| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is cadA [H]
Identifier: 222524221
GI number: 222524221
Start: 1187091
End: 1189277
Strand: Reverse
Name: cadA [H]
Synonym: Chy400_0942
Alternate gene names: 222524221
Gene position: 1189277-1187091 (Counterclockwise)
Preceding gene: 222524224
Following gene: 222524218
Centisome position: 22.57
GC content: 60.36
Gene sequence:
>2187_bases ATGAACAAACAGCAGTTTACGATTAGCGGGATGGATTGCCCGGATTGTGCGCGGAAGATTGAACGGGGAGTCGCACGATT GCCGGGTGTGACGACGTGCGAGCTGCATTTTACCACTGCCCGCTTGCACGTAGCCGGTGATGTAGATCCGGCGACAGTGA TTGCGCGGGTACGCGATTTGGGGTACGACATTCAGGCTGAGGCCAGCTCCGGCGATGAGTTACCTCCGACGTTTTTACGT TTTATGCTAAGCCGCCGGGAGACCCAACTGGCCTTGATCGGTCTGGTGCTGGTATTGCCGGGGATAGTACTCCACGAAGT GCTCGGTTGGGATGCGTTGTGGATAGAGGTGCTATCGCTGCTGGCGCTGGCACTGGTAGGGCCGGGCATTGCCCGTCAGG CCTGGCGAACACTCCGTACCAACCGTGAGCTGGGGATTGATGCACTGATGACCATCGCTGCCATCGGGGCGGTGGTGATT GGCGCCTATGTTGAAGCCGGGCTGGTGCTGGTGCTCTACGCTATTGGCGAGGCGCTTGAAGGGTATACGGCCAATCGTGC CCGCCACGCTATTCGTAGTCTGCTAGAGCTGACGCCACCGACCGCCACACGGCTGACATCCGGCGGTGAGCAGGTGGTAC CGGTTGCCGATTTGCAGGTCGGTGATCGGATTCTGATCCGGCCCGGTGAACGGATACCGGTTGATGGCACGATTGTTGCC GGGAGTTCGCTGGTGAATCAGGCGCCGATCACCGGCGAGAGTCGGCTGGTTGAGCGCGATGTGGGGGATACACTCTTTGC GGGGACGATGAATGGCGAAGGCAGTATTGAGCTGCGTGTTGATCGCCCCGCCGCCGAGAGTGCGGTGGCCCGGATGATCC ATCTGGTGCAGGAGGCGCAGGAGCGCCGGGCACCAGTGCAACGGTTTATCGACCGCTTTGCCCGCATCTATACGCCGCTG GTCACTGCGCTGGCAGCGCTGGTTGCAATCGTACCGCCACTCGTGTTCGGGCAACCGTTCTGGAATCCCGATCCGGATAC GTTTGGCTGGCTCTACCGTGGTCTGGCACTGCTGGTCGTTGCCTGTCCGTGTGCGCTGGTCATCAGCACGCCGGTCAGTA TTGTGAGTGCGCTAAGCACAGCGGCCCGGTATGGGGTGCTGATTAAAGGTGGCGCATACCTGGAGACGCTGGCACGGGTA CAGACGATTGCGCTCGATAAGACCGGTACGCTTACGACCGGTAAACCAACCGTGGTCGGTCTGCGAGCCGTTGGTTGTCC AGCAGGCGAGGCGACTCCGGTCGGGCATTGCCGTACCTGCGATGAACTGCTTACTATTGCTGGAGCGGTCGAGCGCCGTT CTGAACATCCCCTTGCCCACGCGATTGTCGGTGCGGCGGTTAATCGTGGTCTTACCCTGCCACCAGCCGAGCAGGTACGG GCGTTGACCGGGAAAGGCGTGGTGGGGGTGGTCAATGGCGATGAAGTCTTGATCGGGAGTCATCGGGTCTTTGATCAGGC GTTGCGTCACGATGAATGGCATTGTCTCGCGGCGAAACACGATAGTCAGCTCGGCTACACGCCCCTGATGGTCGGTGTTG GTGGTCAGTATCGCGGCACGATCACCGTTGCCGATACGGTACGGGCAGAGAGCCGAAGTGCGGTGGCAGCACTCCGTGAT CAGGGCTTACGCATCGTGATGCTCACCGGTGATGAGCCGGCGACCGCCGAACGGATTGCCGGTGAGATTGGGGTGTCTGA GGTGCGCGCCGGTCTGTTGCCCGAAACCAAGGCTCAGGTGGTCAGTGCATTACGTCAGTCTGGTGGTGTCGTTGCAATGG TCGGCGACGGGATCAATGATGCGCCGGCCCTGGCAACCGCTGATGTCGGGATTGCGATGGGGGTGCAGGCCGGGGGCACG ACGCAGGCTATGGAGACTGCCGATATTACGCTGCTTGGTGGTGATTTGCGGCAGTTGCCGTTTGCAGTAGCACTTAGCCG GCAGACTATGCGCACGATCACGGCGAATATTGTCTTTAGCATTGGGATCAAGCTGATCTTTATCGTTCTGGTGCTGGCCG GTCTCAGCACGATGTGGATGGCCGTTTTGGCTGATGTGGGAGCATCGCTGCTGGTCACGCTGAACGGTATGCGCTTGTTG GGTTTTCGGGCGCGGTTGCCGCAGTAA
Upstream 100 bases:
>100_bases ACATGGTTTCATTTTCATGCATTCCCCTTGACTCGGCGACAAAATGGCGTAAAATGGAGTCGTAAGCTGAACGTTTTTGT CCTGCTGAGGAATTTCAACC
Downstream 100 bases:
>100_bases TATCAAATATTGATGGCCATCGATGTCGCGGCTTGGTAAAGGGGGGGCGGTACGCCGCAAGACGACGGTACGGCGGGTTG GTGCAGGTAGCGAGCGCGCC
Product: heavy metal translocating P-type ATPase
Products: NA
Alternate protein names: Cadmium efflux ATPase [H]
Number of amino acids: Translated: 728; Mature: 728
Protein sequence:
>728_residues MNKQQFTISGMDCPDCARKIERGVARLPGVTTCELHFTTARLHVAGDVDPATVIARVRDLGYDIQAEASSGDELPPTFLR FMLSRRETQLALIGLVLVLPGIVLHEVLGWDALWIEVLSLLALALVGPGIARQAWRTLRTNRELGIDALMTIAAIGAVVI GAYVEAGLVLVLYAIGEALEGYTANRARHAIRSLLELTPPTATRLTSGGEQVVPVADLQVGDRILIRPGERIPVDGTIVA GSSLVNQAPITGESRLVERDVGDTLFAGTMNGEGSIELRVDRPAAESAVARMIHLVQEAQERRAPVQRFIDRFARIYTPL VTALAALVAIVPPLVFGQPFWNPDPDTFGWLYRGLALLVVACPCALVISTPVSIVSALSTAARYGVLIKGGAYLETLARV QTIALDKTGTLTTGKPTVVGLRAVGCPAGEATPVGHCRTCDELLTIAGAVERRSEHPLAHAIVGAAVNRGLTLPPAEQVR ALTGKGVVGVVNGDEVLIGSHRVFDQALRHDEWHCLAAKHDSQLGYTPLMVGVGGQYRGTITVADTVRAESRSAVAALRD QGLRIVMLTGDEPATAERIAGEIGVSEVRAGLLPETKAQVVSALRQSGGVVAMVGDGINDAPALATADVGIAMGVQAGGT TQAMETADITLLGGDLRQLPFAVALSRQTMRTITANIVFSIGIKLIFIVLVLAGLSTMWMAVLADVGASLLVTLNGMRLL GFRARLPQ
Sequences:
>Translated_728_residues MNKQQFTISGMDCPDCARKIERGVARLPGVTTCELHFTTARLHVAGDVDPATVIARVRDLGYDIQAEASSGDELPPTFLR FMLSRRETQLALIGLVLVLPGIVLHEVLGWDALWIEVLSLLALALVGPGIARQAWRTLRTNRELGIDALMTIAAIGAVVI GAYVEAGLVLVLYAIGEALEGYTANRARHAIRSLLELTPPTATRLTSGGEQVVPVADLQVGDRILIRPGERIPVDGTIVA GSSLVNQAPITGESRLVERDVGDTLFAGTMNGEGSIELRVDRPAAESAVARMIHLVQEAQERRAPVQRFIDRFARIYTPL VTALAALVAIVPPLVFGQPFWNPDPDTFGWLYRGLALLVVACPCALVISTPVSIVSALSTAARYGVLIKGGAYLETLARV QTIALDKTGTLTTGKPTVVGLRAVGCPAGEATPVGHCRTCDELLTIAGAVERRSEHPLAHAIVGAAVNRGLTLPPAEQVR ALTGKGVVGVVNGDEVLIGSHRVFDQALRHDEWHCLAAKHDSQLGYTPLMVGVGGQYRGTITVADTVRAESRSAVAALRD QGLRIVMLTGDEPATAERIAGEIGVSEVRAGLLPETKAQVVSALRQSGGVVAMVGDGINDAPALATADVGIAMGVQAGGT TQAMETADITLLGGDLRQLPFAVALSRQTMRTITANIVFSIGIKLIFIVLVLAGLSTMWMAVLADVGASLLVTLNGMRLL GFRARLPQ >Mature_728_residues MNKQQFTISGMDCPDCARKIERGVARLPGVTTCELHFTTARLHVAGDVDPATVIARVRDLGYDIQAEASSGDELPPTFLR FMLSRRETQLALIGLVLVLPGIVLHEVLGWDALWIEVLSLLALALVGPGIARQAWRTLRTNRELGIDALMTIAAIGAVVI GAYVEAGLVLVLYAIGEALEGYTANRARHAIRSLLELTPPTATRLTSGGEQVVPVADLQVGDRILIRPGERIPVDGTIVA GSSLVNQAPITGESRLVERDVGDTLFAGTMNGEGSIELRVDRPAAESAVARMIHLVQEAQERRAPVQRFIDRFARIYTPL VTALAALVAIVPPLVFGQPFWNPDPDTFGWLYRGLALLVVACPCALVISTPVSIVSALSTAARYGVLIKGGAYLETLARV QTIALDKTGTLTTGKPTVVGLRAVGCPAGEATPVGHCRTCDELLTIAGAVERRSEHPLAHAIVGAAVNRGLTLPPAEQVR ALTGKGVVGVVNGDEVLIGSHRVFDQALRHDEWHCLAAKHDSQLGYTPLMVGVGGQYRGTITVADTVRAESRSAVAALRD QGLRIVMLTGDEPATAERIAGEIGVSEVRAGLLPETKAQVVSALRQSGGVVAMVGDGINDAPALATADVGIAMGVQAGGT TQAMETADITLLGGDLRQLPFAVALSRQTMRTITANIVFSIGIKLIFIVLVLAGLSTMWMAVLADVGASLLVTLNGMRLL GFRARLPQ
Specific function: This electroneutral antiporter ejects one cadmium ion while accumulating two protons by an energy-dependent efflux mechanism [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=785, Percent_Identity=28.5350318471338, Blast_Score=276, Evalue=5e-74, Organism=Homo sapiens, GI55743073, Length=553, Percent_Identity=29.8372513562387, Blast_Score=217, Evalue=3e-56, Organism=Homo sapiens, GI115529486, Length=537, Percent_Identity=25.512104283054, Blast_Score=166, Evalue=1e-40, Organism=Homo sapiens, GI118498343, Length=207, Percent_Identity=28.0193236714976, Blast_Score=77, Evalue=8e-14, Organism=Homo sapiens, GI48762691, Length=207, Percent_Identity=26.5700483091787, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI48762689, Length=207, Percent_Identity=26.5700483091787, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI48762685, Length=207, Percent_Identity=26.5700483091787, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI48762687, Length=207, Percent_Identity=26.5700483091787, Blast_Score=73, Evalue=8e-13, Organism=Escherichia coli, GI1789879, Length=731, Percent_Identity=42.8180574555404, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI1786691, Length=767, Percent_Identity=31.6818774445893, Blast_Score=316, Evalue=3e-87, Organism=Escherichia coli, GI1786914, Length=491, Percent_Identity=30.5498981670061, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI2367363, Length=185, Percent_Identity=29.7297297297297, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17556548, Length=595, Percent_Identity=30.9243697478992, Blast_Score=219, Evalue=4e-57, Organism=Caenorhabditis elegans, GI71997269, Length=176, Percent_Identity=29.5454545454545, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71997262, Length=190, Percent_Identity=28.9473684210526, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71997275, Length=190, Percent_Identity=28.9473684210526, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17554158, Length=297, Percent_Identity=23.2323232323232, Blast_Score=66, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71988506, Length=297, Percent_Identity=23.2323232323232, Blast_Score=66, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6320475, Length=557, Percent_Identity=33.0341113105925, Blast_Score=257, Evalue=5e-69, Organism=Saccharomyces cerevisiae, GI6319772, Length=568, Percent_Identity=25.5281690140845, Blast_Score=171, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6325221, Length=639, Percent_Identity=25.508607198748, Blast_Score=104, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6321430, Length=633, Percent_Identity=24.4865718799368, Blast_Score=104, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6321271, Length=209, Percent_Identity=28.7081339712919, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6321432, Length=217, Percent_Identity=28.110599078341, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI221329854, Length=583, Percent_Identity=26.5866209262436, Blast_Score=164, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR001366 - InterPro: IPR006404 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: =3.6.3.3 [H]
Molecular weight: Translated: 76924; Mature: 76924
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00154 ATPASE_E1_E2 ; PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQQFTISGMDCPDCARKIERGVARLPGVTTCELHFTTARLHVAGDVDPATVIARVRDL CCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCHHHHHHHHHHC GYDIQAEASSGDELPPTFLRFMLSRRETQLALIGLVLVLPGIVLHEVLGWDALWIEVLSL CCCEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LALALVGPGIARQAWRTLRTNRELGIDALMTIAAIGAVVIGAYVEAGLVLVLYAIGEALE HHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GYTANRARHAIRSLLELTPPTATRLTSGGEQVVPVADLQVGDRILIRPGERIPVDGTIVA CCCHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCEEEE GSSLVNQAPITGESRLVERDVGDTLFAGTMNGEGSIELRVDRPAAESAVARMIHLVQEAQ CCHHHCCCCCCCCHHHHHHCCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH ERRAPVQRFIDRFARIYTPLVTALAALVAIVPPLVFGQPFWNPDPDTFGWLYRGLALLVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ACPCALVISTPVSIVSALSTAARYGVLIKGGAYLETLARVQTIALDKTGTLTTGKPTVVG HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHEECCCCCCCCCCCCEEE LRAVGCPAGEATPVGHCRTCDELLTIAGAVERRSEHPLAHAIVGAAVNRGLTLPPAEQVR EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHH ALTGKGVVGVVNGDEVLIGSHRVFDQALRHDEWHCLAAKHDSQLGYTPLMVGVGGQYRGT HHCCCCEEEEECCCEEEECCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCEEE ITVADTVRAESRSAVAALRDQGLRIVMLTGDEPATAERIAGEIGVSEVRAGLLPETKAQV EEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCHHHHHHCCCCCHHHHH VSALRQSGGVVAMVGDGINDAPALATADVGIAMGVQAGGTTQAMETADITLLGGDLRQLP HHHHHHCCCEEEEECCCCCCCCCCEECCCCEEEECCCCCCCHHHHCCCEEEECCCHHHHH FAVALSRQTMRTITANIVFSIGIKLIFIVLVLAGLSTMWMAVLADVGASLLVTLNGMRLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEE GFRARLPQ EHHHCCCC >Mature Secondary Structure MNKQQFTISGMDCPDCARKIERGVARLPGVTTCELHFTTARLHVAGDVDPATVIARVRDL CCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCHHHHHHHHHHC GYDIQAEASSGDELPPTFLRFMLSRRETQLALIGLVLVLPGIVLHEVLGWDALWIEVLSL CCCEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LALALVGPGIARQAWRTLRTNRELGIDALMTIAAIGAVVIGAYVEAGLVLVLYAIGEALE HHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GYTANRARHAIRSLLELTPPTATRLTSGGEQVVPVADLQVGDRILIRPGERIPVDGTIVA CCCHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCEEEE GSSLVNQAPITGESRLVERDVGDTLFAGTMNGEGSIELRVDRPAAESAVARMIHLVQEAQ CCHHHCCCCCCCCHHHHHHCCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH ERRAPVQRFIDRFARIYTPLVTALAALVAIVPPLVFGQPFWNPDPDTFGWLYRGLALLVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ACPCALVISTPVSIVSALSTAARYGVLIKGGAYLETLARVQTIALDKTGTLTTGKPTVVG HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHEECCCCCCCCCCCCEEE LRAVGCPAGEATPVGHCRTCDELLTIAGAVERRSEHPLAHAIVGAAVNRGLTLPPAEQVR EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHH ALTGKGVVGVVNGDEVLIGSHRVFDQALRHDEWHCLAAKHDSQLGYTPLMVGVGGQYRGT HHCCCCEEEEECCCEEEECCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCEEE ITVADTVRAESRSAVAALRDQGLRIVMLTGDEPATAERIAGEIGVSEVRAGLLPETKAQV EEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCHHHHHHCCCCCHHHHH VSALRQSGGVVAMVGDGINDAPALATADVGIAMGVQAGGTTQAMETADITLLGGDLRQLP HHHHHHCCCEEEEECCCCCCCCCCEECCCCEEEECCCCCCCHHHHCCCEEEECCCHHHHH FAVALSRQTMRTITANIVFSIGIKLIFIVLVLAGLSTMWMAVLADVGASLLVTLNGMRLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEE GFRARLPQ EHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11302791 [H]