| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524263
Identifier: 222524263
GI number: 222524263
Start: 1259881
End: 1260807
Strand: Reverse
Name: 222524263
Synonym: Chy400_0986
Alternate gene names: NA
Gene position: 1260807-1259881 (Counterclockwise)
Preceding gene: 222524264
Following gene: 222524262
Centisome position: 23.93
GC content: 61.27
Gene sequence:
>927_bases ATGCCTGGCATTGACTCGCTCACCCATCCCGAAACGGCCTGGCTGGTACGTGCGGTGCCGGCTTTGCTGGCTGCATTGAT TACCATGACCGCTACCTTTATCTTCCGGCAACCCCTCATGCAGTTCCTTGCCCGGTTTGATCGCTCGCGTTCGCCAGCGG TCTGCGATCCGGCGCTAGTCTGGCGGCCAGCGCTGTTGGGAACGAATACGGCCTTGCTGCTGGCCGGCGGAGCGGCGACG TTGAGTAGTCTGGTATTGGGATGGATTGGCTCAATCTGGTTTGCGCTGGTGGCTGCGCCGGTGGTGGCAGCGCTGGTTGT GCGTATCGGTTTTGCCGTTAGCCAATCACGTTATAATCGGCACCTGGAACGGGAACTGACTCCGGCCATTGGTCGCCTCA GTGCTTTGCTCAGTGGCGGTTTAGGTCTTCGTACTGCCCTGGAGCGTGTCCTGACCGATATGGGTGATGGGCCACTACGC GACGAGTGGCGGTGGTTACTTCGACAACAGGGGACACCGCTCGCCGACGGGAGCATTGCAACACTTCGTCAGGTTATTGC AGCATTGGCCGCCCAAACCTCAGCGTCGCGCCACGCAACCCTGCTCAACCACCTGGCGGTTGCCGCCGATCAGCCGCAAG ACTTGCAGGCCCGGCGCTGCGCTGCGGCTTACGCCGCGCTTCAGGTGTCGGAACGACGGCGGGAAGAGGCACTGACCGAA CTGGCCCAGATGCGCTACAGCGGTCTGGCCGTCGGTGGGGCAGGGTGTCTGATGGCCCTATACCTGATCGCGACCCAATG GGAGCGGGTACGGATCGCGTATAGCACTCCGCTGGGGATGGTTTTTGCCGTCATCGTGACCCTGGCTTTGCTGGCACCGA TGATCGGTGGCTTCCTGTTCTCACAGGTCGAGGATGTTGATTATTAG
Upstream 100 bases:
>100_bases GCCGGTGGCGGCTGCCCTGCGTATGCGCGAAGCGTTGGTAACTGCTCAGGGAAGCAGTTGTGCGTGATGAGGCTCTGTAC TGCCGAGAAAGGATAATGAT
Downstream 100 bases:
>100_bases GTATCGAGGTACTCATCGTTACTCAGGAGCTGCATATGCCTCATCTACTCACAACACCTGCGGCACCGGCGTTGCTGGCA GCGTTTTGTGGCACCTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MPGIDSLTHPETAWLVRAVPALLAALITMTATFIFRQPLMQFLARFDRSRSPAVCDPALVWRPALLGTNTALLLAGGAAT LSSLVLGWIGSIWFALVAAPVVAALVVRIGFAVSQSRYNRHLERELTPAIGRLSALLSGGLGLRTALERVLTDMGDGPLR DEWRWLLRQQGTPLADGSIATLRQVIAALAAQTSASRHATLLNHLAVAADQPQDLQARRCAAAYAALQVSERRREEALTE LAQMRYSGLAVGGAGCLMALYLIATQWERVRIAYSTPLGMVFAVIVTLALLAPMIGGFLFSQVEDVDY
Sequences:
>Translated_308_residues MPGIDSLTHPETAWLVRAVPALLAALITMTATFIFRQPLMQFLARFDRSRSPAVCDPALVWRPALLGTNTALLLAGGAAT LSSLVLGWIGSIWFALVAAPVVAALVVRIGFAVSQSRYNRHLERELTPAIGRLSALLSGGLGLRTALERVLTDMGDGPLR DEWRWLLRQQGTPLADGSIATLRQVIAALAAQTSASRHATLLNHLAVAADQPQDLQARRCAAAYAALQVSERRREEALTE LAQMRYSGLAVGGAGCLMALYLIATQWERVRIAYSTPLGMVFAVIVTLALLAPMIGGFLFSQVEDVDY >Mature_307_residues PGIDSLTHPETAWLVRAVPALLAALITMTATFIFRQPLMQFLARFDRSRSPAVCDPALVWRPALLGTNTALLLAGGAATL SSLVLGWIGSIWFALVAAPVVAALVVRIGFAVSQSRYNRHLERELTPAIGRLSALLSGGLGLRTALERVLTDMGDGPLRD EWRWLLRQQGTPLADGSIATLRQVIAALAAQTSASRHATLLNHLAVAADQPQDLQARRCAAAYAALQVSERRREEALTEL AQMRYSGLAVGGAGCLMALYLIATQWERVRIAYSTPLGMVFAVIVTLALLAPMIGGFLFSQVEDVDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33183; Mature: 33052
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGIDSLTHPETAWLVRAVPALLAALITMTATFIFRQPLMQFLARFDRSRSPAVCDPALV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH WRPALLGTNTALLLAGGAATLSSLVLGWIGSIWFALVAAPVVAALVVRIGFAVSQSRYNR HHHHHHCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLERELTPAIGRLSALLSGGLGLRTALERVLTDMGDGPLRDEWRWLLRQQGTPLADGSIA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHH TLRQVIAALAAQTSASRHATLLNHLAVAADQPQDLQARRCAAAYAALQVSERRREEALTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAQMRYSGLAVGGAGCLMALYLIATQWERVRIAYSTPLGMVFAVIVTLALLAPMIGGFLF HHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH SQVEDVDY HHHHHCCC >Mature Secondary Structure PGIDSLTHPETAWLVRAVPALLAALITMTATFIFRQPLMQFLARFDRSRSPAVCDPALV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH WRPALLGTNTALLLAGGAATLSSLVLGWIGSIWFALVAAPVVAALVVRIGFAVSQSRYNR HHHHHHCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLERELTPAIGRLSALLSGGLGLRTALERVLTDMGDGPLRDEWRWLLRQQGTPLADGSIA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHH TLRQVIAALAAQTSASRHATLLNHLAVAADQPQDLQARRCAAAYAALQVSERRREEALTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAQMRYSGLAVGGAGCLMALYLIATQWERVRIAYSTPLGMVFAVIVTLALLAPMIGGFLF HHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH SQVEDVDY HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA