Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is cvrA [H]
Identifier: 222523882
GI number: 222523882
Start: 706181
End: 707662
Strand: Direct
Name: cvrA [H]
Synonym: Chy400_0591
Alternate gene names: 222523882
Gene position: 706181-707662 (Clockwise)
Preceding gene: 222523880
Following gene: 222523884
Centisome position: 13.4
GC content: 56.48
Gene sequence:
>1482_bases ATGACAACTGAACCCCTCTTACTCATAACCGGTCTCCTATTGGCGATTAGTGTTGCTGCGACCCGTGCCTCAAACCGGTT TGGTGTACCGGCACTGATCCTGTTTATGGCAGTCGGTATGCTGGCCGGTTCTGACGGGCCGGGCGGTATTGCGTTTACCG ATGCCGGAGTAGCCCAACTGATCGGGGTGATTGCGCTGATCTACATCCTCTTTTCAGGAGGACTGGACACCGACTGGCAG ATTATCAAACCAGTCCTGACCGAGGGTTTGATTCTGGCGAATGTTGGTGTGCTGGTCAGCACCGTGATTGTTGCGGTTGG TGCCCACTTTATGCTCGGCTTTGACTGGCCCCTTGCCCTGCTTCTCGGCGCAATCGTCTCGTCCACCGACGCGGCGGCGG TCTTTAGTGTCATGCGCACGCGAGGGATACATCTCAAGCATCGGCTTGAACCACTCATCGAGCTGGAGTCGGGAAGTAAT GACCCGATTGCGGTCTTTCTCACCATCGGCTTAACCAACCTGGTGATCAACCCACAGGCATCGCTACTGACCCTTATCCC GTCTTTTATCATACAGATGATCCTCGGTGCTGCCGGTGGGTACGCCTTTGGCCGGTTGATGATCTGGGTGGTCAACCGCA TCCGGCTGCAACAGGAAGGGCTGTACGTGGTACTGACGATGGCCCTGACCCTGCTAACCTATGGCTTCACAGCGATCATC GGCGGCAATGGCTTTCTGGCGGTCTATCTGGCAGGTATCATTCTGGGCAATGCCAATATTGTTCACAAACGGTCTATTCT CCGTTTCCACGATGGTGTAGCGTGGCTCAGCCAGATTGCCATGTTCTTGATTTTGGGACTGCTGGTCTTTCCATCGCAGC TACCGGCAGTGGCCGGGCAGGGACTGGCAATGGCACTCTGGCTCGTCTTCGTCGCCCGACCGGTCTCGGTCATTATCGCC CTGGGCTGGAAACGTCGCTCATTACCGCAACTATTGATGATAGCCTGGGCTGGATTGCGGGGAGCAGTTCCGATTGTGCT GGCAACCTTCCCGCTGCTGGCCGGCGTTCCCGATGCGCCGCTCCTGTTCAACCTGGTCTTCTTCATCGTCCTGATCTCAG TCCTCTTGCAAGGTATCTCTATCGGCTGGGTCGCCCGTCGCCTGGGCGTGATGACCGATCAGGCCGAAGTGATAGACAGC CACCTCTTCGTGCCAGAAGTCAGTGGAGCCAGTCAAATCCTGGAAGCACAAATTCCGCCAGACTCAGCACTGGTTGGCAA ATCGCTGATCGACGCCGATCTCCCACGCGGCTTACTTATCGTGCAGATTCAGCGTGCAGACGGCTACATTATCCCGAACG GCAGTACTGTCTTTGCGCCTAATGATCGGCTGGTATTACTGGTGGCACCCACCGCGATGCCGGCGGTGACTGAGCTGTGC GCCAGTTGTAGTCTGAATCCCATCGGCTCACTGTTGAAGTGA
Upstream 100 bases:
>100_bases AGTACCTGTTCAAAGTATGTAAGCCAGCTTACCAAACATAGATAATCTGCTTCAGGTACACCTATGCTATGCTAGTAATA CGAGCATGTTGGAGAGAGCG
Downstream 100 bases:
>100_bases GGAGAGGCGACGAGCATAGCCGGCGCTACTGCGTGAATGTACGAAATAGCTGCTATGCAGAAGCGAGCACCGTGGGGTAA GTAGCGGGTAAGCACATATT
Product: potassium/proton antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MTTEPLLLITGLLLAISVAATRASNRFGVPALILFMAVGMLAGSDGPGGIAFTDAGVAQLIGVIALIYILFSGGLDTDWQ IIKPVLTEGLILANVGVLVSTVIVAVGAHFMLGFDWPLALLLGAIVSSTDAAAVFSVMRTRGIHLKHRLEPLIELESGSN DPIAVFLTIGLTNLVINPQASLLTLIPSFIIQMILGAAGGYAFGRLMIWVVNRIRLQQEGLYVVLTMALTLLTYGFTAII GGNGFLAVYLAGIILGNANIVHKRSILRFHDGVAWLSQIAMFLILGLLVFPSQLPAVAGQGLAMALWLVFVARPVSVIIA LGWKRRSLPQLLMIAWAGLRGAVPIVLATFPLLAGVPDAPLLFNLVFFIVLISVLLQGISIGWVARRLGVMTDQAEVIDS HLFVPEVSGASQILEAQIPPDSALVGKSLIDADLPRGLLIVQIQRADGYIIPNGSTVFAPNDRLVLLVAPTAMPAVTELC ASCSLNPIGSLLK
Sequences:
>Translated_493_residues MTTEPLLLITGLLLAISVAATRASNRFGVPALILFMAVGMLAGSDGPGGIAFTDAGVAQLIGVIALIYILFSGGLDTDWQ IIKPVLTEGLILANVGVLVSTVIVAVGAHFMLGFDWPLALLLGAIVSSTDAAAVFSVMRTRGIHLKHRLEPLIELESGSN DPIAVFLTIGLTNLVINPQASLLTLIPSFIIQMILGAAGGYAFGRLMIWVVNRIRLQQEGLYVVLTMALTLLTYGFTAII GGNGFLAVYLAGIILGNANIVHKRSILRFHDGVAWLSQIAMFLILGLLVFPSQLPAVAGQGLAMALWLVFVARPVSVIIA LGWKRRSLPQLLMIAWAGLRGAVPIVLATFPLLAGVPDAPLLFNLVFFIVLISVLLQGISIGWVARRLGVMTDQAEVIDS HLFVPEVSGASQILEAQIPPDSALVGKSLIDADLPRGLLIVQIQRADGYIIPNGSTVFAPNDRLVLLVAPTAMPAVTELC ASCSLNPIGSLLK >Mature_492_residues TTEPLLLITGLLLAISVAATRASNRFGVPALILFMAVGMLAGSDGPGGIAFTDAGVAQLIGVIALIYILFSGGLDTDWQI IKPVLTEGLILANVGVLVSTVIVAVGAHFMLGFDWPLALLLGAIVSSTDAAAVFSVMRTRGIHLKHRLEPLIELESGSND PIAVFLTIGLTNLVINPQASLLTLIPSFIIQMILGAAGGYAFGRLMIWVVNRIRLQQEGLYVVLTMALTLLTYGFTAIIG GNGFLAVYLAGIILGNANIVHKRSILRFHDGVAWLSQIAMFLILGLLVFPSQLPAVAGQGLAMALWLVFVARPVSVIIAL GWKRRSLPQLLMIAWAGLRGAVPIVLATFPLLAGVPDAPLLFNLVFFIVLISVLLQGISIGWVARRLGVMTDQAEVIDSH LFVPEVSGASQILEAQIPPDSALVGKSLIDADLPRGLLIVQIQRADGYIIPNGSTVFAPNDRLVLLVAPTAMPAVTELCA SCSLNPIGSLLK
Specific function: Participates in control of cell volume in low-osmolarity conditions [H]
COG id: COG3263
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87081854, Length=461, Percent_Identity=39.2624728850325, Blast_Score=271, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR016169 - InterPro: IPR006037 - InterPro: IPR005170 [H]
Pfam domain/function: PF03471 CorC_HlyC; PF00999 Na_H_Exchanger; PF02080 TrkA_C [H]
EC number: NA
Molecular weight: Translated: 52124; Mature: 51993
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEPLLLITGLLLAISVAATRASNRFGVPALILFMAVGMLAGSDGPGGIAFTDAGVAQL CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHH IGVIALIYILFSGGLDTDWQIIKPVLTEGLILANVGVLVSTVIVAVGAHFMLGFDWPLAL HHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LLGAIVSSTDAAAVFSVMRTRGIHLKHRLEPLIELESGSNDPIAVFLTIGLTNLVINPQA HHHHHHCCCHHHHHHHHHHHCCCCHHHHHCHHEEECCCCCCCEEEEEEECHHHEEECCCH SLLTLIPSFIIQMILGAAGGYAFGRLMIWVVNRIRLQQEGLYVVLTMALTLLTYGFTAII HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEE GGNGFLAVYLAGIILGNANIVHKRSILRFHDGVAWLSQIAMFLILGLLVFPSQLPAVAGQ CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHCC GLAMALWLVFVARPVSVIIALGWKRRSLPQLLMIAWAGLRGAVPIVLATFPLLAGVPDAP HHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCH LLFNLVFFIVLISVLLQGISIGWVARRLGVMTDQAEVIDSHLFVPEVSGASQILEAQIPP HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCC DSALVGKSLIDADLPRGLLIVQIQRADGYIIPNGSTVFAPNDRLVLLVAPTAMPAVTELC CHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCEEECCCCCEEEEECCCCHHHHHHHH ASCSLNPIGSLLK HHCCCCHHHHHCC >Mature Secondary Structure TTEPLLLITGLLLAISVAATRASNRFGVPALILFMAVGMLAGSDGPGGIAFTDAGVAQL CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHH IGVIALIYILFSGGLDTDWQIIKPVLTEGLILANVGVLVSTVIVAVGAHFMLGFDWPLAL HHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LLGAIVSSTDAAAVFSVMRTRGIHLKHRLEPLIELESGSNDPIAVFLTIGLTNLVINPQA HHHHHHCCCHHHHHHHHHHHCCCCHHHHHCHHEEECCCCCCCEEEEEEECHHHEEECCCH SLLTLIPSFIIQMILGAAGGYAFGRLMIWVVNRIRLQQEGLYVVLTMALTLLTYGFTAII HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEE GGNGFLAVYLAGIILGNANIVHKRSILRFHDGVAWLSQIAMFLILGLLVFPSQLPAVAGQ CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHCC GLAMALWLVFVARPVSVIIALGWKRRSLPQLLMIAWAGLRGAVPIVLATFPLLAGVPDAP HHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCH LLFNLVFFIVLISVLLQGISIGWVARRLGVMTDQAEVIDSHLFVPEVSGASQILEAQIPP HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCC DSALVGKSLIDADLPRGLLIVQIQRADGYIIPNGSTVFAPNDRLVLLVAPTAMPAVTELC CHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCEEECCCCCEEEEECCCCHHHHHHHH ASCSLNPIGSLLK HHCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA