| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524125
Identifier: 222524125
GI number: 222524125
Start: 1057636
End: 1058661
Strand: Reverse
Name: 222524125
Synonym: Chy400_0841
Alternate gene names: NA
Gene position: 1058661-1057636 (Counterclockwise)
Preceding gene: 222524126
Following gene: 222524124
Centisome position: 20.09
GC content: 58.87
Gene sequence:
>1026_bases ATGTCTAATCCGGTTATTCTCTATCTGCCATTGCTCGTCCACAGTGATGTTGCAGTACAGCGACAGGCGACGACTATTCT GCTGACCCATTACGGTAATCGGGCACTGACCTACTTGCGCCGTTTGCTGGACGATCCTGAACTCGCTGACCAGGCCCGGC TGGCGTTGAAAAATATCGGCGAGATCAGCGGTCTGCGGGTTGAGCTGCGCCCATTTCGCGGCGTGTATGTGCGTTGTCTG GGTGATTTTCAGGTCTTCATTGATAGCCGGATGATCAAACCAGACGAATGGGGGCAGAGTGAAGGGGGCAAGGCCGGCGG TCGTAAAGTGCAGGGTATGTTTGCCTACCTTGTGCATTGTGGGGTTGAAGGGGCGACGCGGAGCGAGATTGCCGAGGCGG TCTGGGGTGGTACGGCCTCGGCCAGCAGTTTTGCCAGGACGCTTACGGCATTACGGCAGGTGCTTCAGCAGTGCGGTGGC GAGGAGCTGGCTGCCAGTTTGCTCTACACTGACCGGCAGCGTTGTGCGCTCAACCCTGATCTGTATCAAAGTGATGCCGA TTTGCTTGAGCGCACGTTCGATCTGGCCACCAGGACGGCCAATACCCAGGGTGTAGAGGCAGCCCTTTCCTTCTATCAAT ACGTGCTTGATCTGTACGATGGGCCGTATATGGAAGGGGTTGTGGGGGCGCAGGAGTGGGCAGCCGAACGTGGGGCACGG TTGTTGAGCCACGTGGTGCTGGCAGGCGAACGCCTGGCCTCTACGGCTTTGCACAATGGTCAGGTGGAGCAGTGTTTGCA GTACTGCCAGCGTGTGTTGGCCCACGAGCCGCGTGCGGTAGGTGTCCTGAGCCTGTTGTTGCGGGCCGGTCACCGACTTG GGTTACCGGCAGAAATACAGCGTGCCTACCAGCGCTACCTGTCAGCGACCGGGATCAATCCGCGTCGCAAGCGCGATGAT CCGGTGGTGAAACTGTACCGGGAACTGTCCGAGTCGGTTGAGGATCGCGGTAGCAATGGCGGGTAG
Upstream 100 bases:
>100_bases TTGGTTGAGTTTGATGAGCACGGCGAATTGCGGATTGATCCCTCGGTCAACATTGTGCGGCGCTTGCCGCCGGTAGAGGA CGAAGGGAGTGAGTAGTGCG
Downstream 100 bases:
>100_bases TATCTTAACCCAAGTTGCTACCTTACGTCACCACAGCGGTGCGGGTCGTTGAGCGCGACGGGGGGAGGGGTGGAACACGG ATGGACGCGGGTGAGGCGGA
Product: response regulator receiver and SARP domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSNPVILYLPLLVHSDVAVQRQATTILLTHYGNRALTYLRRLLDDPELADQARLALKNIGEISGLRVELRPFRGVYVRCL GDFQVFIDSRMIKPDEWGQSEGGKAGGRKVQGMFAYLVHCGVEGATRSEIAEAVWGGTASASSFARTLTALRQVLQQCGG EELAASLLYTDRQRCALNPDLYQSDADLLERTFDLATRTANTQGVEAALSFYQYVLDLYDGPYMEGVVGAQEWAAERGAR LLSHVVLAGERLASTALHNGQVEQCLQYCQRVLAHEPRAVGVLSLLLRAGHRLGLPAEIQRAYQRYLSATGINPRRKRDD PVVKLYRELSESVEDRGSNGG
Sequences:
>Translated_341_residues MSNPVILYLPLLVHSDVAVQRQATTILLTHYGNRALTYLRRLLDDPELADQARLALKNIGEISGLRVELRPFRGVYVRCL GDFQVFIDSRMIKPDEWGQSEGGKAGGRKVQGMFAYLVHCGVEGATRSEIAEAVWGGTASASSFARTLTALRQVLQQCGG EELAASLLYTDRQRCALNPDLYQSDADLLERTFDLATRTANTQGVEAALSFYQYVLDLYDGPYMEGVVGAQEWAAERGAR LLSHVVLAGERLASTALHNGQVEQCLQYCQRVLAHEPRAVGVLSLLLRAGHRLGLPAEIQRAYQRYLSATGINPRRKRDD PVVKLYRELSESVEDRGSNGG >Mature_340_residues SNPVILYLPLLVHSDVAVQRQATTILLTHYGNRALTYLRRLLDDPELADQARLALKNIGEISGLRVELRPFRGVYVRCLG DFQVFIDSRMIKPDEWGQSEGGKAGGRKVQGMFAYLVHCGVEGATRSEIAEAVWGGTASASSFARTLTALRQVLQQCGGE ELAASLLYTDRQRCALNPDLYQSDADLLERTFDLATRTANTQGVEAALSFYQYVLDLYDGPYMEGVVGAQEWAAERGARL LSHVVLAGERLASTALHNGQVEQCLQYCQRVLAHEPRAVGVLSLLLRAGHRLGLPAEIQRAYQRYLSATGINPRRKRDDP VVKLYRELSESVEDRGSNGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37679; Mature: 37548
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPVILYLPLLVHSDVAVQRQATTILLTHYGNRALTYLRRLLDDPELADQARLALKNIG CCCCEEEEEHHHHHCCHHHHHHHHEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHH EISGLRVELRPFRGVYVRCLGDFQVFIDSRMIKPDEWGQSEGGKAGGRKVQGMFAYLVHC HHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GVEGATRSEIAEAVWGGTASASSFARTLTALRQVLQQCGGEELAASLLYTDRQRCALNPD CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCH LYQSDADLLERTFDLATRTANTQGVEAALSFYQYVLDLYDGPYMEGVVGAQEWAAERGAR HHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LLSHVVLAGERLASTALHNGQVEQCLQYCQRVLAHEPRAVGVLSLLLRAGHRLGLPAEIQ HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHH RAYQRYLSATGINPRRKRDDPVVKLYRELSESVEDRGSNGG HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SNPVILYLPLLVHSDVAVQRQATTILLTHYGNRALTYLRRLLDDPELADQARLALKNIG CCCEEEEEHHHHHCCHHHHHHHHEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHH EISGLRVELRPFRGVYVRCLGDFQVFIDSRMIKPDEWGQSEGGKAGGRKVQGMFAYLVHC HHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GVEGATRSEIAEAVWGGTASASSFARTLTALRQVLQQCGGEELAASLLYTDRQRCALNPD CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCH LYQSDADLLERTFDLATRTANTQGVEAALSFYQYVLDLYDGPYMEGVVGAQEWAAERGAR HHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LLSHVVLAGERLASTALHNGQVEQCLQYCQRVLAHEPRAVGVLSLLLRAGHRLGLPAEIQ HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHH RAYQRYLSATGINPRRKRDDPVVKLYRELSESVEDRGSNGG HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA