTTAGCGGTGCCGTATGGAATGAGAGTCATTTCAGCGATCCCGAGTTTGATGCCCTGGCAGCCACAGCCCGTACT ACCCTCAATGAGGAAGAACGGGTACGCGCCTACCGCGAGATTCAGCGTATTCTGATCGAACGCGGCCCAATTATCATTCC CTATTTCTTCGCGCAACTCAGTGCGCATCGTGAAGGGCTGCGCGGTTATGTAGCGAAAGCATTTCCGGGCCGTACCGATC TGGCGGCAATCGCGGTGTGA
Upstream 100 bases:
>100_bases GCTCGATCATCCCATTTGCCCGATCATGCGCTCAAAAGTCATCGCTGACGCACAGGAGGTTGTGCCAGGATCATTTGCAT TAGAAGGAAAGGACAGTTTC
Downstream 100 bases:
>100_bases TCCTGGAAGGATACGAGGAGTTGGGCTGCTAAATCATATAGTGGCCTGGTGTGACCAAAGCCGTTCGGTGCAGATCATGA TGGACGCGGAAGCGTGGCTT
Product: 4-phytase
Products: NA
Alternate protein names: Hemin-binding lipoprotein [H]
Number of amino acids: Translated: 539; Mature: 538
Protein sequence:
>539_residues MSSADERLHLLQVARSEVLAGRMSRRAFLRLGLALGLSAGATALAACGGGASTPAPASPPPSPAAGPTGRLRVASEIPVQ LDPAFASSDAEILILNHVYDYLVDIDASNAIVPRLAREWTISDDGLRYRLNLATGVSFHDGSPLTAADVVWTFNRLRDPA LQLPTADLYANIADIAADGDSAVVFTLTEPNPFFLYDLSDNHALILLANTENPATAFNGTGPFKVVEYRTENRIDLTANT AYFQSGKPAVASLEIIFFADQAAAVDALRGGQVDLVLRMPTPLFQTLQQAGGVVTVQTPTNGFDLVRLRADREPGNKPEV IRALKLATDRDAIFRQVKAGLGAVGRDSPIGPLFSAYYSEETPLPARDPATARQLLATAGYPDGLQLDLHVPDSGDRPDL AVVLKEQWAEAGININVIVEPESVYYGDNGWLEVDLGITGWGSRPIPQFYLDVMLVSGAVWNESHFSDPEFDALAATART TLNEEERVRAYREIQRILIERGPIIIPYFFAQLSAHREGLRGYVAKAFPGRTDLAAIAV
Sequences:
>Translated_539_residues MSSADERLHLLQVARSEVLAGRMSRRAFLRLGLALGLSAGATALAACGGGASTPAPASPPPSPAAGPTGRLRVASEIPVQ LDPAFASSDAEILILNHVYDYLVDIDASNAIVPRLAREWTISDDGLRYRLNLATGVSFHDGSPLTAADVVWTFNRLRDPA LQLPTADLYANIADIAADGDSAVVFTLTEPNPFFLYDLSDNHALILLANTENPATAFNGTGPFKVVEYRTENRIDLTANT AYFQSGKPAVASLEIIFFADQAAAVDALRGGQVDLVLRMPTPLFQTLQQAGGVVTVQTPTNGFDLVRLRADREPGNKPEV IRALKLATDRDAIFRQVKAGLGAVGRDSPIGPLFSAYYSEETPLPARDPATARQLLATAGYPDGLQLDLHVPDSGDRPDL AVVLKEQWAEAGININVIVEPESVYYGDNGWLEVDLGITGWGSRPIPQFYLDVMLVSGAVWNESHFSDPEFDALAATART TLNEEERVRAYREIQRILIERGPIIIPYFFAQLSAHREGLRGYVAKAFPGRTDLAAIAV >Mature_538_residues SSADERLHLLQVARSEVLAGRMSRRAFLRLGLALGLSAGATALAACGGGASTPAPASPPPSPAAGPTGRLRVASEIPVQL DPAFASSDAEILILNHVYDYLVDIDASNAIVPRLAREWTISDDGLRYRLNLATGVSFHDGSPLTAADVVWTFNRLRDPAL QLPTADLYANIADIAADGDSAVVFTLTEPNPFFLYDLSDNHALILLANTENPATAFNGTGPFKVVEYRTENRIDLTANTA YFQSGKPAVASLEIIFFADQAAAVDALRGGQVDLVLRMPTPLFQTLQQAGGVVTVQTPTNGFDLVRLRADREPGNKPEVI RALKLATDRDAIFRQVKAGLGAVGRDSPIGPLFSAYYSEETPLPARDPATARQLLATAGYPDGLQLDLHVPDSGDRPDLA VVLKEQWAEAGININVIVEPESVYYGDNGWLEVDLGITGWGSRPIPQFYLDVMLVSGAVWNESHFSDPEFDALAATARTT LNEEERVRAYREIQRILIERGPIIIPYFFAQLSAHREGLRGYVAKAFPGRTDLAAIAV
Specific function: Important role in heme acquisition or metabolism [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=464, Percent_Identity=26.2931034482759, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1789966, Length=548, Percent_Identity=23.5401459854015, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1787551, Length=523, Percent_Identity=23.5181644359465, Blast_Score=105, Evalue=8e-24, Organism=Escherichia coli, GI1787495, Length=549, Percent_Identity=23.6794171220401, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI87081878, Length=488, Percent_Identity=24.3852459016393, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1787762, Length=503, Percent_Identity=24.4532803180915, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1789397, Length=467, Percent_Identity=22.4839400428266, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1789887, Length=428, Percent_Identity=24.0654205607477, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 58126; Mature: 57995
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSADERLHLLQVARSEVLAGRMSRRAFLRLGLALGLSAGATALAACGGGASTPAPASPP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCC PSPAAGPTGRLRVASEIPVQLDPAFASSDAEILILNHVYDYLVDIDASNAIVPRLAREWT CCCCCCCCCCEEEEECCCEEECCCCCCCCCCEEEEEHHHHHHEECCCCCCHHHHHHHHEE ISDDGLRYRLNLATGVSFHDGSPLTAADVVWTFNRLRDPALQLPTADLYANIADIAADGD CCCCCEEEEEEEEECCEECCCCCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCCC SAVVFTLTEPNPFFLYDLSDNHALILLANTENPATAFNGTGPFKVVEYRTENRIDLTANT CEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCEEECCCCCEEEEEEECCCEEEEEECE AYFQSGKPAVASLEIIFFADQAAAVDALRGGQVDLVLRMPTPLFQTLQQAGGVVTVQTPT EEECCCCCCEEEEEEEEEECCHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCEEEEECCC NGFDLVRLRADREPGNKPEVIRALKLATDRDAIFRQVKAGLGAVGRDSPIGPLFSAYYSE CCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC ETPLPARDPATARQLLATAGYPDGLQLDLHVPDSGDRPDLAVVLKEQWAEAGININVIVE CCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEHHHHHCCCEEEEEEC PESVYYGDNGWLEVDLGITGWGSRPIPQFYLDVMLVSGAVWNESHFSDPEFDALAATART CCEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHH TLNEEERVRAYREIQRILIERGPIIIPYFFAQLSAHREGLRGYVAKAFPGRTDLAAIAV HCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC >Mature Secondary Structure SSADERLHLLQVARSEVLAGRMSRRAFLRLGLALGLSAGATALAACGGGASTPAPASPP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCC PSPAAGPTGRLRVASEIPVQLDPAFASSDAEILILNHVYDYLVDIDASNAIVPRLAREWT CCCCCCCCCCEEEEECCCEEECCCCCCCCCCEEEEEHHHHHHEECCCCCCHHHHHHHHEE ISDDGLRYRLNLATGVSFHDGSPLTAADVVWTFNRLRDPALQLPTADLYANIADIAADGD CCCCCEEEEEEEEECCEECCCCCCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCCC SAVVFTLTEPNPFFLYDLSDNHALILLANTENPATAFNGTGPFKVVEYRTENRIDLTANT CEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCEEECCCCCEEEEEEECCCEEEEEECE AYFQSGKPAVASLEIIFFADQAAAVDALRGGQVDLVLRMPTPLFQTLQQAGGVVTVQTPT EEECCCCCCEEEEEEEEEECCHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCEEEEECCC NGFDLVRLRADREPGNKPEVIRALKLATDRDAIFRQVKAGLGAVGRDSPIGPLFSAYYSE CCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC ETPLPARDPATARQLLATAGYPDGLQLDLHVPDSGDRPDLAVVLKEQWAEAGININVIVE CCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEHHHHHCCCEEEEEEC PESVYYGDNGWLEVDLGITGWGSRPIPQFYLDVMLVSGAVWNESHFSDPEFDALAATART CCEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHH TLNEEERVRAYREIQRILIERGPIIIPYFFAQLSAHREGLRGYVAKAFPGRTDLAAIAV HCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1339409; 7542800; 2041470 [H]