| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524198
Identifier: 222524198
GI number: 222524198
Start: 1162342
End: 1162722
Strand: Reverse
Name: 222524198
Synonym: Chy400_0919
Alternate gene names: NA
Gene position: 1162722-1162342 (Counterclockwise)
Preceding gene: 222524199
Following gene: 222524197
Centisome position: 22.07
GC content: 59.58
Gene sequence:
>381_bases ATGCCCAAGATCACGATTGGTGATCGTTCGGTTGATGTTGCAGCCGGTACCCGGCTGGTGCTGGCGATTGAGCAGGCCGG GATCGCGATTGGTCACCGTTGTGGCGGTTATGCCCGCTGCACGACCTGCCGGGTGGCGTTTGCCGAAGGTGAGCCTGAAG AGATGACGGCGGCTGAGTACGCCAAACTGAGTGAACGAGGACTGCTTGGACAGTACCGGCTTTCGTGCCAGATTGTTTGT CACCACGATATGGTGATCGCCGACGTACCGATGACCCTCGAAAGTCAGGGCTGGACGGATACCGGTCCTGCGCCTGAGCC AACGGTAACCCCTGATCCGACAACGTTGCCACGGGAAGTTCTTGCCAGTCGGCAAGGGTGA
Upstream 100 bases:
>100_bases AGATCGGCGGCGAACGTCGCCGGTGTTGACACCGTGTTCGTCTCGTGGTAGTTTGAAAGTATACTACTATCGCAACTAAC GCATTGTCGAGGGAGGACGT
Downstream 100 bases:
>100_bases CGGGGTGATTGTTTGGACGTTTTCCACAAGTTGTTTCCCGGCAGTATATTTGCGTAAGGGCGGGTTGACGTACCCGCCCA TTATGATGCCGTCCAGTAGT
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MPKITIGDRSVDVAAGTRLVLAIEQAGIAIGHRCGGYARCTTCRVAFAEGEPEEMTAAEYAKLSERGLLGQYRLSCQIVC HHDMVIADVPMTLESQGWTDTGPAPEPTVTPDPTTLPREVLASRQG
Sequences:
>Translated_126_residues MPKITIGDRSVDVAAGTRLVLAIEQAGIAIGHRCGGYARCTTCRVAFAEGEPEEMTAAEYAKLSERGLLGQYRLSCQIVC HHDMVIADVPMTLESQGWTDTGPAPEPTVTPDPTTLPREVLASRQG >Mature_125_residues PKITIGDRSVDVAAGTRLVLAIEQAGIAIGHRCGGYARCTTCRVAFAEGEPEEMTAAEYAKLSERGLLGQYRLSCQIVCH HDMVIADVPMTLESQGWTDTGPAPEPTVTPDPTTLPREVLASRQG
Specific function: Unknown
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13483; Mature: 13351
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKITIGDRSVDVAAGTRLVLAIEQAGIAIGHRCGGYARCTTCRVAFAEGEPEEMTAAEY CCEEECCCCCEEECCCCEEEEEEECCCEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHH AKLSERGLLGQYRLSCQIVCHHDMVIADVPMTLESQGWTDTGPAPEPTVTPDPTTLPREV HHHHCCCCCEEEEEEEEEEEECCEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCHHH LASRQG HHCCCC >Mature Secondary Structure PKITIGDRSVDVAAGTRLVLAIEQAGIAIGHRCGGYARCTTCRVAFAEGEPEEMTAAEY CEEECCCCCEEECCCCEEEEEEECCCEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHH AKLSERGLLGQYRLSCQIVCHHDMVIADVPMTLESQGWTDTGPAPEPTVTPDPTTLPREV HHHHCCCCCEEEEEEEEEEEECCEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCHHH LASRQG HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA