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The map label for this gene is ygbL [C]

Identifier: 222523926

GI number: 222523926

Start: 784319

End: 784996

Strand: Reverse

Name: ygbL [C]

Synonym: Chy400_0637

Alternate gene names: 222523926

Gene position: 784996-784319 (Counterclockwise)

Preceding gene: 222523927

Following gene: 222523925

Centisome position: 14.9

GC content: 56.64

Gene sequence:

>678_bases
ATGACAACCGATCTTCCTCTTGATGTTGAAACGGCATTACGTGCCGAAATGGTTCTTTGTGGTCGTTTACTCTACGAACG
TGGGCTGGTGGTTGCCGGCGACGGTAATCTCTCGGCACGCCTGCCAGATGACACCATCCTGATTACCCCTGCCGGCCTGG
CTAAGGGGATGTTGACGGTTGACGATCTACTCGTCATTGACCTCGATGGTCGATTGGTGCGTGGTGCACCGGGCCGCCAA
CCGTCATCAGAGCGCTATCTCCATCTCTTTGTCTATCGTCATCGGCCCGACATCATGGCGTGTATTCACGCCCATCCGCC
TACAGCGGTCGGAGCAACCCTGGCAGGTGTCAGTCTGGCCGAGCCATTATTGCCGGAAGCGCTGATTGCCCTTGGCCCGA
TCCCAACTGCCCCATACGCACTGACCGGTACGACCGAGATGGGGGCAGCTATTGAGCCATTTGTTGCCGATCATGAAGCG
ATCTTGCTTGCCTATCACGGTGCCGTAACATACGGCACAACATTACTGCAAGCCTTTCACCGTATGGAGCAGATTGAACA
CTGCGCACGCACGTTGCTGGCAGCTCATCTGTTTGGGGGAGCACGTCCTTTGCCGCCAGAACGACTCGCCGAATTGCAGG
AAGTGCGACGTGCCTTTCGCGCTGCTGGTCGGATTTAA

Upstream 100 bases:

>100_bases
GTGGTGATGCTCGCAATGCGCTTTAGCCGTCCACTGCTCGCCTGGTCGGGCTGGATTGTGGCGGCGTTCTTGCTCATTCG
CTTACGTCAACAGAAACGCT

Downstream 100 bases:

>100_bases
GTGACGAGGAGGATGGTATGAAGCTCTCACCAGCAAAAGTTGAGCAATTAGCTGCAATGCTGGTTGATGTTTTGGCCGAG
ACAGATGGGGTTTTGTTTCA

Product: class II aldolase/adducin family protein

Products: glycerone phosphate; (S)-lactaldehyde

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MTTDLPLDVETALRAEMVLCGRLLYERGLVVAGDGNLSARLPDDTILITPAGLAKGMLTVDDLLVIDLDGRLVRGAPGRQ
PSSERYLHLFVYRHRPDIMACIHAHPPTAVGATLAGVSLAEPLLPEALIALGPIPTAPYALTGTTEMGAAIEPFVADHEA
ILLAYHGAVTYGTTLLQAFHRMEQIEHCARTLLAAHLFGGARPLPPERLAELQEVRRAFRAAGRI

Sequences:

>Translated_225_residues
MTTDLPLDVETALRAEMVLCGRLLYERGLVVAGDGNLSARLPDDTILITPAGLAKGMLTVDDLLVIDLDGRLVRGAPGRQ
PSSERYLHLFVYRHRPDIMACIHAHPPTAVGATLAGVSLAEPLLPEALIALGPIPTAPYALTGTTEMGAAIEPFVADHEA
ILLAYHGAVTYGTTLLQAFHRMEQIEHCARTLLAAHLFGGARPLPPERLAELQEVRRAFRAAGRI
>Mature_224_residues
TTDLPLDVETALRAEMVLCGRLLYERGLVVAGDGNLSARLPDDTILITPAGLAKGMLTVDDLLVIDLDGRLVRGAPGRQP
SSERYLHLFVYRHRPDIMACIHAHPPTAVGATLAGVSLAEPLLPEALIALGPIPTAPYALTGTTEMGAAIEPFVADHEAI
LLAYHGAVTYGTTLLQAFHRMEQIEHCARTLLAAHLFGGARPLPPERLAELQEVRRAFRAAGRI

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=212, Percent_Identity=31.1320754716981, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1789164, Length=198, Percent_Identity=29.7979797979798, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: 4.1.2.17

Molecular weight: Translated: 24173; Mature: 24042

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDLPLDVETALRAEMVLCGRLLYERGLVVAGDGNLSARLPDDTILITPAGLAKGMLTV
CCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCEEEEECCHHHCCCEEE
DDLLVIDLDGRLVRGAPGRQPSSERYLHLFVYRHRPDIMACIHAHPPTAVGATLAGVSLA
CCEEEEECCCEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHH
EPLLPEALIALGPIPTAPYALTGTTEMGAAIEPFVADHEAILLAYHGAVTYGTTLLQAFH
HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHCCCCEEEEEECCHHHHHHHHHHHHH
RMEQIEHCARTLLAAHLFGGARPLPPERLAELQEVRRAFRAAGRI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTDLPLDVETALRAEMVLCGRLLYERGLVVAGDGNLSARLPDDTILITPAGLAKGMLTV
CCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCEEEEECCHHHCCCEEE
DDLLVIDLDGRLVRGAPGRQPSSERYLHLFVYRHRPDIMACIHAHPPTAVGATLAGVSLA
CCEEEEECCCEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHH
EPLLPEALIALGPIPTAPYALTGTTEMGAAIEPFVADHEAILLAYHGAVTYGTTLLQAFH
HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHCCCCEEEEEECCHHHHHHHHHHHHH
RMEQIEHCARTLLAAHLFGGARPLPPERLAELQEVRRAFRAAGRI
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-fuculose 1-phosphate

Specific reaction: L-fuculose 1-phosphate = glycerone phosphate + (S)-lactaldehyde

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]