| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yoaR [H]
Identifier: 222523791
GI number: 222523791
Start: 593725
End: 595764
Strand: Reverse
Name: yoaR [H]
Synonym: Chy400_0499
Alternate gene names: 222523791
Gene position: 595764-593725 (Counterclockwise)
Preceding gene: 222523792
Following gene: 222523784
Centisome position: 11.31
GC content: 55.69
Gene sequence:
>2040_bases GTGTCGGTTCAGCATTCGCAGCCTTTCAATCCAACTCACGAGCGCACCGACGGTGAGGTGTTTTCACCATCATTGCCCGG TGCTGTTGACTGGCCGGATCAAGTGGTTCATCCTCCGGCAGTGCAGCGTGGCACAGGCCGGCGTACCCGACGCAAGGTAT CCCGTGGATGGTGGTGGTTGCTGTTAGTTGTATTGTCTGGCCTGGCGATTGTTGGTACAGGCATGGTGTTCCTTGATCGC TCGTATGCCGGACGGATTCTTCCCAATGTGACGGTGCGAGGCGTTGCGGTTGGAAATATGACCCGTGAGGAAGCACGAGC GGCGATTGAGGCCAGCTTTGCGCCTTTTCTGGCTCAGCCGGTTGTGCTAACCTACAGTGGTCGTTCCTGGACGCCAACGC TTGCTGAGTTGGGTGTTGCACTTGAAATTGACGAGGCACTCGATGCAGCGCTGGCGGTAGGGCGGAGTGCGAACCTCTTT ACCGATCTCCAGCAGATGAGTGCGGTCTGGCAATATGGGATTGATATTCCCTTGCGCCTCTCTATCGATCAAGATGCGAT GCAACGCTATCTGCTAGCCAGGGTGGCAGAGGTTGAACAACCGGCACGTGATGCCCATCTGATGTTACACGGCACGACGG TGGAAGTAGCACCGAGTGCAGTGGGGCGGCAGGTGCTTGTGGCTGAGACATTGCAAGAGATATTGTCTGCAATTCAGGAT TTGAATCCTGATACAGTCGCATTGCGTACTCGTGCCCTTGAGCCATCACTTCGTGATGATGCAGCATTCCTCGCCCAGGA TCAGATCGCAGCTCTCCTGGCAGGGCCGGTAACACTGCTGGTTGATAATCGTCCGTTTGTCTGGTCGCTCGATGAACTAG CGCGGATGATTCGCGTTGAGCGGATTTCCGATCCGATGGGCGACCGGCTGGAGGTGAGCGTTGATCATGATATGGTGATG GAAAAGTTGATCGCGCTCGGCGATTCAACTGAAGTCAAGGGTACCTATCCACGCCTCAACTGGAACGAAGGGAAGTTAGA GATTTTTCAACCGGGCAAGCCAGGTAAACGAATCGACGAAGCGCAGGCGCTGAATGCGGTGCTCGAAGCATTGAACAAAC CGGCGGATCAACGCACGGTAACGGTAAACTTCCGCGAGATACCACCACCGGTCACGGCTGACAACCTCGATCAGTTGGGC ATTACGACTCTGCTTGGAGTTGGCCGCAGCGATTTCACCGGTTCGGCACCCTACCGTGTAACCAATATCCAGGCCGGCAT GCGCTTGTTGCACGGTATTCTCATTCCACCCGGTGAAGAGTTTTCATTCAATCAGACGATTGGTCGCATCGATAGCTCAA ATGGCTTTGTTGAAGGTTATGCCATCATTCAGAATCGTACTCAGTTAGAGTGGGGTGGTGGGATTTGCCAGGATAGCACA ACTGTCTTTCGTGCTGCATTCTGGGCCGGTTTGCCGATTACCGAGCGTTGGGGGCATTCATTTTATATTAGCTGGTACGA CCGCTATGGGTTTGGTCCATACGGTGATGGCCCCGGTATGGATGCCACTATCTTCACCGGTGGCCCTGACCTGAAGTTTC TCAACGACACCGGTGGTTGGATTTTGATGCAGACAATGGTTGATACGCGGCGGAATCTGGCCGAAGTGCGGCTCTACGGT CCTGAGACCGGACGGAAGGTACTGTTAGAAGGGCCGGTGATCACCAATCGCACACCGCCACCGACCGAGCCGGTCTACGT TGCGGTTCCTGAGCGTCCGGTAGGCCAGCCACGGCAGAGCGATAAAGCACGCGGTGGAATGGATATCCTTTTCACCCGCA TTGTACTTGGGCCTGACGGTAAAGAGATCGAGCGCCGTGAGTTCGTGACGCGCTTCAAGCCCTGGCCGGATATTTTTGAG TACAATCCCGCCGATCTCGGCCCTGATGGTAAACCATTGCCGACGCCGACACCGCCACCGGCAGAACCGATACCGGTGGA ACAGCCACCGGTCGAACCGCCGACAGATGCGACAGGGTGA
Upstream 100 bases:
>100_bases CAAAAGCAAGCAATTTGTCAGCTTTGTTTTATTGACATCCCCCATTGACAAGAGTATATTAGGTTGTCAGACAAATTTAC AGGTGGCAAGGAGGGTTTTG
Downstream 100 bases:
>100_bases ATTGTGTGGGGCAGGCTTCTAGCCTGCCCCAGTTTATTCCTTTACACGTTTACCAATAATAATTATAATTATTCGTGTAC TACAACCGCTGAGTCAATTT
Product: VanW family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 679; Mature: 678
Protein sequence:
>679_residues MSVQHSQPFNPTHERTDGEVFSPSLPGAVDWPDQVVHPPAVQRGTGRRTRRKVSRGWWWLLLVVLSGLAIVGTGMVFLDR SYAGRILPNVTVRGVAVGNMTREEARAAIEASFAPFLAQPVVLTYSGRSWTPTLAELGVALEIDEALDAALAVGRSANLF TDLQQMSAVWQYGIDIPLRLSIDQDAMQRYLLARVAEVEQPARDAHLMLHGTTVEVAPSAVGRQVLVAETLQEILSAIQD LNPDTVALRTRALEPSLRDDAAFLAQDQIAALLAGPVTLLVDNRPFVWSLDELARMIRVERISDPMGDRLEVSVDHDMVM EKLIALGDSTEVKGTYPRLNWNEGKLEIFQPGKPGKRIDEAQALNAVLEALNKPADQRTVTVNFREIPPPVTADNLDQLG ITTLLGVGRSDFTGSAPYRVTNIQAGMRLLHGILIPPGEEFSFNQTIGRIDSSNGFVEGYAIIQNRTQLEWGGGICQDST TVFRAAFWAGLPITERWGHSFYISWYDRYGFGPYGDGPGMDATIFTGGPDLKFLNDTGGWILMQTMVDTRRNLAEVRLYG PETGRKVLLEGPVITNRTPPPTEPVYVAVPERPVGQPRQSDKARGGMDILFTRIVLGPDGKEIERREFVTRFKPWPDIFE YNPADLGPDGKPLPTPTPPPAEPIPVEQPPVEPPTDATG
Sequences:
>Translated_679_residues MSVQHSQPFNPTHERTDGEVFSPSLPGAVDWPDQVVHPPAVQRGTGRRTRRKVSRGWWWLLLVVLSGLAIVGTGMVFLDR SYAGRILPNVTVRGVAVGNMTREEARAAIEASFAPFLAQPVVLTYSGRSWTPTLAELGVALEIDEALDAALAVGRSANLF TDLQQMSAVWQYGIDIPLRLSIDQDAMQRYLLARVAEVEQPARDAHLMLHGTTVEVAPSAVGRQVLVAETLQEILSAIQD LNPDTVALRTRALEPSLRDDAAFLAQDQIAALLAGPVTLLVDNRPFVWSLDELARMIRVERISDPMGDRLEVSVDHDMVM EKLIALGDSTEVKGTYPRLNWNEGKLEIFQPGKPGKRIDEAQALNAVLEALNKPADQRTVTVNFREIPPPVTADNLDQLG ITTLLGVGRSDFTGSAPYRVTNIQAGMRLLHGILIPPGEEFSFNQTIGRIDSSNGFVEGYAIIQNRTQLEWGGGICQDST TVFRAAFWAGLPITERWGHSFYISWYDRYGFGPYGDGPGMDATIFTGGPDLKFLNDTGGWILMQTMVDTRRNLAEVRLYG PETGRKVLLEGPVITNRTPPPTEPVYVAVPERPVGQPRQSDKARGGMDILFTRIVLGPDGKEIERREFVTRFKPWPDIFE YNPADLGPDGKPLPTPTPPPAEPIPVEQPPVEPPTDATG >Mature_678_residues SVQHSQPFNPTHERTDGEVFSPSLPGAVDWPDQVVHPPAVQRGTGRRTRRKVSRGWWWLLLVVLSGLAIVGTGMVFLDRS YAGRILPNVTVRGVAVGNMTREEARAAIEASFAPFLAQPVVLTYSGRSWTPTLAELGVALEIDEALDAALAVGRSANLFT DLQQMSAVWQYGIDIPLRLSIDQDAMQRYLLARVAEVEQPARDAHLMLHGTTVEVAPSAVGRQVLVAETLQEILSAIQDL NPDTVALRTRALEPSLRDDAAFLAQDQIAALLAGPVTLLVDNRPFVWSLDELARMIRVERISDPMGDRLEVSVDHDMVME KLIALGDSTEVKGTYPRLNWNEGKLEIFQPGKPGKRIDEAQALNAVLEALNKPADQRTVTVNFREIPPPVTADNLDQLGI TTLLGVGRSDFTGSAPYRVTNIQAGMRLLHGILIPPGEEFSFNQTIGRIDSSNGFVEGYAIIQNRTQLEWGGGICQDSTT VFRAAFWAGLPITERWGHSFYISWYDRYGFGPYGDGPGMDATIFTGGPDLKFLNDTGGWILMQTMVDTRRNLAEVRLYGP ETGRKVLLEGPVITNRTPPPTEPVYVAVPERPVGQPRQSDKARGGMDILFTRIVLGPDGKEIERREFVTRFKPWPDIFEY NPADLGPDGKPLPTPTPPPAEPIPVEQPPVEPPTDATG
Specific function: Unknown
COG id: COG2720
COG function: function code V; Uncharacterized vancomycin resistance protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022029 - InterPro: IPR007391 [H]
Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]
EC number: NA
Molecular weight: Translated: 74674; Mature: 74543
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQHSQPFNPTHERTDGEVFSPSLPGAVDWPDQVVHPPAVQRGTGRRTRRKVSRGWWWL CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHH LLVVLSGLAIVGTGMVFLDRSYAGRILPNVTVRGVAVGNMTREEARAAIEASFAPFLAQP HHHHHHCHHHHHCCEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC VVLTYSGRSWTPTLAELGVALEIDEALDAALAVGRSANLFTDLQQMSAVWQYGIDIPLRL EEEEECCCCCCCHHHHCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEE SIDQDAMQRYLLARVAEVEQPARDAHLMLHGTTVEVAPSAVGRQVLVAETLQEILSAIQD ECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEECHHHHCCHHHHHHHHHHHHHHHHC LNPDTVALRTRALEPSLRDDAAFLAQDQIAALLAGPVTLLVDNRPFVWSLDELARMIRVE CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEECHHHHHHHHHHH RISDPMGDRLEVSVDHDMVMEKLIALGDSTEVKGTYPRLNWNEGKLEIFQPGKPGKRIDE HHCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHH AQALNAVLEALNKPADQRTVTVNFREIPPPVTADNLDQLGITTLLGVGRSDFTGSAPYRV HHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEE TNIQAGMRLLHGILIPPGEEFSFNQTIGRIDSSNGFVEGYAIIQNRTQLEWGGGICQDST EEHHHHHHHHHHEECCCCCCCCCCHHHCCCCCCCCEEEEEEEECCCCEEECCCCCCCCCH TVFRAAFWAGLPITERWGHSFYISWYDRYGFGPYGDGPGMDATIFTGGPDLKFLNDTGGW HHHHHHHHCCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEECCCCE ILMQTMVDTRRNLAEVRLYGPETGRKVLLEGPVITNRTPPPTEPVYVAVPERPVGQPRQS EEHHHHHHHHCCCEEEEEECCCCCCEEEEECCEECCCCCCCCCCEEEECCCCCCCCCCCC DKARGGMDILFTRIVLGPDGKEIERREFVTRFKPWPDIFEYNPADLGPDGKPLPTPTPPP HHHCCCHHEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCC AEPIPVEQPPVEPPTDATG CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVQHSQPFNPTHERTDGEVFSPSLPGAVDWPDQVVHPPAVQRGTGRRTRRKVSRGWWWL CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHH LLVVLSGLAIVGTGMVFLDRSYAGRILPNVTVRGVAVGNMTREEARAAIEASFAPFLAQP HHHHHHCHHHHHCCEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC VVLTYSGRSWTPTLAELGVALEIDEALDAALAVGRSANLFTDLQQMSAVWQYGIDIPLRL EEEEECCCCCCCHHHHCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEE SIDQDAMQRYLLARVAEVEQPARDAHLMLHGTTVEVAPSAVGRQVLVAETLQEILSAIQD ECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEECHHHHCCHHHHHHHHHHHHHHHHC LNPDTVALRTRALEPSLRDDAAFLAQDQIAALLAGPVTLLVDNRPFVWSLDELARMIRVE CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEECHHHHHHHHHHH RISDPMGDRLEVSVDHDMVMEKLIALGDSTEVKGTYPRLNWNEGKLEIFQPGKPGKRIDE HHCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHH AQALNAVLEALNKPADQRTVTVNFREIPPPVTADNLDQLGITTLLGVGRSDFTGSAPYRV HHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEE TNIQAGMRLLHGILIPPGEEFSFNQTIGRIDSSNGFVEGYAIIQNRTQLEWGGGICQDST EEHHHHHHHHHHEECCCCCCCCCCHHHCCCCCCCCEEEEEEEECCCCEEECCCCCCCCCH TVFRAAFWAGLPITERWGHSFYISWYDRYGFGPYGDGPGMDATIFTGGPDLKFLNDTGGW HHHHHHHHCCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEECCCCE ILMQTMVDTRRNLAEVRLYGPETGRKVLLEGPVITNRTPPPTEPVYVAVPERPVGQPRQS EEHHHHHHHHCCCEEEEEECCCCCCEEEEECCEECCCCCCCCCCEEEECCCCCCCCCCCC DKARGGMDILFTRIVLGPDGKEIERREFVTRFKPWPDIFEYNPADLGPDGKPLPTPTPPP HHHCCCHHEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCC AEPIPVEQPPVEPPTDATG CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]