| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523969
Identifier: 222523969
GI number: 222523969
Start: 848838
End: 850292
Strand: Reverse
Name: 222523969
Synonym: Chy400_0684
Alternate gene names: NA
Gene position: 850292-848838 (Counterclockwise)
Preceding gene: 222523973
Following gene: 222523967
Centisome position: 16.14
GC content: 55.67
Gene sequence:
>1455_bases ATGCGCACGTTTTTTGCCGGCCGCGACCTGGGACCACTGGTCATTATTCTCATGTTTCTTATCCTCTTGCCATTTAGCCT GCCGCGCATTGCGCTGAGCGATGAGGTGCAGTATTACGCCTATCTGCGTTCGTTCTACTTTGATCGTGATCTCAATTTTT ACAATGAGTATCAGCACTTTGCCGAGATTGGCTTGAAAAACGATGATCCGGCAGTATCTAATGCGCTGCTACGTTCTGAT GATGCGAATCCCAATCCGGTAACCGGTAAGCTACGCAACGTGGCGCCGATTGGCTCGGCGTTGCTGTGGGCACCGGGTTT TGTGGTTGCCGATCTGTGGGTGCAGATAGCAAATGCGGGCGGGGCGGCAATTCCGCGTGATGGCTATAGTCAGCCGTACA TCGTTGCCGTTTGTCTGATGTCGGCGCTGTACAGCTTGCTTGGGCTGTTATTGACCTATCGTCTGGCCCGCATCTACACC GGCCAGTTGCCGGCCCTGATCGCGACCATCGCCGTGTTTTTGAGTACACCACTGGTCTTTTACACCTATCTTGCGATGGC CTGGTCGCATGCCAATGGCTTTTTTCTCTTTACCCTCTTCCTTACGATCTGGATGCGGGGTCGCGAAGGCAATCTTGGCC TCAGCGATGGCCAACGCCACTGGAGTGTCTGGCTGGCACTGGGTGTCGTGGCCGGTTTGATGGTGATGACCCGCGAGCAG TTAGGTTTGCTGCTCCTCATCCCCGCCGTTGAGGCACTGGCGGCCTACATTGGTGCCCTGCGCCGTCGGCAATGGTCGCT GCTGCGCAGGCTGTTTGCCGGTCATCTCCTGTTTCTTGCCGTCTTTGTTGTATCCATCACACCGCAACTGGCGACCTACT GGGTGCTCAATGGGCGGATTGGCCCCTCTTCAACCGTGGGTGGTAAACTGGCGTTCGTGCAATTGGGACCATTACCGATC CTGGTGAGTCCCCGCTTTTGGGATACGCTGATCCATCCGGCTCACGGTGCGCTGCTCTGGAGTCCAATCCTGTTTCTGGC CTTGGCCGGTCTCGCCTGGCTATTTCGCCGCGATGGCCCGTTGGCTTTACTGCTACTGATCGGTTTTCTCGGTCAGGTAT ATATCAATGGTGCATTCGGCACCACCTGGCACCTGAGCGGCTCATTTGGTTTTCGGCGCCTGATTGAATGCACGCCGATC TTCGTCTTGGGGTTATCGGCACTGCTGGCCTGGTTACAGCCACGGCTGGGGTGGAAGCCACTGGTTGTTGGCGCTGCGCT GTTTGTGGCCTGGAATGTAGGTCTGATTGCGCAGTGGACGTTCGTTAGAACCGAGTTGCGACGTGGTTTGATTTGGGATG ATATGCTCTGGTATCAGCTTCAGGTACCGTTGCAGATACTAAGTCGTCTGGGCGATATTTTGTTCAACCGCTGCCGTCTG ACGACCAATTGCTGA
Upstream 100 bases:
>100_bases GAGCGTGTCTGACGATTCGTCGTACAATAGCAGCGGGCAGCCGTGGTGCTGTCGGAGGAAGATATATCAAAAGAATCTAC AATCAGGAGTAGCGGGACGT
Downstream 100 bases:
>100_bases AGCTGGTAGTGTCATCGGTCTGGGTGAAGGGATTGGGCGCGGCAGCATCGTTGCTGCCGGTGTCCGACAGATCAGGGTCG GGCTGCCGGAAATATGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MRTFFAGRDLGPLVIILMFLILLPFSLPRIALSDEVQYYAYLRSFYFDRDLNFYNEYQHFAEIGLKNDDPAVSNALLRSD DANPNPVTGKLRNVAPIGSALLWAPGFVVADLWVQIANAGGAAIPRDGYSQPYIVAVCLMSALYSLLGLLLTYRLARIYT GQLPALIATIAVFLSTPLVFYTYLAMAWSHANGFFLFTLFLTIWMRGREGNLGLSDGQRHWSVWLALGVVAGLMVMTREQ LGLLLLIPAVEALAAYIGALRRRQWSLLRRLFAGHLLFLAVFVVSITPQLATYWVLNGRIGPSSTVGGKLAFVQLGPLPI LVSPRFWDTLIHPAHGALLWSPILFLALAGLAWLFRRDGPLALLLLIGFLGQVYINGAFGTTWHLSGSFGFRRLIECTPI FVLGLSALLAWLQPRLGWKPLVVGAALFVAWNVGLIAQWTFVRTELRRGLIWDDMLWYQLQVPLQILSRLGDILFNRCRL TTNC
Sequences:
>Translated_484_residues MRTFFAGRDLGPLVIILMFLILLPFSLPRIALSDEVQYYAYLRSFYFDRDLNFYNEYQHFAEIGLKNDDPAVSNALLRSD DANPNPVTGKLRNVAPIGSALLWAPGFVVADLWVQIANAGGAAIPRDGYSQPYIVAVCLMSALYSLLGLLLTYRLARIYT GQLPALIATIAVFLSTPLVFYTYLAMAWSHANGFFLFTLFLTIWMRGREGNLGLSDGQRHWSVWLALGVVAGLMVMTREQ LGLLLLIPAVEALAAYIGALRRRQWSLLRRLFAGHLLFLAVFVVSITPQLATYWVLNGRIGPSSTVGGKLAFVQLGPLPI LVSPRFWDTLIHPAHGALLWSPILFLALAGLAWLFRRDGPLALLLLIGFLGQVYINGAFGTTWHLSGSFGFRRLIECTPI FVLGLSALLAWLQPRLGWKPLVVGAALFVAWNVGLIAQWTFVRTELRRGLIWDDMLWYQLQVPLQILSRLGDILFNRCRL TTNC >Mature_484_residues MRTFFAGRDLGPLVIILMFLILLPFSLPRIALSDEVQYYAYLRSFYFDRDLNFYNEYQHFAEIGLKNDDPAVSNALLRSD DANPNPVTGKLRNVAPIGSALLWAPGFVVADLWVQIANAGGAAIPRDGYSQPYIVAVCLMSALYSLLGLLLTYRLARIYT GQLPALIATIAVFLSTPLVFYTYLAMAWSHANGFFLFTLFLTIWMRGREGNLGLSDGQRHWSVWLALGVVAGLMVMTREQ LGLLLLIPAVEALAAYIGALRRRQWSLLRRLFAGHLLFLAVFVVSITPQLATYWVLNGRIGPSSTVGGKLAFVQLGPLPI LVSPRFWDTLIHPAHGALLWSPILFLALAGLAWLFRRDGPLALLLLIGFLGQVYINGAFGTTWHLSGSFGFRRLIECTPI FVLGLSALLAWLQPRLGWKPLVVGAALFVAWNVGLIAQWTFVRTELRRGLIWDDMLWYQLQVPLQILSRLGDILFNRCRL TTNC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54072; Mature: 54072
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFFAGRDLGPLVIILMFLILLPFSLPRIALSDEVQYYAYLRSFYFDRDLNFYNEYQHF CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AEIGLKNDDPAVSNALLRSDDANPNPVTGKLRNVAPIGSALLWAPGFVVADLWVQIANAG HHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHCCCHHCHHHHHCCHHHHHHHHHHHHCCC GAAIPRDGYSQPYIVAVCLMSALYSLLGLLLTYRLARIYTGQLPALIATIAVFLSTPLVF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHH YTYLAMAWSHANGFFLFTLFLTIWMRGREGNLGLSDGQRHWSVWLALGVVAGLMVMTREQ HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGLLLLIPAVEALAAYIGALRRRQWSLLRRLFAGHLLFLAVFVVSITPQLATYWVLNGRI CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEEEECCC GPSSTVGGKLAFVQLGPLPILVSPRFWDTLIHPAHGALLWSPILFLALAGLAWLFRRDGP CCCCCCCCEEEEEEECCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC LALLLLIGFLGQVYINGAFGTTWHLSGSFGFRRLIECTPIFVLGLSALLAWLQPRLGWKP HHHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH LVVGAALFVAWNVGLIAQWTFVRTELRRGLIWDDMLWYQLQVPLQILSRLGDILFNRCRL HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TTNC CCCC >Mature Secondary Structure MRTFFAGRDLGPLVIILMFLILLPFSLPRIALSDEVQYYAYLRSFYFDRDLNFYNEYQHF CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AEIGLKNDDPAVSNALLRSDDANPNPVTGKLRNVAPIGSALLWAPGFVVADLWVQIANAG HHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHCCCHHCHHHHHCCHHHHHHHHHHHHCCC GAAIPRDGYSQPYIVAVCLMSALYSLLGLLLTYRLARIYTGQLPALIATIAVFLSTPLVF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHH YTYLAMAWSHANGFFLFTLFLTIWMRGREGNLGLSDGQRHWSVWLALGVVAGLMVMTREQ HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGLLLLIPAVEALAAYIGALRRRQWSLLRRLFAGHLLFLAVFVVSITPQLATYWVLNGRI CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEEEECCC GPSSTVGGKLAFVQLGPLPILVSPRFWDTLIHPAHGALLWSPILFLALAGLAWLFRRDGP CCCCCCCCEEEEEEECCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC LALLLLIGFLGQVYINGAFGTTWHLSGSFGFRRLIECTPIFVLGLSALLAWLQPRLGWKP HHHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH LVVGAALFVAWNVGLIAQWTFVRTELRRGLIWDDMLWYQLQVPLQILSRLGDILFNRCRL HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TTNC CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA