| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524189
Identifier: 222524189
GI number: 222524189
Start: 1150733
End: 1151296
Strand: Reverse
Name: 222524189
Synonym: Chy400_0910
Alternate gene names: NA
Gene position: 1151296-1150733 (Counterclockwise)
Preceding gene: 222524190
Following gene: 222524183
Centisome position: 21.85
GC content: 65.25
Gene sequence:
>564_bases ATGCCGTGCCCCTACCGGCGTCCAGCGGTACATCGTTCAGGTGCAGCATCAGGGAAACCGGTGGCGGTTATGACCTATAC TGCCAGATGTCCTATTAAGACGCCCCGATCCATCAAAATTCCCCTCGCCCGCGCCGGGTGCGGGCGAGGAGCCGGAGGGG AGGACGTTCCCCCGCTCCCAACGGGGCTATGCATTACCCACATGTCGCGCTGCGTCAGGCCGGACTGCAAGCGCTCCCCG TGGCGCAGGCTTCCAGCTTGTGTGGAGGCATCCTCTCCACCGCCGGCAGGTGCTCCGTGGCCGCTGGTGTGCAGGCGAGA AGCCTGCGCCACGCCCGCGACCGACGCCCTGCGATGTTGCCCAGGGTTTCCGGCGATGATGTACCGTGTTGGTCAAAATG TGAGAGCGCGGATGGTCAAACCAGCCAGATATGCGCTGCACCCCCGTCGTCCTCGTGGCCCGCAAAGCAACCGCTGCCAC CCGCCCGTGATCACGAGCACGGCTGGCGCGGCAGCATGGCTGCCGCACTCCAAACGCTGCGTCACGGGTAATACTGGTCG GTAA
Upstream 100 bases:
>100_bases CTCAACAAAGTGCATTGTTCGGGTGTCATCCTCGTACAGAAGCGTTACCGTGTGTACTCCTGGCGAGTCGCTCGTGGCTT GCCGTCAGTAGGGGCACGGC
Downstream 100 bases:
>100_bases CAGTATCCCCGCTGAAACGTGATTCCACTGTGCGGAGAGCGGCAGGGTAACCGCTGCGACACGCACCGGATCGCAAGTAC GGCTGGCGCGGCAGTATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MPCPYRRPAVHRSGAASGKPVAVMTYTARCPIKTPRSIKIPLARAGCGRGAGGEDVPPLPTGLCITHMSRCVRPDCKRSP WRRLPACVEASSPPPAGAPWPLVCRREACATPATDALRCCPGFPAMMYRVGQNVRARMVKPARYALHPRRPRGPQSNRCH PPVITSTAGAAAWLPHSKRCVTGNTGR
Sequences:
>Translated_187_residues MPCPYRRPAVHRSGAASGKPVAVMTYTARCPIKTPRSIKIPLARAGCGRGAGGEDVPPLPTGLCITHMSRCVRPDCKRSP WRRLPACVEASSPPPAGAPWPLVCRREACATPATDALRCCPGFPAMMYRVGQNVRARMVKPARYALHPRRPRGPQSNRCH PPVITSTAGAAAWLPHSKRCVTGNTGR >Mature_186_residues PCPYRRPAVHRSGAASGKPVAVMTYTARCPIKTPRSIKIPLARAGCGRGAGGEDVPPLPTGLCITHMSRCVRPDCKRSPW RRLPACVEASSPPPAGAPWPLVCRREACATPATDALRCCPGFPAMMYRVGQNVRARMVKPARYALHPRRPRGPQSNRCHP PVITSTAGAAAWLPHSKRCVTGNTGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20120; Mature: 19989
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 7.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCPYRRPAVHRSGAASGKPVAVMTYTARCPIKTPRSIKIPLARAGCGRGAGGEDVPPLP CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCHHCCCCCCCCCCCCCCCCC TGLCITHMSRCVRPDCKRSPWRRLPACVEASSPPPAGAPWPLVCRREACATPATDALRCC CHHHHHHHHHHCCCCCCCCHHHHCHHHHCCCCCCCCCCCCCCEECHHHCCCCCHHHHHHC PGFPAMMYRVGQNVRARMVKPARYALHPRRPRGPQSNRCHPPVITSTAGAAAWLPHSKRC CCCHHHHHHHCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCEE VTGNTGR ECCCCCC >Mature Secondary Structure PCPYRRPAVHRSGAASGKPVAVMTYTARCPIKTPRSIKIPLARAGCGRGAGGEDVPPLP CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCHHCCCCCCCCCCCCCCCCC TGLCITHMSRCVRPDCKRSPWRRLPACVEASSPPPAGAPWPLVCRREACATPATDALRCC CHHHHHHHHHHCCCCCCCCHHHHCHHHHCCCCCCCCCCCCCCEECHHHCCCCCHHHHHHC PGFPAMMYRVGQNVRARMVKPARYALHPRRPRGPQSNRCHPPVITSTAGAAAWLPHSKRC CCCHHHHHHHCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCEE VTGNTGR ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA