Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222523932
Identifier: 222523932
GI number: 222523932
Start: 791071
End: 791802
Strand: Direct
Name: 222523932
Synonym: Chy400_0643
Alternate gene names: NA
Gene position: 791071-791802 (Clockwise)
Preceding gene: 222523931
Following gene: 222523934
Centisome position: 15.01
GC content: 53.14
Gene sequence:
>732_bases ATGTTCCATGGAACCGCTCTCCTGGTTGAGCGTGATTCGCACCGCCGTGATGCCCTGATTTGTGGCCTGAGCCAGTCGTA TTGGGCTATTTTGGCGGTGAGTGACCCTGCAATTGCGCTTCATTGTTTGGAAACACGCACCTTTGATCTGTTGATTTTCA ATGTAGACCTGTTATCGTCGGTCCACTGGCGCATAGCAGCAAGGTATGTGCAACAATGCCCGAATGTGATCACCATATGG TACAACGGGAGTTCCCCCTCTCCATGCTATCAATCACACCTGTCGGAACGTGGTGGATCGGGTTCTGTCCAGGCGATCAT CGACCACATCCAACAGCAAGTAGCGCTGCACGCAGCACAAAAGCGGAAACACCTCGCCGAACCACAGGCGCAGGCGACCT ATGAGGTACCGGTACCATTGCTGGTCGATCCCTATCAAGGGAGCGTCTTTATTGCCGACACCGTCATTAAAGTGAGCAAA GGTGACATTGCCCTCTTACGTTGTCTTGCCGAGTCACCGCACCAGAAAGCGTCATTTGAAGCACTGGCTGCGGTTCTGTA TCCGCATGCATTCTCGCGCTCGGAAGCCCGCGAGCTAATCAAAGCGCGTATCCACTATCTGCGCCAAAAGCTGGAGGTTG ACCCAGACAAACCGGTTATTTGTTCGATTCGTGGATTTGGTTATGCATTACGCTCGCCGGTGGCTTTTTTGCCGGAGCAG CAACGACGATGA
Upstream 100 bases:
>100_bases TAGTACTAAATATTGGTAGGAGTTATGGTTGATTGCAAGTTTCGTCGAATTATTGTATGATTAGCCCCATACACAATGAA TTCATCACGAGGTTGTCATC
Downstream 100 bases:
>100_bases AACGAGGGAACCCGGCAGTAGAGATACGCTCGTGATCGAGGAATACGATGTCGGTGTGCGGAATGATGGTAACCTCGCAT CAACGCAATGAGCGCTCGCT
Product: putative winged helix family two component transcriptional regulator
Products: NA
Alternate protein names: Response Regulator Receiver Protein
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MFHGTALLVERDSHRRDALICGLSQSYWAILAVSDPAIALHCLETRTFDLLIFNVDLLSSVHWRIAARYVQQCPNVITIW YNGSSPSPCYQSHLSERGGSGSVQAIIDHIQQQVALHAAQKRKHLAEPQAQATYEVPVPLLVDPYQGSVFIADTVIKVSK GDIALLRCLAESPHQKASFEALAAVLYPHAFSRSEARELIKARIHYLRQKLEVDPDKPVICSIRGFGYALRSPVAFLPEQ QRR
Sequences:
>Translated_243_residues MFHGTALLVERDSHRRDALICGLSQSYWAILAVSDPAIALHCLETRTFDLLIFNVDLLSSVHWRIAARYVQQCPNVITIW YNGSSPSPCYQSHLSERGGSGSVQAIIDHIQQQVALHAAQKRKHLAEPQAQATYEVPVPLLVDPYQGSVFIADTVIKVSK GDIALLRCLAESPHQKASFEALAAVLYPHAFSRSEARELIKARIHYLRQKLEVDPDKPVICSIRGFGYALRSPVAFLPEQ QRR >Mature_243_residues MFHGTALLVERDSHRRDALICGLSQSYWAILAVSDPAIALHCLETRTFDLLIFNVDLLSSVHWRIAARYVQQCPNVITIW YNGSSPSPCYQSHLSERGGSGSVQAIIDHIQQQVALHAAQKRKHLAEPQAQATYEVPVPLLVDPYQGSVFIADTVIKVSK GDIALLRCLAESPHQKASFEALAAVLYPHAFSRSEARELIKARIHYLRQKLEVDPDKPVICSIRGFGYALRSPVAFLPEQ QRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27176; Mature: 27176
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHGTALLVERDSHRRDALICGLSQSYWAILAVSDPAIALHCLETRTFDLLIFNVDLLSS CCCCEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCEEEEEEEEHHHHHH VHWRIAARYVQQCPNVITIWYNGSSPSPCYQSHLSERGGSGSVQAIIDHIQQQVALHAAQ HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KRKHLAEPQAQATYEVPVPLLVDPYQGSVFIADTVIKVSKGDIALLRCLAESPHQKASFE HHHHHCCCCCCCEEECCCCEEECCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCHHHHH ALAAVLYPHAFSRSEARELIKARIHYLRQKLEVDPDKPVICSIRGFGYALRSPVAFLPEQ HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCHHCCCCC QRR CCC >Mature Secondary Structure MFHGTALLVERDSHRRDALICGLSQSYWAILAVSDPAIALHCLETRTFDLLIFNVDLLSS CCCCEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCEEEEEEEEHHHHHH VHWRIAARYVQQCPNVITIWYNGSSPSPCYQSHLSERGGSGSVQAIIDHIQQQVALHAAQ HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KRKHLAEPQAQATYEVPVPLLVDPYQGSVFIADTVIKVSKGDIALLRCLAESPHQKASFE HHHHHCCCCCCCEEECCCCEEECCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCHHHHH ALAAVLYPHAFSRSEARELIKARIHYLRQKLEVDPDKPVICSIRGFGYALRSPVAFLPEQ HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCHHCCCCC QRR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA