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The map label for this gene is lpsE [H]

Identifier: 222524639

GI number: 222524639

Start: 1745762

End: 1747039

Strand: Direct

Name: lpsE [H]

Synonym: Chy400_1364

Alternate gene names: 222524639

Gene position: 1745762-1747039 (Clockwise)

Preceding gene: 222524638

Following gene: 222524645

Centisome position: 33.13

GC content: 62.6

Gene sequence:

>1278_bases
ATGCACATTCTCCACGTTGTTCAACTCTACTGGCCGGCGCCAAGCGGCGCGGCCCGTTATTTTCAAGAAATCGGGAAGCG
GCTGGTCGCTGAAGGCCATCGCGTTACCGTGCTGGCAACTGACGCCTTCGATCTCGAACACCTCTGGATGGCCGGGAAGC
GCCGGATTCCTGAACCGGTCGGTGAGCACGATGGCGTCGTTATACGGCGTCTGCCGATCCGACGGCTGCCTGCGCCAGCT
ATCCTCTACCCCATCATCCGCCGCCTGATGGTGGAATTGGGCCGGCTGGGCCGTCCCGCCATCCCGACCCTCCGTCGATT
GGCTACCGTAACCCCACAGCTTCCCGATCTGGAGGCATTCCTGGCCGACCCCTATCTCGCCGATGTCGCGGTGGTGCATA
CTACCAACATCACCCTCGATTTTGCGCTCATCCCGGTTGTGCGCTGGGCAAGGCGGCGTGGTCTGCCCCACCTTTGTACC
CCCTTCGTGCATTTGGGCGAACCGGGAAGTGAGCAGGTGGTACGCTACTATGCGATGCCACATCAGCTTGATCTGTTGCG
GCAGGCAACCTGGGTGGCGACGATGACCGATCTGGAGCGGGCATACCTGATACGGCGTGGAGTGGCGGCACAACAGATCG
TGACGGTTGGGGCAGGGGTGAACCCGGCTGAAGTGACCGGCGGTGACGGTCAGCGCTTCCGCGCAATCCATCACATCCAT
GGCCCGCTGGTTCTGAGCCTGGGGGTTGCCGCTTTCGATAAGGGTACCGTGCATACGCTGGCTGCGATGCGTCAGTTGTG
GGCACAGGGTAGTCATGCGGTGTGGGTGCAGTGTGGGCCGGCCTTTGGCGGTTTTGCCGAGACAGTCGCCGCCCTCAGCC
CGGATGAACAGGCGCGAGTGCGGGTGCTCGGTTATGTTGATGATACAACGCGCCGTGATGCACTGGCGGCAGCCGATCTT
TACGTGCAACCGTCACGCACTGATAGCTTCGGGATTACGTACCTTGAAGCGTGGTGTAACGGGGTTCCGGTGATCGGCGC
CCGTGCCGGGGGCGTCCCTGCGGTTGTGCGGCACGGTGTTGATGGCTTGCTGGTGCGGTTTGGCGATGTGCCGGGTATCG
CAGCGGCTATCGACCGCTTACTGCGTGATAGAGCACTTGCCCGCGCTCTCGGTGCTGCCGGACGAGCGCGGGTCTGGCGC
GAGTTAACCTGGGATGCCGTCTATCAGCGGATTCGCCCGCTCTACATGCCTCACTTCAGCGAACATCGTCGCGGGTGA

Upstream 100 bases:

>100_bases
CCATCCCATACCTGCTTGCGTAGCCCCTCAGATTTGTTATGATGCTGCCAGCACTGATTGCAACAGACCGGTAGTGATCA
TAACAAGGTGCTGATACTGC

Downstream 100 bases:

>100_bases
TTTCCATGAGAATACGGTCGTAGCGCTGGCCGTCGAATAGCGTTGCCCCGCGCAGCCGGCCTGCCTCGCGAAAGCCGGCT
GCCAGGTAAGCGCGACGGGC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MHILHVVQLYWPAPSGAARYFQEIGKRLVAEGHRVTVLATDAFDLEHLWMAGKRRIPEPVGEHDGVVIRRLPIRRLPAPA
ILYPIIRRLMVELGRLGRPAIPTLRRLATVTPQLPDLEAFLADPYLADVAVVHTTNITLDFALIPVVRWARRRGLPHLCT
PFVHLGEPGSEQVVRYYAMPHQLDLLRQATWVATMTDLERAYLIRRGVAAQQIVTVGAGVNPAEVTGGDGQRFRAIHHIH
GPLVLSLGVAAFDKGTVHTLAAMRQLWAQGSHAVWVQCGPAFGGFAETVAALSPDEQARVRVLGYVDDTTRRDALAAADL
YVQPSRTDSFGITYLEAWCNGVPVIGARAGGVPAVVRHGVDGLLVRFGDVPGIAAAIDRLLRDRALARALGAAGRARVWR
ELTWDAVYQRIRPLYMPHFSEHRRG

Sequences:

>Translated_425_residues
MHILHVVQLYWPAPSGAARYFQEIGKRLVAEGHRVTVLATDAFDLEHLWMAGKRRIPEPVGEHDGVVIRRLPIRRLPAPA
ILYPIIRRLMVELGRLGRPAIPTLRRLATVTPQLPDLEAFLADPYLADVAVVHTTNITLDFALIPVVRWARRRGLPHLCT
PFVHLGEPGSEQVVRYYAMPHQLDLLRQATWVATMTDLERAYLIRRGVAAQQIVTVGAGVNPAEVTGGDGQRFRAIHHIH
GPLVLSLGVAAFDKGTVHTLAAMRQLWAQGSHAVWVQCGPAFGGFAETVAALSPDEQARVRVLGYVDDTTRRDALAAADL
YVQPSRTDSFGITYLEAWCNGVPVIGARAGGVPAVVRHGVDGLLVRFGDVPGIAAAIDRLLRDRALARALGAAGRARVWR
ELTWDAVYQRIRPLYMPHFSEHRRG
>Mature_425_residues
MHILHVVQLYWPAPSGAARYFQEIGKRLVAEGHRVTVLATDAFDLEHLWMAGKRRIPEPVGEHDGVVIRRLPIRRLPAPA
ILYPIIRRLMVELGRLGRPAIPTLRRLATVTPQLPDLEAFLADPYLADVAVVHTTNITLDFALIPVVRWARRRGLPHLCT
PFVHLGEPGSEQVVRYYAMPHQLDLLRQATWVATMTDLERAYLIRRGVAAQQIVTVGAGVNPAEVTGGDGQRFRAIHHIH
GPLVLSLGVAAFDKGTVHTLAAMRQLWAQGSHAVWVQCGPAFGGFAETVAALSPDEQARVRVLGYVDDTTRRDALAAADL
YVQPSRTDSFGITYLEAWCNGVPVIGARAGGVPAVVRHGVDGLLVRFGDVPGIAAAIDRLLRDRALARALGAAGRARVWR
ELTWDAVYQRIRPLYMPHFSEHRRG

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 46900; Mature: 46900

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILHVVQLYWPAPSGAARYFQEIGKRLVAEGHRVTVLATDAFDLEHLWMAGKRRIPEPV
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCCCCC
GEHDGVVIRRLPIRRLPAPAILYPIIRRLMVELGRLGRPAIPTLRRLATVTPQLPDLEAF
CCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHH
LADPYLADVAVVHTTNITLDFALIPVVRWARRRGLPHLCTPFVHLGEPGSEQVVRYYAMP
HCCCHHHCEEEEEEECEEEHHHHHHHHHHHHHCCCCCHHCCHHCCCCCCHHHHHHHHCCC
HQLDLLRQATWVATMTDLERAYLIRRGVAAQQIVTVGAGVNPAEVTGGDGQRFRAIHHIH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCCEECCCCCHHHHHHHHHC
GPLVLSLGVAAFDKGTVHTLAAMRQLWAQGSHAVWVQCGPAFGGFAETVAALSPDEQARV
CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCCEE
RVLGYVDDTTRRDALAAADLYVQPSRTDSFGITYLEAWCNGVPVIGARAGGVPAVVRHGV
EEEEEECCCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHCCC
DGLLVRFGDVPGIAAAIDRLLRDRALARALGAAGRARVWRELTWDAVYQRIRPLYMPHFS
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
EHRRG
HHCCC
>Mature Secondary Structure
MHILHVVQLYWPAPSGAARYFQEIGKRLVAEGHRVTVLATDAFDLEHLWMAGKRRIPEPV
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCCCCC
GEHDGVVIRRLPIRRLPAPAILYPIIRRLMVELGRLGRPAIPTLRRLATVTPQLPDLEAF
CCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHH
LADPYLADVAVVHTTNITLDFALIPVVRWARRRGLPHLCTPFVHLGEPGSEQVVRYYAMP
HCCCHHHCEEEEEEECEEEHHHHHHHHHHHHHCCCCCHHCCHHCCCCCCHHHHHHHHCCC
HQLDLLRQATWVATMTDLERAYLIRRGVAAQQIVTVGAGVNPAEVTGGDGQRFRAIHHIH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCCEECCCCCHHHHHHHHHC
GPLVLSLGVAAFDKGTVHTLAAMRQLWAQGSHAVWVQCGPAFGGFAETVAALSPDEQARV
CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCCEE
RVLGYVDDTTRRDALAAADLYVQPSRTDSFGITYLEAWCNGVPVIGARAGGVPAVVRHGV
EEEEEECCCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHCCC
DGLLVRFGDVPGIAAAIDRLLRDRALARALGAAGRARVWRELTWDAVYQRIRPLYMPHFS
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
EHRRG
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]