| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523645
Identifier: 222523645
GI number: 222523645
Start: 417428
End: 417748
Strand: Reverse
Name: 222523645
Synonym: Chy400_0351
Alternate gene names: NA
Gene position: 417748-417428 (Counterclockwise)
Preceding gene: 222523655
Following gene: 222523644
Centisome position: 7.93
GC content: 54.52
Gene sequence:
>321_bases ATGAACCCGGCAACCGTTCGTCATGTACTTGAGCAGATCAGCATCCCGGACGATAGTACTATTAGCCGCACCATCTATCA GGACGATCAGATCAAAGCGGTCTTATTTGGTTTCGCTGCTGGTCAGGAGCTTTCCGAACATACGGCGGCCACACCGGCAA TCATGCACTTCGTGCAGGGTGAAGCACGGGTGACGCTTGGTCAAGAGGTTGTCGAAGCAAAACCCGGTACCTGGGTGCAT ATGCCGGCTCATCTGCCTCACAGCATTCAGGCGCATACGCCGGTGATCATGCTCTTGCTGCTGTTACGTGGTACACGGTA G
Upstream 100 bases:
>100_bases TTTGCAGACGTGCCTGTGCATCTGCTGGAATGATCGCCTGAAGATATGTGTTTCGGCTCAACCCCGCCGTCAAACCCGGC CCTGATCAGGGGGAGGAACT
Downstream 100 bases:
>100_bases GACGCGCGTCATGCAGGTTTACACGCTGTTGAGATAGGTATATGCAGCAGCATAACTCTGCCGCAACAACAAAGCCAGCG CCGGTACGCCTGCGCCCAAT
Product: Cupin 2 barrel domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cytoplasmic Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Cupin 2 Conserved Barrel Protein; Cupin Region
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MNPATVRHVLEQISIPDDSTISRTIYQDDQIKAVLFGFAAGQELSEHTAATPAIMHFVQGEARVTLGQEVVEAKPGTWVH MPAHLPHSIQAHTPVIMLLLLLRGTR
Sequences:
>Translated_106_residues MNPATVRHVLEQISIPDDSTISRTIYQDDQIKAVLFGFAAGQELSEHTAATPAIMHFVQGEARVTLGQEVVEAKPGTWVH MPAHLPHSIQAHTPVIMLLLLLRGTR >Mature_106_residues MNPATVRHVLEQISIPDDSTISRTIYQDDQIKAVLFGFAAGQELSEHTAATPAIMHFVQGEARVTLGQEVVEAKPGTWVH MPAHLPHSIQAHTPVIMLLLLLRGTR
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11656; Mature: 11656
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPATVRHVLEQISIPDDSTISRTIYQDDQIKAVLFGFAAGQELSEHTAATPAIMHFVQG CCHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHCC EARVTLGQEVVEAKPGTWVHMPAHLPHSIQAHTPVIMLLLLLRGTR CCEEEHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNPATVRHVLEQISIPDDSTISRTIYQDDQIKAVLFGFAAGQELSEHTAATPAIMHFVQG CCHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHCC EARVTLGQEVVEAKPGTWVHMPAHLPHSIQAHTPVIMLLLLLRGTR CCEEEHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA