| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523583
Identifier: 222523583
GI number: 222523583
Start: 350222
End: 351016
Strand: Reverse
Name: 222523583
Synonym: Chy400_0289
Alternate gene names: NA
Gene position: 351016-350222 (Counterclockwise)
Preceding gene: 222523584
Following gene: 222523582
Centisome position: 6.66
GC content: 53.08
Gene sequence:
>795_bases ATGCTGCGTTGGGAACCGATCAAGGTGATTATTGCCAAAGAGTGGCTGGAGCTGCGGCGGTCGCGAGGATTGCTCTTAAG TATGCTGTTGCCCCCCATCTTTCTGCCACTGTTTGCCCTTGGTCTCATCTTTGTGATGGGGCTGGTAAGCGATCCGGATA CCGCCGACATTCCGGCGGCGGCTGTTGATCCGGCGCTGGCCAATCTGGGGTTAGAGGCGCTGGCTCAGGTTATCTTCGGG CGGCAGTTTTCGACCCTGTTTCTTTTGTTGCCGATGATCATTCCGAATGTCCTTGCCTCCTACAGTATCGTTGGCGAAAA GAATCGACGCACCCTCGAACCATTGCTGGCAGCACCAATCAAGGTAAGTGAGCTGTTACTCGGTAAGGTGTTAGCCGCAA TTATTCCAGGGATTGTGCTGACCTGGGGATGTGCCATCGTTTTTGCTGTGGGCTTAGCGATTGTTGTCGTCGATCCGCAG GTGCCTGCTCTCGTGCTGCAACCAGGATGGGTAGCAACACTTCTCTTATCCAGTCCACTCTTAGCCATCATTTCAGTTGC ACTTACGGTAATGATTTCATCACGGGTAAACGATCCACGTAGTGCCCAACAAATTGCTGGAGTGCTGATTGTGCCGGTGA TGCTGCTTTTCTTTGGTCAGATGCTGGGACTTTTTGTGCTGAATGTTGTGGTGGCACTGATCTTCGCCCTGGTATTGGCG CTGATCGCAGCAGGTCTGATCTGGCTGGCAACCAACGTCTTTCAACGGGAAGAGATTCTGACCCGCTGGCGCTAA
Upstream 100 bases:
>100_bases GCACGATGACCGTACTGGTTACGGGTACGACGTGCGTTATCGTCACGATCTTTGGTCCTGTTAATTCAATTCTCATATAC CCTTCTCCAGAGAGATGATT
Downstream 100 bases:
>100_bases CGCTCTTGCGCAAACGAGTATAATTGTCTCAAAACAAACGAGATTGTGATGACGTGTGCCTGCGCGGATGTGCTCTGCAC GGTGCTGATATTCAGATAGG
Product: ABC-2 type transporter
Products: NA
Alternate protein names: ABC Transporter Permease; ABC Transporter; Abc Transporter Permease Protein; ABC-Type Transport System Permease Component; ABC Transporter Membrane-Spanning Subunit
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MLRWEPIKVIIAKEWLELRRSRGLLLSMLLPPIFLPLFALGLIFVMGLVSDPDTADIPAAAVDPALANLGLEALAQVIFG RQFSTLFLLLPMIIPNVLASYSIVGEKNRRTLEPLLAAPIKVSELLLGKVLAAIIPGIVLTWGCAIVFAVGLAIVVVDPQ VPALVLQPGWVATLLLSSPLLAIISVALTVMISSRVNDPRSAQQIAGVLIVPVMLLFFGQMLGLFVLNVVVALIFALVLA LIAAGLIWLATNVFQREEILTRWR
Sequences:
>Translated_264_residues MLRWEPIKVIIAKEWLELRRSRGLLLSMLLPPIFLPLFALGLIFVMGLVSDPDTADIPAAAVDPALANLGLEALAQVIFG RQFSTLFLLLPMIIPNVLASYSIVGEKNRRTLEPLLAAPIKVSELLLGKVLAAIIPGIVLTWGCAIVFAVGLAIVVVDPQ VPALVLQPGWVATLLLSSPLLAIISVALTVMISSRVNDPRSAQQIAGVLIVPVMLLFFGQMLGLFVLNVVVALIFALVLA LIAAGLIWLATNVFQREEILTRWR >Mature_264_residues MLRWEPIKVIIAKEWLELRRSRGLLLSMLLPPIFLPLFALGLIFVMGLVSDPDTADIPAAAVDPALANLGLEALAQVIFG RQFSTLFLLLPMIIPNVLASYSIVGEKNRRTLEPLLAAPIKVSELLLGKVLAAIIPGIVLTWGCAIVFAVGLAIVVVDPQ VPALVLQPGWVATLLLSSPLLAIISVALTVMISSRVNDPRSAQQIAGVLIVPVMLLFFGQMLGLFVLNVVVALIFALVLA LIAAGLIWLATNVFQREEILTRWR
Specific function: Unknown
COG id: COG1668
COG function: function code CP; ABC-type Na+ efflux pump, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28528; Mature: 28528
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRWEPIKVIIAKEWLELRRSRGLLLSMLLPPIFLPLFALGLIFVMGLVSDPDTADIPAA CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH AVDPALANLGLEALAQVIFGRQFSTLFLLLPMIIPNVLASYSIVGEKNRRTLEPLLAAPI HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCH KVSELLLGKVLAAIIPGIVLTWGCAIVFAVGLAIVVVDPQVPALVLQPGWVATLLLSSPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHHHCHH LAIISVALTVMISSRVNDPRSAQQIAGVLIVPVMLLFFGQMLGLFVLNVVVALIFALVLA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIAAGLIWLATNVFQREEILTRWR HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLRWEPIKVIIAKEWLELRRSRGLLLSMLLPPIFLPLFALGLIFVMGLVSDPDTADIPAA CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH AVDPALANLGLEALAQVIFGRQFSTLFLLLPMIIPNVLASYSIVGEKNRRTLEPLLAAPI HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCH KVSELLLGKVLAAIIPGIVLTWGCAIVFAVGLAIVVVDPQVPALVLQPGWVATLLLSSPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHHHCHH LAIISVALTVMISSRVNDPRSAQQIAGVLIVPVMLLFFGQMLGLFVLNVVVALIFALVLA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIAAGLIWLATNVFQREEILTRWR HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA