| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523643
Identifier: 222523643
GI number: 222523643
Start: 415227
End: 416357
Strand: Reverse
Name: 222523643
Synonym: Chy400_0349
Alternate gene names: NA
Gene position: 416357-415227 (Counterclockwise)
Preceding gene: 222523644
Following gene: 222523642
Centisome position: 7.9
GC content: 55.17
Gene sequence:
>1131_bases ATGCTCTTCACACGAAGGAAAAAGGCCGGAATAACACTTGTTGGGTTCATTCTTCTCGTAGTATCGCTGGTGGCCTGTAC GAATCAGAGTGCATCACAGACTGCCCCTCAGACTATTCGGGAAACCGTAGTCGTCACTCAGGAAGTTCCTGTTCGGGAAA CGGTAGTTGTGCGCGAGACAGTGGAAGTTCCGGTTGAGGAACCGATTGTCTACGTCTACTCTGCCCGTCACTACGGCCAG ATGGAAACGGCGTTTGCCGAATTTACAAAAGAGACGGGCATTGAGGTGCGGTTTACCTTTGGCAGCGATGCCGAATTGCG TGAGCGGTTGAAAGCTGAGGGGCGCTTCACACCGGCTGATGTGCTGTTCACGGTCGATGCCGCCAATCTCTGGCTGGCAG CGCAGGAAGGTTTGCTGCGTCCGATCAATTCGGATGTGTTGGAGAGCAATATTCCCGACTATTTGCAGGATCCGAGCAAT CAGTGGTATGCTCTCTCCCTGCGGGTGCGCACCATCGCGTACCATCCAGATCGGGTCAATCCTGAAGAGATCGCCACCTA CGAGTCGCTGGCCGATCCAAAGTGGGCAGGCCGCATCTGCTGGCGCCCGTCAACCAAGTCGTACACCCAGTCGCTGGTGA GCAGCCTGATTGTCCACCACGGCTACGACAAGGCCAAAGAGATTGTGACTGGCTGGGCACAGAATGCCAAAGAGTATATT GACAGCGACACGCGAATTTTGCAGACCATTGCCGAGGGAGGATGCGACATCAGTGTTGTCAATCACTACTACCTGGCTCG CTTGCTCAGTGAAGACGCCAATTACCCGGTTAAGCTCCTCTGGGCCAATCAGGCCGAGCAGGGTGTGCATGTGAACGCTA GTGGCGCCGGTGTGACGACATACGCCCGCCATCCAGAGAATGCCATTCGCTTGCTTGAGTGGCTGAGCACCGAGCGCGGT CAGCGTCTGTTCGCCGACAGCAATTTCGAGTATCCGGCAAACCCCAATGTAGCACCGCATGAGCTGATCCAGCAGTGGGG TGACTTCAAGCGCGATACACTGCAGATTAGCGAGATTGGCAGTCTGCAAGCTGATGCGATCAAGCTGATGAACGAAGCCG GGTATCAATAA
Upstream 100 bases:
>100_bases GACAGGCAATCTTAATTTAAGAAGTATTTGGTTGACTAAATTGGATTATTAGTGTATACTAATAAAGTCAATAAGGTTCT AGTAATTGGGGAGGAGATAC
Downstream 100 bases:
>100_bases ACCGGGTTGTACCCGATAATTATAGAGGAGTCAACGGGCGATGCGCAGTATGATCGTCCCGTTGACTCGCCGGTATTGGA ACGTCATGCTGATTAAACGT
Product: family 1 extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MLFTRRKKAGITLVGFILLVVSLVACTNQSASQTAPQTIRETVVVTQEVPVRETVVVRETVEVPVEEPIVYVYSARHYGQ METAFAEFTKETGIEVRFTFGSDAELRERLKAEGRFTPADVLFTVDAANLWLAAQEGLLRPINSDVLESNIPDYLQDPSN QWYALSLRVRTIAYHPDRVNPEEIATYESLADPKWAGRICWRPSTKSYTQSLVSSLIVHHGYDKAKEIVTGWAQNAKEYI DSDTRILQTIAEGGCDISVVNHYYLARLLSEDANYPVKLLWANQAEQGVHVNASGAGVTTYARHPENAIRLLEWLSTERG QRLFADSNFEYPANPNVAPHELIQQWGDFKRDTLQISEIGSLQADAIKLMNEAGYQ
Sequences:
>Translated_376_residues MLFTRRKKAGITLVGFILLVVSLVACTNQSASQTAPQTIRETVVVTQEVPVRETVVVRETVEVPVEEPIVYVYSARHYGQ METAFAEFTKETGIEVRFTFGSDAELRERLKAEGRFTPADVLFTVDAANLWLAAQEGLLRPINSDVLESNIPDYLQDPSN QWYALSLRVRTIAYHPDRVNPEEIATYESLADPKWAGRICWRPSTKSYTQSLVSSLIVHHGYDKAKEIVTGWAQNAKEYI DSDTRILQTIAEGGCDISVVNHYYLARLLSEDANYPVKLLWANQAEQGVHVNASGAGVTTYARHPENAIRLLEWLSTERG QRLFADSNFEYPANPNVAPHELIQQWGDFKRDTLQISEIGSLQADAIKLMNEAGYQ >Mature_376_residues MLFTRRKKAGITLVGFILLVVSLVACTNQSASQTAPQTIRETVVVTQEVPVRETVVVRETVEVPVEEPIVYVYSARHYGQ METAFAEFTKETGIEVRFTFGSDAELRERLKAEGRFTPADVLFTVDAANLWLAAQEGLLRPINSDVLESNIPDYLQDPSN QWYALSLRVRTIAYHPDRVNPEEIATYESLADPKWAGRICWRPSTKSYTQSLVSSLIVHHGYDKAKEIVTGWAQNAKEYI DSDTRILQTIAEGGCDISVVNHYYLARLLSEDANYPVKLLWANQAEQGVHVNASGAGVTTYARHPENAIRLLEWLSTERG QRLFADSNFEYPANPNVAPHELIQQWGDFKRDTLQISEIGSLQADAIKLMNEAGYQ
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 42266; Mature: 42266
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFTRRKKAGITLVGFILLVVSLVACTNQSASQTAPQTIRETVVVTQEVPVRETVVVRET CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCCCCCEEEEEHH VEVPVEEPIVYVYSARHYGQMETAFAEFTKETGIEVRFTFGSDAELRERLKAEGRFTPAD HCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCHH VLFTVDAANLWLAAQEGLLRPINSDVLESNIPDYLQDPSNQWYALSLRVRTIAYHPDRVN EEEEEECHHEEEEHHCCCCCCCCHHHHHCCCCHHHCCCCCCEEEEEEEEEEEEECCCCCC PEEIATYESLADPKWAGRICWRPSTKSYTQSLVSSLIVHHGYDKAKEIVTGWAQNAKEYI HHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH DSDTRILQTIAEGGCDISVVNHYYLARLLSEDANYPVKLLWANQAEQGVHVNASGAGVTT CCHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCCEE YARHPENAIRLLEWLSTERGQRLFADSNFEYPANPNVAPHELIQQWGDFKRDTLQISEIG ECCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHEEEHHHCC SLQADAIKLMNEAGYQ CCHHHHHHHHHHCCCC >Mature Secondary Structure MLFTRRKKAGITLVGFILLVVSLVACTNQSASQTAPQTIRETVVVTQEVPVRETVVVRET CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCCCCCEEEEEHH VEVPVEEPIVYVYSARHYGQMETAFAEFTKETGIEVRFTFGSDAELRERLKAEGRFTPAD HCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCHH VLFTVDAANLWLAAQEGLLRPINSDVLESNIPDYLQDPSNQWYALSLRVRTIAYHPDRVN EEEEEECHHEEEEHHCCCCCCCCHHHHHCCCCHHHCCCCCCEEEEEEEEEEEEECCCCCC PEEIATYESLADPKWAGRICWRPSTKSYTQSLVSSLIVHHGYDKAKEIVTGWAQNAKEYI HHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH DSDTRILQTIAEGGCDISVVNHYYLARLLSEDANYPVKLLWANQAEQGVHVNASGAGVTT CCHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCCEE YARHPENAIRLLEWLSTERGQRLFADSNFEYPANPNVAPHELIQQWGDFKRDTLQISEIG ECCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHEEEHHHCC SLQADAIKLMNEAGYQ CCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]