| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is ubiB [C]
Identifier: 222523966
GI number: 222523966
Start: 845762
End: 847435
Strand: Reverse
Name: ubiB [C]
Synonym: Chy400_0681
Alternate gene names: 222523966
Gene position: 847435-845762 (Counterclockwise)
Preceding gene: 222523967
Following gene: 222523963
Centisome position: 16.08
GC content: 58.12
Gene sequence:
>1674_bases ATGTGGCCACTTGTTCGCCAGGCCCGTCATCTTGGACGCTACCGCGAAATTGCTCAGGTGCTGGTGCATCACGGTTTTGG CTATCTGGTCGATCAGCTTGGGTTGAGTGGGCTGTTGTCGTTGCCCCGCCGGGTCATTTTGCGGGCACCGGCACCGCCAC CACTCGGTAGTGCAGCCCGGCTGCGCGAGGCGCTGATCGAGCTGGGGCCGACGTTCGTCAAGCTGGGCCAGGCTTTGAGC ACTCGTCCCGATCTTCTTCCAGCCGATGTGGTTGCCGAGCTGAGTAAGTTGCAGGATACGGTGCCGCCGTTTCCCGGCGA TCAGGCGGTGGCCCTGATCGAAGCAACCTTTAATCGGCCACTTGATCAACTGTTTATTGCCTTTGATCGTCAGCCCTTTG CCGCTGCCTCGCTTGGTCAGGTACACGCTGCCGTTCTGCCTGATGGAACGCAGGTGGTGGTCAAGGTGCAACGCCCGGAT ATTGCCTCGCGCATTCAGACCGATCTGGCAATCCTGGCCGATCTGGCAACACTGGCACAGGAACGTCTGGCCTTCGCCGC CCAATACAACCTGAGCGAGATTGTGTGGGAGTTTAGCGCCATGTTGCGCGCCGAGCTTGATTACGTCCGTGAAGGGCGCA ATGCCGAGCGCTTCCGCCAGATGTTTTGCACAAATCCGCATATCTATATTCCGCGGGTGTATTGGGAATATACCGATAGC CGTATCTTGACCACGGAGCGGATTGTTGGGGTTAAGCTAAACGATATGGCAGGATTGCGTGCTGCCGGGGTTGACATGTC GCGCCTGGCGCGGGCAAGCCTTGATATTACGCTGGAAGAGATTTTTACCCACGGTTTCTTTCACAGCGATCCCCATCCGG GCAACTTCTTCGTACTCGATGGTGACGTATTGGGAGTAGTTGATTTCGGGCAGGTAGGCACGCTTGATCACGCCACGATG CAGGGCTTGCTCTGGCTGATGGGTGCGCTGGTCAATCACGATAGTCAGGGGCTGCTCAGATCACTCGAACGCCTGGAAGT CATACCCCGGCGAGCGGCAAATCTGGCGTTGCGTCGCGATCTGGAACGGTTCGTCGAGGGATTTGTGGATCGGCCCCTCG GCCTGATTTCGGCCCGCGAGACATTCGATGGCCTCACCACACTCCTACGGCGGCACCGTTTAACCATTCCCGGCCCTCTG GCCACGTTGCTCAAGACCATTGTGATGATGGAGGGGTTGGGGATGCAACTTGATCCGAACCTGAATGTCTTCGCTGCCGC CCGCCCGTACATTCAGCGCGCCCTTCGTGAGCAGATGAATCCAACCGCCCTCGGCGCTCAGGCGCTGGCAGGTGGTCGTG AATTGGGTGAACTGGCGTTTGATCTACCCATCCAGATCAGTCAAACTCTCCAACACCTCAACGATGGCGAGTTGCGCATT CAAACCCGCGAGCTTGAATTGCGCCGACTGGCCGCTGCGTTGATCGGTGCTGCCAATCGGCTGGCACTGGCGCTGGTTGT TGCAGCGTTTATCGTAGGGGTAGCAGCATTGGTCATTGCAATGCGTGCTTTGGACTGGTATGGCGTGTTGCCGTGGACAC TGTTGTTCATCGGGATTGGTGGCGTGATCACCGGCGGAATTATGTTGACGCTGGCGTTGCTACGTCGCGAATGA
Upstream 100 bases:
>100_bases GAAGCCGGTTTGCTCACCTCTTGGTCTCGAAACCGGGGTATACTACACTTACTGCTGCGTTGTTCGCACGAGTTTCTGCC TGTAGATAGCTGGTGTTCTC
Downstream 100 bases:
>100_bases GGTGAGTGACCGGTAGTAGTATCCGGTCACTCTCCGGCAAGTAAGCGGTTAACGGTGGCAACAATCAATCGTCGCTCGAC CGCCTTTATCCGTTCGTGCA
Product: ABC-1 domain-containing protein
Products: 2-octaprenyl-6-hydroxyphenol [C]
Alternate protein names: NA
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MWPLVRQARHLGRYREIAQVLVHHGFGYLVDQLGLSGLLSLPRRVILRAPAPPPLGSAARLREALIELGPTFVKLGQALS TRPDLLPADVVAELSKLQDTVPPFPGDQAVALIEATFNRPLDQLFIAFDRQPFAAASLGQVHAAVLPDGTQVVVKVQRPD IASRIQTDLAILADLATLAQERLAFAAQYNLSEIVWEFSAMLRAELDYVREGRNAERFRQMFCTNPHIYIPRVYWEYTDS RILTTERIVGVKLNDMAGLRAAGVDMSRLARASLDITLEEIFTHGFFHSDPHPGNFFVLDGDVLGVVDFGQVGTLDHATM QGLLWLMGALVNHDSQGLLRSLERLEVIPRRAANLALRRDLERFVEGFVDRPLGLISARETFDGLTTLLRRHRLTIPGPL ATLLKTIVMMEGLGMQLDPNLNVFAAARPYIQRALREQMNPTALGAQALAGGRELGELAFDLPIQISQTLQHLNDGELRI QTRELELRRLAAALIGAANRLALALVVAAFIVGVAALVIAMRALDWYGVLPWTLLFIGIGGVITGGIMLTLALLRRE
Sequences:
>Translated_557_residues MWPLVRQARHLGRYREIAQVLVHHGFGYLVDQLGLSGLLSLPRRVILRAPAPPPLGSAARLREALIELGPTFVKLGQALS TRPDLLPADVVAELSKLQDTVPPFPGDQAVALIEATFNRPLDQLFIAFDRQPFAAASLGQVHAAVLPDGTQVVVKVQRPD IASRIQTDLAILADLATLAQERLAFAAQYNLSEIVWEFSAMLRAELDYVREGRNAERFRQMFCTNPHIYIPRVYWEYTDS RILTTERIVGVKLNDMAGLRAAGVDMSRLARASLDITLEEIFTHGFFHSDPHPGNFFVLDGDVLGVVDFGQVGTLDHATM QGLLWLMGALVNHDSQGLLRSLERLEVIPRRAANLALRRDLERFVEGFVDRPLGLISARETFDGLTTLLRRHRLTIPGPL ATLLKTIVMMEGLGMQLDPNLNVFAAARPYIQRALREQMNPTALGAQALAGGRELGELAFDLPIQISQTLQHLNDGELRI QTRELELRRLAAALIGAANRLALALVVAAFIVGVAALVIAMRALDWYGVLPWTLLFIGIGGVITGGIMLTLALLRRE >Mature_557_residues MWPLVRQARHLGRYREIAQVLVHHGFGYLVDQLGLSGLLSLPRRVILRAPAPPPLGSAARLREALIELGPTFVKLGQALS TRPDLLPADVVAELSKLQDTVPPFPGDQAVALIEATFNRPLDQLFIAFDRQPFAAASLGQVHAAVLPDGTQVVVKVQRPD IASRIQTDLAILADLATLAQERLAFAAQYNLSEIVWEFSAMLRAELDYVREGRNAERFRQMFCTNPHIYIPRVYWEYTDS RILTTERIVGVKLNDMAGLRAAGVDMSRLARASLDITLEEIFTHGFFHSDPHPGNFFVLDGDVLGVVDFGQVGTLDHATM QGLLWLMGALVNHDSQGLLRSLERLEVIPRRAANLALRRDLERFVEGFVDRPLGLISARETFDGLTTLLRRHRLTIPGPL ATLLKTIVMMEGLGMQLDPNLNVFAAARPYIQRALREQMNPTALGAQALAGGRELGELAFDLPIQISQTLQHLNDGELRI QTRELELRRLAAALIGAANRLALALVVAAFIVGVAALVIAMRALDWYGVLPWTLLFIGIGGVITGGIMLTLALLRRE
Specific function: Required, Probably Indirectly, For The Hydroxylation Of 2-Octaprenylphenol To 2-Octaprenyl-6-Hydroxy-Phenol, The Fourth Step In Ubiquinone Biosynthesis. Specific For Aerobically Grown Log-Phase Cells. [C]
COG id: COG0661
COG function: function code R; Predicted unusual protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the protein kinase superfamily. ADCK protein kinase family [H]
Homologues:
Organism=Homo sapiens, GI41393593, Length=374, Percent_Identity=30.7486631016043, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI40254938, Length=291, Percent_Identity=32.6460481099656, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI217035081, Length=251, Percent_Identity=31.4741035856574, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI27363457, Length=258, Percent_Identity=30.2325581395349, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI217416386, Length=209, Percent_Identity=33.4928229665072, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI34147522, Length=443, Percent_Identity=25.5079006772009, Blast_Score=95, Evalue=2e-19, Organism=Escherichia coli, GI2367309, Length=434, Percent_Identity=33.6405529953917, Blast_Score=210, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17559152, Length=244, Percent_Identity=31.9672131147541, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI32565180, Length=243, Percent_Identity=31.2757201646091, Blast_Score=109, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6321319, Length=241, Percent_Identity=31.1203319502075, Blast_Score=110, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6325148, Length=437, Percent_Identity=23.3409610983982, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6323282, Length=241, Percent_Identity=28.6307053941909, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI24662575, Length=362, Percent_Identity=30.3867403314917, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI22024280, Length=227, Percent_Identity=32.5991189427313, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI18859849, Length=309, Percent_Identity=28.4789644012945, Blast_Score=115, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004147 - InterPro: IPR011009 - InterPro: IPR000719 [H]
Pfam domain/function: PF03109 ABC1 [H]
EC number: NA
Molecular weight: Translated: 61454; Mature: 61454
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWPLVRQARHLGRYREIAQVLVHHGFGYLVDQLGLSGLLSLPRRVILRAPAPPPLGSAAR CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHH LREALIELGPTFVKLGQALSTRPDLLPADVVAELSKLQDTVPPFPGDQAVALIEATFNRP HHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC LDQLFIAFDRQPFAAASLGQVHAAVLPDGTQVVVKVQRPDIASRIQTDLAILADLATLAQ HHHHHHHHCCCCCHHHHHHHHHHEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH ERLAFAAQYNLSEIVWEFSAMLRAELDYVREGRNAERFRQMFCTNPHIYIPRVYWEYTDS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECEEEEEECCC RILTTERIVGVKLNDMAGLRAAGVDMSRLARASLDITLEEIFTHGFFHSDPHPGNFFVLD EEEEHHHEEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC GDVLGVVDFGQVGTLDHATMQGLLWLMGALVNHDSQGLLRSLERLEVIPRRAANLALRRD CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LERFVEGFVDRPLGLISARETFDGLTTLLRRHRLTIPGPLATLLKTIVMMEGLGMQLDPN HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCC LNVFAAARPYIQRALREQMNPTALGAQALAGGRELGELAFDLPIQISQTLQHLNDGELRI CCEEECCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCEEE QTRELELRRLAAALIGAANRLALALVVAAFIVGVAALVIAMRALDWYGVLPWTLLFIGIG EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVITGGIMLTLALLRRE HHHHHHHHHHHHHHHCC >Mature Secondary Structure MWPLVRQARHLGRYREIAQVLVHHGFGYLVDQLGLSGLLSLPRRVILRAPAPPPLGSAAR CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHH LREALIELGPTFVKLGQALSTRPDLLPADVVAELSKLQDTVPPFPGDQAVALIEATFNRP HHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC LDQLFIAFDRQPFAAASLGQVHAAVLPDGTQVVVKVQRPDIASRIQTDLAILADLATLAQ HHHHHHHHCCCCCHHHHHHHHHHEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH ERLAFAAQYNLSEIVWEFSAMLRAELDYVREGRNAERFRQMFCTNPHIYIPRVYWEYTDS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECEEEEEECCC RILTTERIVGVKLNDMAGLRAAGVDMSRLARASLDITLEEIFTHGFFHSDPHPGNFFVLD EEEEHHHEEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC GDVLGVVDFGQVGTLDHATMQGLLWLMGALVNHDSQGLLRSLERLEVIPRRAANLALRRD CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LERFVEGFVDRPLGLISARETFDGLTTLLRRHRLTIPGPLATLLKTIVMMEGLGMQLDPN HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCC LNVFAAARPYIQRALREQMNPTALGAQALAGGRELGELAFDLPIQISQTLQHLNDGELRI CCEEECCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCEEE QTRELELRRLAAALIGAANRLALALVVAAFIVGVAALVIAMRALDWYGVLPWTLLFIGIG EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVITGGIMLTLALLRRE HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2 2-octaprenylphenol; O2 [C]
Specific reaction: 2 2-octaprenylphenol + O2 = 2 2-octaprenyl-6-hydroxyphenol [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]