| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523770
Identifier: 222523770
GI number: 222523770
Start: 575197
End: 575700
Strand: Reverse
Name: 222523770
Synonym: Chy400_0477
Alternate gene names: NA
Gene position: 575700-575197 (Counterclockwise)
Preceding gene: 222523771
Following gene: 222523769
Centisome position: 10.93
GC content: 58.53
Gene sequence:
>504_bases TTGTATCACGAACGAGCTTATCTCATGCGCGAATGGTTACTTTCGACGACCTACCAGTTTCTGATAAATATGCGGTTTGT TGCCTGGCGTGTCCTTCGTCCGCGTGCAATTGGTGTGCGGGTGATTGTACAGCAGGGTGATTCATTTTTGCTAGTGCGGC ATCGCGGAGGAGCAGCGCCGTGGGGATTGCCCGGCGGTGCTATTGACCGGGGTGAGACGCCTGCCGATGCTGCCCGTCGT GAAGCGCTGGAAGAGAGTGGCTGCCCGGTCACCATCACGGCGCTGCATGGGGTCTTTCATTATCTGGCAGACGGTCTGAG CGATTATATTATTGTATTTACGGCAGCAGCCGAGGGGCCGCCGGTGCCGCCAACCGGCGATCTGGAGATTTGTGATGCGC GCTTCTTTCATCCCGATCAGTTGCCCGCAGGCGTGGAAGCCGGTAGTGCGCGGCGGATTGCCGAGGCGCGGCGTGGCGAA CGTGGAATCTTTGCATCCTGGTAG
Upstream 100 bases:
>100_bases CACCACTCGCACGTGTTATCATGTAAATGGGCATATTGAAAAGGCAGCAATCTGACGAAATGTATAACAGTACCCCTGTC CTGTTACAGGATAGGGGTGT
Downstream 100 bases:
>100_bases TTGTTGTTGAGGTGGTTATGCCCTACACACCAATTCTGGCCACACTTGGTTATGTGCTATCGCCCGACCGGCAATCGGTC TTGATGGTTCATCGCAATGC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MYHERAYLMREWLLSTTYQFLINMRFVAWRVLRPRAIGVRVIVQQGDSFLLVRHRGGAAPWGLPGGAIDRGETPADAARR EALEESGCPVTITALHGVFHYLADGLSDYIIVFTAAAEGPPVPPTGDLEICDARFFHPDQLPAGVEAGSARRIAEARRGE RGIFASW
Sequences:
>Translated_167_residues MYHERAYLMREWLLSTTYQFLINMRFVAWRVLRPRAIGVRVIVQQGDSFLLVRHRGGAAPWGLPGGAIDRGETPADAARR EALEESGCPVTITALHGVFHYLADGLSDYIIVFTAAAEGPPVPPTGDLEICDARFFHPDQLPAGVEAGSARRIAEARRGE RGIFASW >Mature_167_residues MYHERAYLMREWLLSTTYQFLINMRFVAWRVLRPRAIGVRVIVQQGDSFLLVRHRGGAAPWGLPGGAIDRGETPADAARR EALEESGCPVTITALHGVFHYLADGLSDYIIVFTAAAEGPPVPPTGDLEICDARFFHPDQLPAGVEAGSARRIAEARRGE RGIFASW
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18459; Mature: 18459
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHERAYLMREWLLSTTYQFLINMRFVAWRVLRPRAIGVRVIVQQGDSFLLVRHRGGAAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCC WGLPGGAIDRGETPADAARREALEESGCPVTITALHGVFHYLADGLSDYIIVFTAAAEGP CCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEEEEECCCCC PVPPTGDLEICDARFFHPDQLPAGVEAGSARRIAEARRGERGIFASW CCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MYHERAYLMREWLLSTTYQFLINMRFVAWRVLRPRAIGVRVIVQQGDSFLLVRHRGGAAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCC WGLPGGAIDRGETPADAARREALEESGCPVTITALHGVFHYLADGLSDYIIVFTAAAEGP CCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEEEEECCCCC PVPPTGDLEICDARFFHPDQLPAGVEAGSARRIAEARRGERGIFASW CCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA