| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523611
Identifier: 222523611
GI number: 222523611
Start: 379888
End: 381318
Strand: Direct
Name: 222523611
Synonym: Chy400_0317
Alternate gene names: NA
Gene position: 379888-381318 (Clockwise)
Preceding gene: 222523608
Following gene: 222523612
Centisome position: 7.21
GC content: 56.32
Gene sequence:
>1431_bases ATGGAACGACATAACACCGTACTATCGTTACCCACGCTACGTGGTCTGGTGGGCAAGCTCGTTTATACCTCTGGCTCACA TGCCTTTTCTCGCTCCATCTTGAAAGGTAGACGTTACGCTCAGGATAGGTGGGGAAGCTTCATCGAAAGCCGTTCCTGGG GCTGGATTATGTTGATGATCGTGGCCGGTGTGGTTGGTGGATGGCTCCTGCTTCACAACGCCCGGCCAACGCTGAGTGCC GGCTCAATCGTCGTCACTACCACCGATGATGAACTGAATAGTGATGGTGACTGTTCTTTGCGCGAGGCGATCCAGGCGGT GAATACGCAAAGTCCAGTTGACGCCTGTCCGACCGGTAGTGGCAACGACACCATCACCCTGCCGGCGGGCGTCTACACAT TGAACATCGCTGGCGCAGGTGAAGATAACAATACCACCGGTGATCTGGACATCTTCGCAACAGCTTCGGCAGTGACCCGC ACGCTCATCATTCAAGGCAATGGTGCTTCAACCACGGTTGTGGACGGCAATCAGCTTGATCGGGTCTTCCATCTTGTAGC CAGGGCACCTGTAAGATTTCAGGATGACCTTCTGGTGCTGCGAGACCTCACCGTGCGGAATGGTCGCCTGCCTGCTGCGA CTCGAGAAGGTGGTGCTGGATTGCTAAGCTGGGGCCGCCTCGAACTCTACAACGTGATCATCGAAAACAATGCCACGACC GGTACGAGCAGCAGTGATGTTGGCGGCGGCTTTTGCATTGGCTGTGGTCCCGGTACCGGTAGCGGATACCTGGAGAACGT TATCGTGCGCAACAATGCTGCTCAAAGAGGCGGTGGTGTCTTCAGCAATCGGCCGCTGACCATCACCGCCAGTAGCATCA TCAGCAACACCGCAGTCGCCAGAGGGGCAATCGAGAACTACGGCGCCCTGACGCTGATCAATGTCACGGTGAGCAATAAC TTCGCCAGCAATAATACCGGCGGAATCGGACACTTTGCCGGCTCGCTCAGCGTGCTCAACAGCACGATCAGTCACAACAC GAGCCGTGGGATTCTCTTCGACGCGCCGGCAACGCTCAAAAACACTCTCCTCGCCTACAACACACCCGGCGGGAACTGCT TTATCTCTACACCACCAACATCACAGGGTTACAACCTGAGTAACGATAATAGTTGCGCCAGTTTACTGACGGCCAGTGGT GATCTGAACAATGTTGATCCACAACTCGGCCCGTTGCAGAACAACGGCGGCTTCACCCCAACACGGGCGCTTGCCCTGAC CTCACCTGCGGTTAATGCCGGTACCAACAGCGACTGTCCGGCTACCGACCAGCGCGGCGTTACCCGTCCCCAAGACGGAA CGTGTGACATCGGCGCGTATGAGCTTCAAGTGCAGCGGGTTCATCTGCCCCTGGTACTGAAACAGTCATGA
Upstream 100 bases:
>100_bases TGAGCCTGGCAAGCGCAGTATGCATGTAGACGTTTTGTAGACGCCTCTTGTGTATGCTGGAGACAACCACGAACGATGTG TAACTACACAAGAGGCGAGT
Downstream 100 bases:
>100_bases GTCGGGCCAGCACGGTATGCATGTAGACGTTTTGTAGACGCTTCTTGTGTATGCTGAGAGGTATCGCAATACAGCTATCT CCCAGCCGTTCAGGAGGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Polymorphic Membrane Protein; Extracellular Nuclease; Outer Membrane Adhesin Like Proteiin; Fibronectin Type III Domain-Containing Protein; Lipoprotein Receptor-Related Protein
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MERHNTVLSLPTLRGLVGKLVYTSGSHAFSRSILKGRRYAQDRWGSFIESRSWGWIMLMIVAGVVGGWLLLHNARPTLSA GSIVVTTTDDELNSDGDCSLREAIQAVNTQSPVDACPTGSGNDTITLPAGVYTLNIAGAGEDNNTTGDLDIFATASAVTR TLIIQGNGASTTVVDGNQLDRVFHLVARAPVRFQDDLLVLRDLTVRNGRLPAATREGGAGLLSWGRLELYNVIIENNATT GTSSSDVGGGFCIGCGPGTGSGYLENVIVRNNAAQRGGGVFSNRPLTITASSIISNTAVARGAIENYGALTLINVTVSNN FASNNTGGIGHFAGSLSVLNSTISHNTSRGILFDAPATLKNTLLAYNTPGGNCFISTPPTSQGYNLSNDNSCASLLTASG DLNNVDPQLGPLQNNGGFTPTRALALTSPAVNAGTNSDCPATDQRGVTRPQDGTCDIGAYELQVQRVHLPLVLKQS
Sequences:
>Translated_476_residues MERHNTVLSLPTLRGLVGKLVYTSGSHAFSRSILKGRRYAQDRWGSFIESRSWGWIMLMIVAGVVGGWLLLHNARPTLSA GSIVVTTTDDELNSDGDCSLREAIQAVNTQSPVDACPTGSGNDTITLPAGVYTLNIAGAGEDNNTTGDLDIFATASAVTR TLIIQGNGASTTVVDGNQLDRVFHLVARAPVRFQDDLLVLRDLTVRNGRLPAATREGGAGLLSWGRLELYNVIIENNATT GTSSSDVGGGFCIGCGPGTGSGYLENVIVRNNAAQRGGGVFSNRPLTITASSIISNTAVARGAIENYGALTLINVTVSNN FASNNTGGIGHFAGSLSVLNSTISHNTSRGILFDAPATLKNTLLAYNTPGGNCFISTPPTSQGYNLSNDNSCASLLTASG DLNNVDPQLGPLQNNGGFTPTRALALTSPAVNAGTNSDCPATDQRGVTRPQDGTCDIGAYELQVQRVHLPLVLKQS >Mature_476_residues MERHNTVLSLPTLRGLVGKLVYTSGSHAFSRSILKGRRYAQDRWGSFIESRSWGWIMLMIVAGVVGGWLLLHNARPTLSA GSIVVTTTDDELNSDGDCSLREAIQAVNTQSPVDACPTGSGNDTITLPAGVYTLNIAGAGEDNNTTGDLDIFATASAVTR TLIIQGNGASTTVVDGNQLDRVFHLVARAPVRFQDDLLVLRDLTVRNGRLPAATREGGAGLLSWGRLELYNVIIENNATT GTSSSDVGGGFCIGCGPGTGSGYLENVIVRNNAAQRGGGVFSNRPLTITASSIISNTAVARGAIENYGALTLINVTVSNN FASNNTGGIGHFAGSLSVLNSTISHNTSRGILFDAPATLKNTLLAYNTPGGNCFISTPPTSQGYNLSNDNSCASLLTASG DLNNVDPQLGPLQNNGGFTPTRALALTSPAVNAGTNSDCPATDQRGVTRPQDGTCDIGAYELQVQRVHLPLVLKQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49720; Mature: 49720
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERHNTVLSLPTLRGLVGKLVYTSGSHAFSRSILKGRRYAQDRWGSFIESRSWGWIMLMI CCCCCEEEECHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VAGVVGGWLLLHNARPTLSAGSIVVTTTDDELNSDGDCSLREAIQAVNTQSPVDACPTGS HHHHHHCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC GNDTITLPAGVYTLNIAGAGEDNNTTGDLDIFATASAVTRTLIIQGNGASTTVVDGNQLD CCCEEEECCCEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEECCCCCEEEECCHHHH RVFHLVARAPVRFQDDLLVLRDLTVRNGRLPAATREGGAGLLSWGRLELYNVIIENNATT HHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEECCCEEEEEEEEECCCCC GTSSSDVGGGFCIGCGPGTGSGYLENVIVRNNAAQRGGGVFSNRPLTITASSIISNTAVA CCCCCCCCCEEEEECCCCCCCHHHEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHH RGAIENYGALTLINVTVSNNFASNNTGGIGHFAGSLSVLNSTISHNTSRGILFDAPATLK HCCHHCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHH NTLLAYNTPGGNCFISTPPTSQGYNLSNDNSCASLLTASGDLNNVDPQLGPLQNNGGFTP CCEEEEECCCCCEEEECCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCH TRALALTSPAVNAGTNSDCPATDQRGVTRPQDGTCDIGAYELQVQRVHLPLVLKQS HEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECC >Mature Secondary Structure MERHNTVLSLPTLRGLVGKLVYTSGSHAFSRSILKGRRYAQDRWGSFIESRSWGWIMLMI CCCCCEEEECHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VAGVVGGWLLLHNARPTLSAGSIVVTTTDDELNSDGDCSLREAIQAVNTQSPVDACPTGS HHHHHHCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC GNDTITLPAGVYTLNIAGAGEDNNTTGDLDIFATASAVTRTLIIQGNGASTTVVDGNQLD CCCEEEECCCEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEECCCCCEEEECCHHHH RVFHLVARAPVRFQDDLLVLRDLTVRNGRLPAATREGGAGLLSWGRLELYNVIIENNATT HHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEECCCEEEEEEEEECCCCC GTSSSDVGGGFCIGCGPGTGSGYLENVIVRNNAAQRGGGVFSNRPLTITASSIISNTAVA CCCCCCCCCEEEEECCCCCCCHHHEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHH RGAIENYGALTLINVTVSNNFASNNTGGIGHFAGSLSVLNSTISHNTSRGILFDAPATLK HCCHHCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHH NTLLAYNTPGGNCFISTPPTSQGYNLSNDNSCASLLTASGDLNNVDPQLGPLQNNGGFTP CCEEEEECCCCCEEEECCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCH TRALALTSPAVNAGTNSDCPATDQRGVTRPQDGTCDIGAYELQVQRVHLPLVLKQS HEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA