| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is ttuD [H]
Identifier: 222523954
GI number: 222523954
Start: 829245
End: 830606
Strand: Reverse
Name: ttuD [H]
Synonym: Chy400_0669
Alternate gene names: 222523954
Gene position: 830606-829245 (Counterclockwise)
Preceding gene: 222523955
Following gene: 222523950
Centisome position: 15.76
GC content: 64.9
Gene sequence:
>1362_bases ATGTCTGAGCGATTGTTGACGGCGTCGCTGCGGGCGGCCTGGTGGGGACCTGCGGTTACGCGGATCATGGCTGCTGCCCT GGCCGCGGCTGATCCGTTCCAGGCCACGCTCACCGCTCTGCAGCGCGACGGCGACTGGCTGATGGTCGGCGAGCGCCGCT ACGATCTGCGGGCGTTTCAGCGTATCTGGCTGGTCGGTGCGGGCAAAGCCGGTGCAGCAATGGCACAGGCTGCGGTTCAG GTACTGGGAGATCGCCTGCACGGCGGCCTGGTCGTCGTGAAAGATGACGGTGCCCCACTGCCTGACCTGCCGGGTATCAC CCTGCTACGCGCCGCCCACCCGACCCCAGACGAACGGAGTGTACTGGCCGGTCAGCAACTCGCGACCTTGCTCGCCGGGG TCACCGCACACGACCTGGTCCTGGCCCTGATTTCCGGTGGTGGTTCAGCACTGCTCAACCTGCCGGTACCGGGGGTCACC CTGGCCGACATTCAGATCCTCACTGCCGAACTACTGGCCTGTGGCGCACCGATTGGCGCTATCAACACCCTGCGCAAGCA TCTCGATCAGATCAAAGGTGGCGGACTGGCGCGCATGGCGGCACCGGCAACACTCATTACCCTCATCCTCTCCGACGTTG TCGGTAGCCCACTTCAGGTCATCGCCTCCGGGCCAACCGTCGCCGATCCAACCACCTTTGCCGACGCCCTGGCGTTTCTC GAACAGTACGAATTAATGGAACGGTGTCCACCGGCTATCCTGACGTATCTGATGGCAGGTTCCCGTGGCGACCATCCAGA GACATTGAAACCGGGCGATCCCTTGCTCACGACGGTGCAGAACATTCTCATCGGGAGCAACGCTCAGGCCGCCCAGGCCG CACTTATTGCCGCCCGCGACGCCGGCTTCAACGCAATGCTCCTGACCACCTACCTGGAGGGAGAAGCTCGCGAGGTGGGG CACGTGCTGGCCGGCATTGCCCGCGAAATTGCCACATCCGGCCATCCACTGGCAACGCCGGCCTGCGTGATTGCCGGCGG CGAAACAACCGTAACCCTGCGTGGAACCGGATTGGGCGGACGGAACCAGGAGCTGGCGTTGAGTGCCGCCATCGCCCTCG ACGGCCTCGACCAGGCCGCCGTCATTGCCCTGGCAACCGATGGCGGCGACGGACCAACCGATGCTGCCGGCGCAGTTGCC ACCGGCACAACCGTCGCTCGTGCCAGAGCGATAGGCCACGATCCACTCACTCACCTGCGGCGCAACGACGCCTACCCCTT CTTCGCCGCCCTCGACGATCTCCTGCGCCCCGGCCCAACCGGCACCAACGTCAACGATCTGGTGTTTATTGTGGTCGGAT GA
Upstream 100 bases:
>100_bases AACGCCGGCAGCATGCACGAGGCGAAAAAAGCAGGGCTGGTACGGATGGAAGGCAAGCAGTACATTGTGCAAGATGGAGA CATTTGCCACTTCCTCTTCA
Downstream 100 bases:
>100_bases CAGCTTCATCCAGCGGTTTCAGCCTTCTGCGCTATAGCATGCCCGCCATCCACCCCTGCGGCCTCGTCACACGCGAGAGC GTTTCCCGCTTTCGATATGG
Product: Hydroxypyruvate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSERLLTASLRAAWWGPAVTRIMAAALAAADPFQATLTALQRDGDWLMVGERRYDLRAFQRIWLVGAGKAGAAMAQAAVQ VLGDRLHGGLVVVKDDGAPLPDLPGITLLRAAHPTPDERSVLAGQQLATLLAGVTAHDLVLALISGGGSALLNLPVPGVT LADIQILTAELLACGAPIGAINTLRKHLDQIKGGGLARMAAPATLITLILSDVVGSPLQVIASGPTVADPTTFADALAFL EQYELMERCPPAILTYLMAGSRGDHPETLKPGDPLLTTVQNILIGSNAQAAQAALIAARDAGFNAMLLTTYLEGEAREVG HVLAGIAREIATSGHPLATPACVIAGGETTVTLRGTGLGGRNQELALSAAIALDGLDQAAVIALATDGGDGPTDAAGAVA TGTTVARARAIGHDPLTHLRRNDAYPFFAALDDLLRPGPTGTNVNDLVFIVVG
Sequences:
>Translated_453_residues MSERLLTASLRAAWWGPAVTRIMAAALAAADPFQATLTALQRDGDWLMVGERRYDLRAFQRIWLVGAGKAGAAMAQAAVQ VLGDRLHGGLVVVKDDGAPLPDLPGITLLRAAHPTPDERSVLAGQQLATLLAGVTAHDLVLALISGGGSALLNLPVPGVT LADIQILTAELLACGAPIGAINTLRKHLDQIKGGGLARMAAPATLITLILSDVVGSPLQVIASGPTVADPTTFADALAFL EQYELMERCPPAILTYLMAGSRGDHPETLKPGDPLLTTVQNILIGSNAQAAQAALIAARDAGFNAMLLTTYLEGEAREVG HVLAGIAREIATSGHPLATPACVIAGGETTVTLRGTGLGGRNQELALSAAIALDGLDQAAVIALATDGGDGPTDAAGAVA TGTTVARARAIGHDPLTHLRRNDAYPFFAALDDLLRPGPTGTNVNDLVFIVVG >Mature_452_residues SERLLTASLRAAWWGPAVTRIMAAALAAADPFQATLTALQRDGDWLMVGERRYDLRAFQRIWLVGAGKAGAAMAQAAVQV LGDRLHGGLVVVKDDGAPLPDLPGITLLRAAHPTPDERSVLAGQQLATLLAGVTAHDLVLALISGGGSALLNLPVPGVTL ADIQILTAELLACGAPIGAINTLRKHLDQIKGGGLARMAAPATLITLILSDVVGSPLQVIASGPTVADPTTFADALAFLE QYELMERCPPAILTYLMAGSRGDHPETLKPGDPLLTTVQNILIGSNAQAAQAALIAARDAGFNAMLLTTYLEGEAREVGH VLAGIAREIATSGHPLATPACVIAGGETTVTLRGTGLGGRNQELALSAAIALDGLDQAAVIALATDGGDGPTDAAGAVAT GTTVARARAIGHDPLTHLRRNDAYPFFAALDDLLRPGPTGTNVNDLVFIVVG
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=523, Percent_Identity=38.4321223709369, Blast_Score=228, Evalue=1e-59, Organism=Caenorhabditis elegans, GI193205461, Length=468, Percent_Identity=31.4102564102564, Blast_Score=171, Evalue=7e-43, Organism=Drosophila melanogaster, GI19920578, Length=436, Percent_Identity=33.4862385321101, Blast_Score=166, Evalue=5e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 46456; Mature: 46325
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERLLTASLRAAWWGPAVTRIMAAALAAADPFQATLTALQRDGDWLMVGERRYDLRAFQ CCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCHHHHHHH RIWLVGAGKAGAAMAQAAVQVLGDRLHGGLVVVKDDGAPLPDLPGITLLRAAHPTPDERS HHHEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCHH VLAGQQLATLLAGVTAHDLVLALISGGGSALLNLPVPGVTLADIQILTAELLACGAPIGA HHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHH INTLRKHLDQIKGGGLARMAAPATLITLILSDVVGSPLQVIASGPTVADPTTFADALAFL HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHH EQYELMERCPPAILTYLMAGSRGDHPETLKPGDPLLTTVQNILIGSNAQAAQAALIAARD HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHEEECC AGFNAMLLTTYLEGEAREVGHVLAGIAREIATSGHPLATPACVIAGGETTVTLRGTGLGG CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEECCCCC RNQELALSAAIALDGLDQAAVIALATDGGDGPTDAAGAVATGTTVARARAIGHDPLTHLR CCCHHHEEHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHCCHHHHHHHHCCCCHHHHHH RNDAYPFFAALDDLLRPGPTGTNVNDLVFIVVG CCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEC >Mature Secondary Structure SERLLTASLRAAWWGPAVTRIMAAALAAADPFQATLTALQRDGDWLMVGERRYDLRAFQ CCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCHHHHHHH RIWLVGAGKAGAAMAQAAVQVLGDRLHGGLVVVKDDGAPLPDLPGITLLRAAHPTPDERS HHHEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCHH VLAGQQLATLLAGVTAHDLVLALISGGGSALLNLPVPGVTLADIQILTAELLACGAPIGA HHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHH INTLRKHLDQIKGGGLARMAAPATLITLILSDVVGSPLQVIASGPTVADPTTFADALAFL HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHH EQYELMERCPPAILTYLMAGSRGDHPETLKPGDPLLTTVQNILIGSNAQAAQAALIAARD HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHEEECC AGFNAMLLTTYLEGEAREVGHVLAGIAREIATSGHPLATPACVIAGGETTVTLRGTGLGG CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEECCCCC RNQELALSAAIALDGLDQAAVIALATDGGDGPTDAAGAVATGTTVARARAIGHDPLTHLR CCCHHHEEHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHCCHHHHHHHHCCCCHHHHHH RNDAYPFFAALDDLLRPGPTGTNVNDLVFIVVG CCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]