| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yigI [C]
Identifier: 222524183
GI number: 222524183
Start: 1139156
End: 1139614
Strand: Reverse
Name: yigI [C]
Synonym: Chy400_0904
Alternate gene names: 222524183
Gene position: 1139614-1139156 (Counterclockwise)
Preceding gene: 222524189
Following gene: 222524176
Centisome position: 21.63
GC content: 62.31
Gene sequence:
>459_bases ATGCACAGCTTCCATCCACAAACCCCCGATTGGGAACCGCGTGTCCGGGCCAGTTTTGCCCGTCAGGGGTTGATGCAGGC GCTTCATGCCGTGATCGAACACCTCAAACCCGGCGAGGTGGCAATCACCATGCCTGCCGATCCGACCTACAGCCAGCAGC ATGGCTACATCCACGGCGGTGCCATTGCCAGCATTCTGGATAGCGCCTGTGGCTATGCGGCGCTGACATTGATGCCGGTC GGGCGTGAAGTGCTGACGGTGGAATTCAAAGTTAACTTTCTCAGCCCGGCCCGTGGTCAGCGCTTTCTGGCGGTGGGGCG TGTGGTGCGTGCCGGCAAAACGGTGACCGTCTGCGCCGGCGAGGCGTTTACTGTTGATGGTGACCGGCGCGTTCCGATTG CCCTGATGCAGGCGACGATGATGGCGGTGCCGGAGATGCCTGAGCGCGCAGCGCACTGA
Upstream 100 bases:
>100_bases CACTCCTTGATAACGCTGTTCACCACGCGCAGGAGATACCGTATAATACAGCCATCGTTTCCCGATGAACCATAGCCGCT GCAATGCGGTCGAGAGAGCC
Downstream 100 bases:
>100_bases GCGCTAGCCCATTGTCTGCTTGCCGGTGACCAGCGGGTAATCTGCCTCTGGCTGACGGCGCAGTTGATCGAGCGGGTGTG GTTGGCGGCGGATGAGGCCG
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Protein; Thioesterase/Thiol Ester Dehydrase-Isomerase; Phenylacetic Acid Degradation Protein Paai; Phenylacetic Acid Degradation Protein; Phenylacetic Acid Degradation Protein PAAI; Thioesterase Superfamily; LOW QUALITY PROTEIN Thioesterase Superfamily Protein; Phenylacetic Acid Degradation-Like Protein; Phenylacetic Acid Degradation Protein PaaD
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MHSFHPQTPDWEPRVRASFARQGLMQALHAVIEHLKPGEVAITMPADPTYSQQHGYIHGGAIASILDSACGYAALTLMPV GREVLTVEFKVNFLSPARGQRFLAVGRVVRAGKTVTVCAGEAFTVDGDRRVPIALMQATMMAVPEMPERAAH
Sequences:
>Translated_152_residues MHSFHPQTPDWEPRVRASFARQGLMQALHAVIEHLKPGEVAITMPADPTYSQQHGYIHGGAIASILDSACGYAALTLMPV GREVLTVEFKVNFLSPARGQRFLAVGRVVRAGKTVTVCAGEAFTVDGDRRVPIALMQATMMAVPEMPERAAH >Mature_152_residues MHSFHPQTPDWEPRVRASFARQGLMQALHAVIEHLKPGEVAITMPADPTYSQQHGYIHGGAIASILDSACGYAALTLMPV GREVLTVEFKVNFLSPARGQRFLAVGRVVRAGKTVTVCAGEAFTVDGDRRVPIALMQATMMAVPEMPERAAH
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16490; Mature: 16490
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSFHPQTPDWEPRVRASFARQGLMQALHAVIEHLKPGEVAITMPADPTYSQQHGYIHGG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEECH AIASILDSACGYAALTLMPVGREVLTVEFKVNFLSPARGQRFLAVGRVVRAGKTVTVCAG HHHHHHHHHCCHHEEHEEECCCEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECC EAFTVDGDRRVPIALMQATMMAVPEMPERAAH CEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MHSFHPQTPDWEPRVRASFARQGLMQALHAVIEHLKPGEVAITMPADPTYSQQHGYIHGG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEECH AIASILDSACGYAALTLMPVGREVLTVEFKVNFLSPARGQRFLAVGRVVRAGKTVTVCAG HHHHHHHHHCCHHEEHEEECCCEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECC EAFTVDGDRRVPIALMQATMMAVPEMPERAAH CEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA