| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523842
Identifier: 222523842
GI number: 222523842
Start: 657176
End: 658228
Strand: Reverse
Name: 222523842
Synonym: Chy400_0550
Alternate gene names: NA
Gene position: 658228-657176 (Counterclockwise)
Preceding gene: 222523843
Following gene: 222523841
Centisome position: 12.49
GC content: 53.09
Gene sequence:
>1053_bases ATGCGACGTGGCGCATTACTGTTTCTACTGATCGGACTTATCGTCATTATCGGTGGATTGGCGGCTTTCTTGCTGTTACG CGGCGGGGCTGCAACATCCACCACCTCACAAACACCCGAAGTACCTCCACCGCCGACAGCAGTGCCATTGGTGTCAGTCG TTCAGGCCCGTGTCGATCTCGAGGCCAATACACTATTGAATGATCCTTCTTTGCTTGATGTTGTTGAAGTACCGGTAACC GAATTTGACGAAGCAAACGAATTTAGCAACATTAATGATGTTTTGGGCAAACTGTTGATCAATCCGGTTGTAGCCGGACA ATCGATCCGGAAAGATAATATTCGTGAAGCCGGTCTGGCGCAGCGTATACCTACTGCTGAACCTGGTCAGGCTCAGGTAA AAGCCTATCCGCTGATTGTTAACAGCCTGTCGGGTGTTGCCGATCAGGTTGCCGTCAATGACTTTGTTGACGTGATTGCT ACGTTTTCAGTTGAACGCCAGATTATCCGTCCCGGCCCTGTGCAGGTTATTACCGTGAATGACGTCGACCAGCTTGTACG GGAGTACCAGTACGGCGAAAATCAGACCTTCTTCTCTACCAAGACGATCATTCAGCGTGCTCAGGTATTGCAAATTGTGC GCCCTGCGCTACCGGCTCCCACAGAGGGAGAAGAAACCACTACTGAGGCCGTTACACCACCTGCTTCGTCGAGTCTGCCA CAAGTTGATGCATCAGGGCAGCCGATTACTGGTGCTCAGACTGCTGAAGGTGGGGCTACAACGCCTAGCACGTTAACTGA AGGGGTATGGGTTGTTGTGCTGGCCTTGACCGATCAGGAAATTGAACTGCTGGAGTTTGCGTTACAGTCACAGGCCCGGA TTGTGCTGGCGCTGCGTGGGGCAAACGACGACGCTATTGAGTCGACCAGTGGTGTCACCCTCGATCTGTTGGTGCGCGAG TACGGTCTGCCCCTGCCGCGTCCCTTGCCACCGCGGGTTTACGGTGAAGACGAGGTCTTTGTACCTGAACCAACCCCAAC TCCGCTGCCATAA
Upstream 100 bases:
>100_bases AAGGTGTCACATTCCTGTCACCTCTTGCTTGCGTATGCTATAATGGCAACGCAATGCGCGGAGTCACCTGACTTCGCTCT GAACAGGAAGGTTGCCTTCT
Downstream 100 bases:
>100_bases CCTATTCCATGAGCGGCAGCTCTGAGGTACAATGACATCGTAGCATTCTATCATATAGTCATAAACTGTCTTGATCGTTT GCCACAACTCACGTCCGTTT
Product: SAF domain-containing protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein CpaB
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MRRGALLFLLIGLIVIIGGLAAFLLLRGGAATSTTSQTPEVPPPPTAVPLVSVVQARVDLEANTLLNDPSLLDVVEVPVT EFDEANEFSNINDVLGKLLINPVVAGQSIRKDNIREAGLAQRIPTAEPGQAQVKAYPLIVNSLSGVADQVAVNDFVDVIA TFSVERQIIRPGPVQVITVNDVDQLVREYQYGENQTFFSTKTIIQRAQVLQIVRPALPAPTEGEETTTEAVTPPASSSLP QVDASGQPITGAQTAEGGATTPSTLTEGVWVVVLALTDQEIELLEFALQSQARIVLALRGANDDAIESTSGVTLDLLVRE YGLPLPRPLPPRVYGEDEVFVPEPTPTPLP
Sequences:
>Translated_350_residues MRRGALLFLLIGLIVIIGGLAAFLLLRGGAATSTTSQTPEVPPPPTAVPLVSVVQARVDLEANTLLNDPSLLDVVEVPVT EFDEANEFSNINDVLGKLLINPVVAGQSIRKDNIREAGLAQRIPTAEPGQAQVKAYPLIVNSLSGVADQVAVNDFVDVIA TFSVERQIIRPGPVQVITVNDVDQLVREYQYGENQTFFSTKTIIQRAQVLQIVRPALPAPTEGEETTTEAVTPPASSSLP QVDASGQPITGAQTAEGGATTPSTLTEGVWVVVLALTDQEIELLEFALQSQARIVLALRGANDDAIESTSGVTLDLLVRE YGLPLPRPLPPRVYGEDEVFVPEPTPTPLP >Mature_350_residues MRRGALLFLLIGLIVIIGGLAAFLLLRGGAATSTTSQTPEVPPPPTAVPLVSVVQARVDLEANTLLNDPSLLDVVEVPVT EFDEANEFSNINDVLGKLLINPVVAGQSIRKDNIREAGLAQRIPTAEPGQAQVKAYPLIVNSLSGVADQVAVNDFVDVIA TFSVERQIIRPGPVQVITVNDVDQLVREYQYGENQTFFSTKTIIQRAQVLQIVRPALPAPTEGEETTTEAVTPPASSSLP QVDASGQPITGAQTAEGGATTPSTLTEGVWVVVLALTDQEIELLEFALQSQARIVLALRGANDDAIESTSGVTLDLLVRE YGLPLPRPLPPRVYGEDEVFVPEPTPTPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37268; Mature: 37268
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRGALLFLLIGLIVIIGGLAAFLLLRGGAATSTTSQTPEVPPPPTAVPLVSVVQARVDL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC EANTLLNDPSLLDVVEVPVTEFDEANEFSNINDVLGKLLINPVVAGQSIRKDNIREAGLA CHHHHCCCCCHHHHHHCCCHHCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH QRIPTAEPGQAQVKAYPLIVNSLSGVADQVAVNDFVDVIATFSVERQIIRPGPVQVITVN HCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC DVDQLVREYQYGENQTFFSTKTIIQRAQVLQIVRPALPAPTEGEETTTEAVTPPASSSLP CHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCC QVDASGQPITGAQTAEGGATTPSTLTEGVWVVVLALTDQEIELLEFALQSQARIVLALRG CCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEEECCCHHHHHHHHHHCCCEEEEEEEC ANDDAIESTSGVTLDLLVREYGLPLPRPLPPRVYGEDEVFVPEPTPTPLP CCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCC >Mature Secondary Structure MRRGALLFLLIGLIVIIGGLAAFLLLRGGAATSTTSQTPEVPPPPTAVPLVSVVQARVDL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC EANTLLNDPSLLDVVEVPVTEFDEANEFSNINDVLGKLLINPVVAGQSIRKDNIREAGLA CHHHHCCCCCHHHHHHCCCHHCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH QRIPTAEPGQAQVKAYPLIVNSLSGVADQVAVNDFVDVIATFSVERQIIRPGPVQVITVN HCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC DVDQLVREYQYGENQTFFSTKTIIQRAQVLQIVRPALPAPTEGEETTTEAVTPPASSSLP CHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCC QVDASGQPITGAQTAEGGATTPSTLTEGVWVVVLALTDQEIELLEFALQSQARIVLALRG CCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEEECCCHHHHHHHHHHCCCEEEEEEEC ANDDAIESTSGVTLDLLVREYGLPLPRPLPPRVYGEDEVFVPEPTPTPLP CCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA