| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523870
Identifier: 222523870
GI number: 222523870
Start: 689717
End: 690958
Strand: Reverse
Name: 222523870
Synonym: Chy400_0578
Alternate gene names: NA
Gene position: 690958-689717 (Counterclockwise)
Preceding gene: 222523871
Following gene: 222523869
Centisome position: 13.11
GC content: 56.44
Gene sequence:
>1242_bases ATGGTGCCGTCGCCAACGGTGCAACCATCTCCTACCGTTGTGCAGATACCCACCCAACAACCAACAGTGGTAGTGGCTCC GTCGCCAACTGCGATACCAACCAGTGTGCCACAGCCTACAGCAACGGCTCCGACGCCGGTTTTTCCTGTCCCAACCCCTG ATCCGGCCTTGATGCAGCGTAAACCGCCACTGGGTACCTTCTTCTTCTACTGGTACAACTGTCCGCAACAAGAATGCGAC TCTAGTCAACTACTCGCTGTACCACCGGGATGGCTAACCCCATTGCCTGCTGATCCCGACCCGCGCGATGGTTTCAGTTA CTCGTCCTATAACTATGACTGGTACGAGAACGAACTACGCACGATGGCGTCTATCGGTATCTCGATGGTCTTTCCGGTGA GTTGGGGCGATCATCCCCATCCCTGGTTTCGGAATGATCGGCTCAATCTGCTTGTGCAGGCCAACGGTGTATTGGAACAC CCACTGACCATCGGGATGTTTCTCGATACTACTGCCCAACAGGGGATGTATCAAGAGTTTCTGGGAAATGGTTATCGGTT TGGTCCTGATGCGCCACGATTACCACTCAGCGATCCACGGAGCGGCTACTTTTTCTACAACCTGCATATTCGCGATTTCT TCACCCGCGTCCCCCGTGAGATGTGGGCGACTATCGATGGCCGACCCATTATCATCACCTACACCGCTCTCTGCTGTGAT AATCTGGAATTGAGCGGGACTCTCTGGCAGGCGGTGAAAGATGCCTTTCGGGCTGATTTTGGTGTTGAGCCGTGGCTCAT TCTGGAAGAGACGTGGCTCAATCCGCAGGCGCTGGCACCACCGGAAGGTTTGCCGGATAGCGCTCAGGTTGCTGATGGGG TGTACCGCTGGGGAACAGCCCTCCTTGGTCCGCATACTGCTGAATTGCGTGGCTTCAAGGTCAGTAGTGTCGGTCCTGGT TTTGATAATTCGCGTATTCCCTGGGTGCGTGAACCACGAGGTCAGCCGCGCGATGAGCCGCCCGGTGGTGGTTCTCCGGC ACCCGGCGCATTCCTGCGCGCCAGTCTGGCTGCTATCCCGCCCGATACCGATCTGGTCTTGATCGAGACCTGGAACGAAT GGCCTGAAAACAGCGCCGTCGCTCCTGCTGCCTACACCGACCGCGATGGTCGTCCACTACCACCCGATTTTTACCTCCAG ATCATTCGCCAATGGCGTGAGCAGTTTGTGCCGCAACCATGA
Upstream 100 bases:
>100_bases GTGCTGGTGTGTCTGTCTGATAATCGCTGGTTTGCTGATCGCTTGTAGTCCACCGGTGCCCGTTCCCCCGTCACCTACAG TGGCAGCAACGCCAGCATTG
Downstream 100 bases:
>100_bases TGGCATCGGAGAGGAAAGCGGAAAGTTCAGGATGCAGAACGGGGACAGGTCGATGCCTTCCCCGTTCTGCATCTTCCGTG TCGTATAGTTTGGTGTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MVPSPTVQPSPTVVQIPTQQPTVVVAPSPTAIPTSVPQPTATAPTPVFPVPTPDPALMQRKPPLGTFFFYWYNCPQQECD SSQLLAVPPGWLTPLPADPDPRDGFSYSSYNYDWYENELRTMASIGISMVFPVSWGDHPHPWFRNDRLNLLVQANGVLEH PLTIGMFLDTTAQQGMYQEFLGNGYRFGPDAPRLPLSDPRSGYFFYNLHIRDFFTRVPREMWATIDGRPIIITYTALCCD NLELSGTLWQAVKDAFRADFGVEPWLILEETWLNPQALAPPEGLPDSAQVADGVYRWGTALLGPHTAELRGFKVSSVGPG FDNSRIPWVREPRGQPRDEPPGGGSPAPGAFLRASLAAIPPDTDLVLIETWNEWPENSAVAPAAYTDRDGRPLPPDFYLQ IIRQWREQFVPQP
Sequences:
>Translated_413_residues MVPSPTVQPSPTVVQIPTQQPTVVVAPSPTAIPTSVPQPTATAPTPVFPVPTPDPALMQRKPPLGTFFFYWYNCPQQECD SSQLLAVPPGWLTPLPADPDPRDGFSYSSYNYDWYENELRTMASIGISMVFPVSWGDHPHPWFRNDRLNLLVQANGVLEH PLTIGMFLDTTAQQGMYQEFLGNGYRFGPDAPRLPLSDPRSGYFFYNLHIRDFFTRVPREMWATIDGRPIIITYTALCCD NLELSGTLWQAVKDAFRADFGVEPWLILEETWLNPQALAPPEGLPDSAQVADGVYRWGTALLGPHTAELRGFKVSSVGPG FDNSRIPWVREPRGQPRDEPPGGGSPAPGAFLRASLAAIPPDTDLVLIETWNEWPENSAVAPAAYTDRDGRPLPPDFYLQ IIRQWREQFVPQP >Mature_413_residues MVPSPTVQPSPTVVQIPTQQPTVVVAPSPTAIPTSVPQPTATAPTPVFPVPTPDPALMQRKPPLGTFFFYWYNCPQQECD SSQLLAVPPGWLTPLPADPDPRDGFSYSSYNYDWYENELRTMASIGISMVFPVSWGDHPHPWFRNDRLNLLVQANGVLEH PLTIGMFLDTTAQQGMYQEFLGNGYRFGPDAPRLPLSDPRSGYFFYNLHIRDFFTRVPREMWATIDGRPIIITYTALCCD NLELSGTLWQAVKDAFRADFGVEPWLILEETWLNPQALAPPEGLPDSAQVADGVYRWGTALLGPHTAELRGFKVSSVGPG FDNSRIPWVREPRGQPRDEPPGGGSPAPGAFLRASLAAIPPDTDLVLIETWNEWPENSAVAPAAYTDRDGRPLPPDFYLQ IIRQWREQFVPQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46050; Mature: 46050
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPSPTVQPSPTVVQIPTQQPTVVVAPSPTAIPTSVPQPTATAPTPVFPVPTPDPALMQR CCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHCC KPPLGTFFFYWYNCPQQECDSSQLLAVPPGWLTPLPADPDPRDGFSYSSYNYDWYENELR CCCCCEEEEEEECCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH TMASIGISMVFPVSWGDHPHPWFRNDRLNLLVQANGVLEHPLTIGMFLDTTAQQGMYQEF HHHHCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHH LGNGYRFGPDAPRLPLSDPRSGYFFYNLHIRDFFTRVPREMWATIDGRPIIITYTALCCD HCCCEEECCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCHHHHHHCCCCEEEEEEEEEHHC NLELSGTLWQAVKDAFRADFGVEPWLILEETWLNPQALAPPEGLPDSAQVADGVYRWGTA CCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LLGPHTAELRGFKVSSVGPGFDNSRIPWVREPRGQPRDEPPGGGSPAPGAFLRASLAAIP HCCCCHHHHCCEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCC PDTDLVLIETWNEWPENSAVAPAAYTDRDGRPLPPDFYLQIIRQWREQFVPQP CCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVPSPTVQPSPTVVQIPTQQPTVVVAPSPTAIPTSVPQPTATAPTPVFPVPTPDPALMQR CCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHCC KPPLGTFFFYWYNCPQQECDSSQLLAVPPGWLTPLPADPDPRDGFSYSSYNYDWYENELR CCCCCEEEEEEECCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH TMASIGISMVFPVSWGDHPHPWFRNDRLNLLVQANGVLEHPLTIGMFLDTTAQQGMYQEF HHHHCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHH LGNGYRFGPDAPRLPLSDPRSGYFFYNLHIRDFFTRVPREMWATIDGRPIIITYTALCCD HCCCEEECCCCCCCCCCCCCCCEEEEEEEHHHHHHHCCHHHHHHCCCCEEEEEEEEEHHC NLELSGTLWQAVKDAFRADFGVEPWLILEETWLNPQALAPPEGLPDSAQVADGVYRWGTA CCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LLGPHTAELRGFKVSSVGPGFDNSRIPWVREPRGQPRDEPPGGGSPAPGAFLRASLAAIP HCCCCHHHHCCEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCC PDTDLVLIETWNEWPENSAVAPAAYTDRDGRPLPPDFYLQIIRQWREQFVPQP CCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA