| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222524273
Identifier: 222524273
GI number: 222524273
Start: 1274423
End: 1275490
Strand: Reverse
Name: 222524273
Synonym: Chy400_0996
Alternate gene names: NA
Gene position: 1275490-1274423 (Counterclockwise)
Preceding gene: 222524274
Following gene: 222524272
Centisome position: 24.21
GC content: 49.34
Gene sequence:
>1068_bases ATGTTTCTCAGCAATCATCGTCACTCGCTATGGATCACCTGCTGGGGATTGGTGTGGATACTATTGTTGCTTTCGCAGCC GACTGCTGCTCAATCAACGCAGCCCCAGATGCAGGTAGGTGATCACATCACGATCACGGGCCGGATTGAAGTGACATTTA CCGGGTTGCCCTCGACCATAGACAAAATACGCTGGAGTTGGAACCAGGAACCTACCGATGAGGTAAGCTGGCGATGGATC GAGGTTGAGGATGGCAACGCCACCAAATGGGTCAATCCACCTCCCGATTACAACAATTACGATCCTGAAGCACCGCCGAT ACTCTATGTGCAATTGCTTGATCTTGATGGGACAATCATCTCACTGAATGCACCGTTCATCAGAGCACGACCGATTGAGG TAACAATGGAATTACTACCACCTGAACGGGCTATGAGCGGTTATACCAATCAGAACCATGTGAATGTTCGTCTCGTTAAC ATCTTCGGGGGTAAACAAGGATATGTGGCAATCCCGCACCCAGATGAACTTGTCATCCACGATTTTTTCTTCAACGATCA GCCAGCTCTCCAACCGGAGTATCCGTTGCCGGCATTAGAGGGAGAAATCTTAATTTATGTTGCAGTATGGGGAGAAGAGA CTGCAAACTCGAAAAGTGACTGGTTTTCCCTGATTCGCGACATCACTCCGCCGACGTTAACGCACACTCAGGCCGACGTA GATACGGCTGGAACACCTGCCCGATTGGTGATGAGTGGACGGTTTACCGACAAATACGCTCCCTTACCGCACGCTATTGA GTGGCAATTTGTTGCCTCAGATGGATCGACCATTGGGAGTCCGGTGTTTCATGTATTGAGTGAGACTGAGGTTGGGGCAA TAACTACGGCTGTTCTTAGCACAGAAGGCACACCGTATCAACTGCAGGTTACCTTAGACACCATTCCTGTGGAAGCGCGT ATGCTTCAAGTCAGGCTATTTGATCGGGCTGGTAATTCGCAAGCTATAGAACCAATTCAACTACCTAATACCTCACACAC CGTACACATTCCTTTCGTCGGACGATAG
Upstream 100 bases:
>100_bases GGGGGGATACATTGGGTCATGGATGGGAAGCAGGGAATGGCGTTAGGGAGTGAAGTTGCCCGTTATGTACTGAGCCGCTA ATTGAAGAGGAGTTACAACG
Downstream 100 bases:
>100_bases GTATTTCCCTGACAGGAGAACAGGCACTCATCGGGTGACGCTAGAGGCGTCGCCTTGGGTGAGTGCATGTCCGAAAACAA GGTAAGGAGACGCAGCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MFLSNHRHSLWITCWGLVWILLLLSQPTAAQSTQPQMQVGDHITITGRIEVTFTGLPSTIDKIRWSWNQEPTDEVSWRWI EVEDGNATKWVNPPPDYNNYDPEAPPILYVQLLDLDGTIISLNAPFIRARPIEVTMELLPPERAMSGYTNQNHVNVRLVN IFGGKQGYVAIPHPDELVIHDFFFNDQPALQPEYPLPALEGEILIYVAVWGEETANSKSDWFSLIRDITPPTLTHTQADV DTAGTPARLVMSGRFTDKYAPLPHAIEWQFVASDGSTIGSPVFHVLSETEVGAITTAVLSTEGTPYQLQVTLDTIPVEAR MLQVRLFDRAGNSQAIEPIQLPNTSHTVHIPFVGR
Sequences:
>Translated_355_residues MFLSNHRHSLWITCWGLVWILLLLSQPTAAQSTQPQMQVGDHITITGRIEVTFTGLPSTIDKIRWSWNQEPTDEVSWRWI EVEDGNATKWVNPPPDYNNYDPEAPPILYVQLLDLDGTIISLNAPFIRARPIEVTMELLPPERAMSGYTNQNHVNVRLVN IFGGKQGYVAIPHPDELVIHDFFFNDQPALQPEYPLPALEGEILIYVAVWGEETANSKSDWFSLIRDITPPTLTHTQADV DTAGTPARLVMSGRFTDKYAPLPHAIEWQFVASDGSTIGSPVFHVLSETEVGAITTAVLSTEGTPYQLQVTLDTIPVEAR MLQVRLFDRAGNSQAIEPIQLPNTSHTVHIPFVGR >Mature_355_residues MFLSNHRHSLWITCWGLVWILLLLSQPTAAQSTQPQMQVGDHITITGRIEVTFTGLPSTIDKIRWSWNQEPTDEVSWRWI EVEDGNATKWVNPPPDYNNYDPEAPPILYVQLLDLDGTIISLNAPFIRARPIEVTMELLPPERAMSGYTNQNHVNVRLVN IFGGKQGYVAIPHPDELVIHDFFFNDQPALQPEYPLPALEGEILIYVAVWGEETANSKSDWFSLIRDITPPTLTHTQADV DTAGTPARLVMSGRFTDKYAPLPHAIEWQFVASDGSTIGSPVFHVLSETEVGAITTAVLSTEGTPYQLQVTLDTIPVEAR MLQVRLFDRAGNSQAIEPIQLPNTSHTVHIPFVGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39762; Mature: 39762
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLSNHRHSLWITCWGLVWILLLLSQPTAAQSTQPQMQVGDHITITGRIEVTFTGLPSTI CCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEEEEEEEEECCCCCCH DKIRWSWNQEPTDEVSWRWIEVEDGNATKWVNPPPDYNNYDPEAPPILYVQLLDLDGTII HHHEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEE SLNAPFIRARPIEVTMELLPPERAMSGYTNQNHVNVRLVNIFGGKQGYVAIPHPDELVIH EECCCEEEECCEEEEEEECCCHHHHCCCCCCCEEEEEEEEEECCCCCEEECCCCCCEEEE DFFFNDQPALQPEYPLPALEGEILIYVAVWGEETANSKSDWFSLIRDITPPTLTHTQADV EEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEECCCCCC DTAGTPARLVMSGRFTDKYAPLPHAIEWQFVASDGSTIGSPVFHVLSETEVGAITTAVLS CCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEE TEGTPYQLQVTLDTIPVEARMLQVRLFDRAGNSQAIEPIQLPNTSHTVHIPFVGR CCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCEEECCCCCCEEEEEECCC >Mature Secondary Structure MFLSNHRHSLWITCWGLVWILLLLSQPTAAQSTQPQMQVGDHITITGRIEVTFTGLPSTI CCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEEEEEEEEECCCCCCH DKIRWSWNQEPTDEVSWRWIEVEDGNATKWVNPPPDYNNYDPEAPPILYVQLLDLDGTII HHHEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEE SLNAPFIRARPIEVTMELLPPERAMSGYTNQNHVNVRLVNIFGGKQGYVAIPHPDELVIH EECCCEEEECCEEEEEEECCCHHHHCCCCCCCEEEEEEEEEECCCCCEEECCCCCCEEEE DFFFNDQPALQPEYPLPALEGEILIYVAVWGEETANSKSDWFSLIRDITPPTLTHTQADV EEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEECCCCCC DTAGTPARLVMSGRFTDKYAPLPHAIEWQFVASDGSTIGSPVFHVLSETEVGAITTAVLS CCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEE TEGTPYQLQVTLDTIPVEARMLQVRLFDRAGNSQAIEPIQLPNTSHTVHIPFVGR CCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCEEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA