| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524123
Identifier: 222524123
GI number: 222524123
Start: 1054069
End: 1055259
Strand: Reverse
Name: 222524123
Synonym: Chy400_0839
Alternate gene names: NA
Gene position: 1055259-1054069 (Counterclockwise)
Preceding gene: 222524124
Following gene: 222524122
Centisome position: 20.03
GC content: 58.77
Gene sequence:
>1191_bases ATGAGCGGAAATATTCTGACCCACATTGTCAGTTTTGGCTATCTCTTGCGAGAGATGGGAATCGCCGTCAGCCCCGGTCA AATTGTCGAACTGATCGAGGCGATTGAGCACGTTGGTCTGCTGCGCCGCGAGGACTTGCGGGCGACGATGCGCTGTATGC TGGTGTTGCGCCGCGAAGACCTGCCGTTGTTTGATGTGGCCTTTGAGTTTTTCTGGAAGAAGGCGCTCGGTATTGACCTG GAACGCGAGATGATGCAGATGCTGCTCCCGCAGGTTAAAATTCCGCGCCGTCAGTTGCGTCTACCGCGCCGCCAGCCTAC TGCCGATGATGCCGATGCCGCTGAAGGTCAGGAACGGGAAGAGATTGACATTCAACTTACCTTTAGCCGTGACGAGGCAT TGCGCACCAAGGATTTTGCCCAGTGTACCTGGGAAGAGGTCCAGGCGTGCAAGGAGCTGATCCGGCGGATGGAATGGCGG ATTCAACCGCGGCGTACCCGACGCAGGCGTCCTGATCGGGCCGGTCGGCTGTTGGATATGCGGCGTACCCTGCGGCGGAG CTGGCGTTTCGGCGGTGAACCGGTTGAGTTGTCGTGGCGTCATATCCGTACCGAGCCGCGTCCGCTGGTGCTCATCTGCG ATATTTCGGGTAGTATGGAGCGCTATTCGCGCATTCTGCTCCAGTTTGCCCATGCTATCTCGGCGGGGTTGGGTGATGTA GAGACCTTTGTCTTCGGTACGCGCCTGACCCGGATTACCCGGCAGTTGCGCCACAAAGATATTGATGATGCGATTGATGC GGTGAGCAAGCATGTGGTGGATTGGAGCGGCGGTACTCGCATTGGTGAGGCGATCAAAGAGTTTAATTTTCGCTGGGGGC GGCGCGTATTGGGACGGAGTCCGGTGGTGTTGTTGATCAGCGATGGCTGGGATCGCGGTGATCCGGAATTGCTGGCCCGC GAAATGGATCGGCTGCAACGTTCGTGTCACCGCCTGATCTGGTTGAATCCGCTGCTCGGCACCCCTGGCTACGAGCCGTT AACGGTGGGGATGCAGGCTGCCTTGCCGTTTGTCGATGATTTTCTGCCGGTACACAATCTGGTCAGCTTAGAGCAGCTCG GTGCGAAACTGGCTGCCCTCGGCCCGCAACGTCCGGCTCGCCGCCAGCGCATGACGATCACGCGAGGCTGA
Upstream 100 bases:
>100_bases GGCAACAGGCGGCGAATGGCTGTCAACCTGTACACATACCTGCGGTGATGGTAGAATGTAGACTGATGATAACACTACCT GTGCCAACCTGAAACCTTCC
Downstream 100 bases:
>100_bases TTATGAGTAATCCTGTACAGTTGAAGGCAGAAGCCGATGCCTTGATTGCACGCGGCAAAGCCCTTATCGCCACCGATTTA CCGCAGGCTACCGATCTGCT
Product: VWA containing CoxE family protein
Products: NA
Alternate protein names: VWA Containing CoxE-Like; VWA Domain Containing CoxE-Like Protein; VWA Containing CoxE-Like Protein; Carbon Monoxide Dehydrogenase E Protein; VWA Domain CoxE-Like Family Protein; Carbon Monoxide Dehydrogenase CoxE Subunit; Von Willebrand Factor Type A Domain-Containing Protein; Vwa Domain Coxe-Like Protein; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; Carbon Monoxide Dehydrogenase Accessory Protein; CoxE Protein; VWA Domain-Containing Protein; VWA Domain-Containing CoxE-Like Family Protein; VWA Domain Protein
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSGNILTHIVSFGYLLREMGIAVSPGQIVELIEAIEHVGLLRREDLRATMRCMLVLRREDLPLFDVAFEFFWKKALGIDL EREMMQMLLPQVKIPRRQLRLPRRQPTADDADAAEGQEREEIDIQLTFSRDEALRTKDFAQCTWEEVQACKELIRRMEWR IQPRRTRRRRPDRAGRLLDMRRTLRRSWRFGGEPVELSWRHIRTEPRPLVLICDISGSMERYSRILLQFAHAISAGLGDV ETFVFGTRLTRITRQLRHKDIDDAIDAVSKHVVDWSGGTRIGEAIKEFNFRWGRRVLGRSPVVLLISDGWDRGDPELLAR EMDRLQRSCHRLIWLNPLLGTPGYEPLTVGMQAALPFVDDFLPVHNLVSLEQLGAKLAALGPQRPARRQRMTITRG
Sequences:
>Translated_396_residues MSGNILTHIVSFGYLLREMGIAVSPGQIVELIEAIEHVGLLRREDLRATMRCMLVLRREDLPLFDVAFEFFWKKALGIDL EREMMQMLLPQVKIPRRQLRLPRRQPTADDADAAEGQEREEIDIQLTFSRDEALRTKDFAQCTWEEVQACKELIRRMEWR IQPRRTRRRRPDRAGRLLDMRRTLRRSWRFGGEPVELSWRHIRTEPRPLVLICDISGSMERYSRILLQFAHAISAGLGDV ETFVFGTRLTRITRQLRHKDIDDAIDAVSKHVVDWSGGTRIGEAIKEFNFRWGRRVLGRSPVVLLISDGWDRGDPELLAR EMDRLQRSCHRLIWLNPLLGTPGYEPLTVGMQAALPFVDDFLPVHNLVSLEQLGAKLAALGPQRPARRQRMTITRG >Mature_395_residues SGNILTHIVSFGYLLREMGIAVSPGQIVELIEAIEHVGLLRREDLRATMRCMLVLRREDLPLFDVAFEFFWKKALGIDLE REMMQMLLPQVKIPRRQLRLPRRQPTADDADAAEGQEREEIDIQLTFSRDEALRTKDFAQCTWEEVQACKELIRRMEWRI QPRRTRRRRPDRAGRLLDMRRTLRRSWRFGGEPVELSWRHIRTEPRPLVLICDISGSMERYSRILLQFAHAISAGLGDVE TFVFGTRLTRITRQLRHKDIDDAIDAVSKHVVDWSGGTRIGEAIKEFNFRWGRRVLGRSPVVLLISDGWDRGDPELLARE MDRLQRSCHRLIWLNPLLGTPGYEPLTVGMQAALPFVDDFLPVHNLVSLEQLGAKLAALGPQRPARRQRMTITRG
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45965; Mature: 45834
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGNILTHIVSFGYLLREMGIAVSPGQIVELIEAIEHVGLLRREDLRATMRCMLVLRRED CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPLFDVAFEFFWKKALGIDLEREMMQMLLPQVKIPRRQLRLPRRQPTADDADAAEGQERE CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC EIDIQLTFSRDEALRTKDFAQCTWEEVQACKELIRRMEWRIQPRRTRRRRPDRAGRLLDM CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHH RRTLRRSWRFGGEPVELSWRHIRTEPRPLVLICDISGSMERYSRILLQFAHAISAGLGDV HHHHHHHHCCCCCCEEECHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHH ETFVFGTRLTRITRQLRHKDIDDAIDAVSKHVVDWSGGTRIGEAIKEFNFRWGRRVLGRS HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC PVVLLISDGWDRGDPELLAREMDRLQRSCHRLIWLNPLLGTPGYEPLTVGMQAALPFVDD CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHH FLPVHNLVSLEQLGAKLAALGPQRPARRQRMTITRG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC >Mature Secondary Structure SGNILTHIVSFGYLLREMGIAVSPGQIVELIEAIEHVGLLRREDLRATMRCMLVLRRED CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPLFDVAFEFFWKKALGIDLEREMMQMLLPQVKIPRRQLRLPRRQPTADDADAAEGQERE CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC EIDIQLTFSRDEALRTKDFAQCTWEEVQACKELIRRMEWRIQPRRTRRRRPDRAGRLLDM CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHH RRTLRRSWRFGGEPVELSWRHIRTEPRPLVLICDISGSMERYSRILLQFAHAISAGLGDV HHHHHHHHCCCCCCEEECHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHH ETFVFGTRLTRITRQLRHKDIDDAIDAVSKHVVDWSGGTRIGEAIKEFNFRWGRRVLGRS HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC PVVLLISDGWDRGDPELLAREMDRLQRSCHRLIWLNPLLGTPGYEPLTVGMQAALPFVDD CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHH FLPVHNLVSLEQLGAKLAALGPQRPARRQRMTITRG HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA