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The map label for this gene is pdtaS [H]

Identifier: 222523582

GI number: 222523582

Start: 347992

End: 349971

Strand: Reverse

Name: pdtaS [H]

Synonym: Chy400_0288

Alternate gene names: 222523582

Gene position: 349971-347992 (Counterclockwise)

Preceding gene: 222523583

Following gene: 222523581

Centisome position: 6.64

GC content: 55.4

Gene sequence:

>1980_bases
ATGTATGAGGTGCTTACGTCACAACCACCCGATCTGGTTGGTGTACTGCGCGAGACGATCCCATCCATCGGGATGTTGAT
CGATGCGCTTGAGCAGCAGTCTGACCCGACGCTGCGGCTGAGCCTGTTGCGGCAGATTGGTGCCGAGTGGTATGCCTGCG
GTGGAATGGCTGAAGTGTTAACCGAGTTGGGTCTGCATCTTGCGGCCCGGCTACCAATGGCGCAGGGCATTGTCGTTAGT
GAATTACTGCTGGCGTTTGGTGCGGCCCAGGAAGAGCAGCGCACACGCGAATGGGAGGCTCGTTTAGTTGCACGGGCAAC
GCAGCTTGATGGTCTGCACCGGATTATTTCGGCGGCCAATTCTACGCTTGATCTTGATACTTCACTTCAGACGGTAGTCG
AAACTGTTGCGCAGGTGATGAATGTTGAAGCCTGCTCGATCTACCTCTACGATAAGCATCGCGATGATCTGGTACTGCGG
GCAACCCACGGTTTGAACCGGGCTGCCATTGGTCAGGTGGTGGCCCGGCTTGGCGAAGGAGTTACCGGTTGGGCGGCCCA
ACTGGGTTATCCGGTGGCAGTGAGTGATGTCTACAAAGACCCGCGCTATCATCGCGAACCCCAGCTCGGTGAAGAGATGT
TTCGCTCGATGCTGGCCGTGCCGATTGTGCTCTTCTCGGCGGAACGGTTTCAGTTCAGCGCCGACAAATTGCAGGGTGTG
ATTAATGTGCAGACAATCGCACCACGCGAGTTCACGCAAGAGGAGATTTCTTTCGTTGAGACGGCTGCCGGTGAGCTGGC
CTTCTTCATCGCGAATGCCCAGCTCTATCAGCAGACCGATGAGCGGTTGCACCAGAAATTGCGTGAATTGACCACCCTGC
AACAGGTGTCAAAACTGATTGCCGAGCAGATCGGCCTCCATGATGTGCTCAATCTGATCGTCGAGAAGGCTGTTCACCTC
TCAAAAGTGGATCGGGCTGCTATCTTTCAGATGGGGGAAGATGGTCAGCTCAAGCTGGTTGCCAGTTATGGTGGTGAAGG
CGATGGCGTGCGCGACCTGGTTATTCAGACGGTACGCGATGGTCGCCCTCTGGCAGTTATGAATGCTTACCAGGATGCCC
GGTTTCCGCAGTTGCCGGCAGTGGCACGGGCAGAGAATTTTCATTCCCTCTTTTGCATGCCGTTGCGTGCGCGTGGTCGC
ACCATCGGCGGTATTTGTCTCTACCGTCGTGAACCGCATCTGTTCGATTATGAACAGGTACGGCTGCTCAATACCTTTGC
CGACGAAGCGGCCATCGCGATTGAAAACGCACGCCTCTATGAAGAGAGTTTGCGTGCTTTGCGGATCAAGTCGGCTTTGT
TGCAAGAGATGCATCACCGCGTGCGCAACAATCTGCAAACCATTGCGGCATTACTGTCAATGCAACTGCGACGGCTCGAT
CCGGCCAGCCCCGGTGCGAAGGCGTTACGCGAGAGTGCAGCGCGTATTCAGGCCATTGCTGCTATTCATAACCTGCTCTC
GCGCGACGATATTGGGGTGACGACCGTTGGCGCAGTGGCGCGCCAGGTCATCGAGAGTGTGCAAAGTACCCTCTTCGAGA
GCGATATTCGGGTTGATTTTGCTATTCTCGGTGATGAGGTACGGATCGGTTCACGTGATGCAACCGTGCTGGCACTGGTG
ATTAATGAGCTGGTTGATAATGCCTTGACCCACGGCCTGGCCGTTGAAGGTGGACGGATTGAGGTTGAAGCTGTGCTTGA
ACACGGTCAGGTGCTGGTCGAGCTGCGCGATGATGGCCCTCGTCATCCGCCACCGCCGTCACGCCACAGTAGCGGATTGG
GATTGCAAATTATTGAAACACTGGTCAATAGCGACCTGAATGGCTCGTTTTCGTTAATTCGCGATGAAGAAGCCGGTTGG
ATGCGGGCCCGTATTCGCTTTCCACAGCGCATCATTGATGAAGATCGCATTGAAGTCTAA

Upstream 100 bases:

>100_bases
AGGAGCCAACCCGAAAAACCCTACCCGGCCAGTAGTCCTGCGTGGATTATTCGGGTAGGCTCTCAAGGAGCGGTCTATGA
AGGATGCGACGGTCAGATCT

Downstream 100 bases:

>100_bases
GCATACTGCATGACATTTCTGGAGGGATTGTGGACATCACACTTTGGGCATGGATTGGCTTCCATGCAATCGTTTTTCTG
GTTTTGGCCCTTGACCTGGG

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 659; Mature: 659

Protein sequence:

>659_residues
MYEVLTSQPPDLVGVLRETIPSIGMLIDALEQQSDPTLRLSLLRQIGAEWYACGGMAEVLTELGLHLAARLPMAQGIVVS
ELLLAFGAAQEEQRTREWEARLVARATQLDGLHRIISAANSTLDLDTSLQTVVETVAQVMNVEACSIYLYDKHRDDLVLR
ATHGLNRAAIGQVVARLGEGVTGWAAQLGYPVAVSDVYKDPRYHREPQLGEEMFRSMLAVPIVLFSAERFQFSADKLQGV
INVQTIAPREFTQEEISFVETAAGELAFFIANAQLYQQTDERLHQKLRELTTLQQVSKLIAEQIGLHDVLNLIVEKAVHL
SKVDRAAIFQMGEDGQLKLVASYGGEGDGVRDLVIQTVRDGRPLAVMNAYQDARFPQLPAVARAENFHSLFCMPLRARGR
TIGGICLYRREPHLFDYEQVRLLNTFADEAAIAIENARLYEESLRALRIKSALLQEMHHRVRNNLQTIAALLSMQLRRLD
PASPGAKALRESAARIQAIAAIHNLLSRDDIGVTTVGAVARQVIESVQSTLFESDIRVDFAILGDEVRIGSRDATVLALV
INELVDNALTHGLAVEGGRIEVEAVLEHGQVLVELRDDGPRHPPPPSRHSSGLGLQIIETLVNSDLNGSFSLIRDEEAGW
MRARIRFPQRIIDEDRIEV

Sequences:

>Translated_659_residues
MYEVLTSQPPDLVGVLRETIPSIGMLIDALEQQSDPTLRLSLLRQIGAEWYACGGMAEVLTELGLHLAARLPMAQGIVVS
ELLLAFGAAQEEQRTREWEARLVARATQLDGLHRIISAANSTLDLDTSLQTVVETVAQVMNVEACSIYLYDKHRDDLVLR
ATHGLNRAAIGQVVARLGEGVTGWAAQLGYPVAVSDVYKDPRYHREPQLGEEMFRSMLAVPIVLFSAERFQFSADKLQGV
INVQTIAPREFTQEEISFVETAAGELAFFIANAQLYQQTDERLHQKLRELTTLQQVSKLIAEQIGLHDVLNLIVEKAVHL
SKVDRAAIFQMGEDGQLKLVASYGGEGDGVRDLVIQTVRDGRPLAVMNAYQDARFPQLPAVARAENFHSLFCMPLRARGR
TIGGICLYRREPHLFDYEQVRLLNTFADEAAIAIENARLYEESLRALRIKSALLQEMHHRVRNNLQTIAALLSMQLRRLD
PASPGAKALRESAARIQAIAAIHNLLSRDDIGVTTVGAVARQVIESVQSTLFESDIRVDFAILGDEVRIGSRDATVLALV
INELVDNALTHGLAVEGGRIEVEAVLEHGQVLVELRDDGPRHPPPPSRHSSGLGLQIIETLVNSDLNGSFSLIRDEEAGW
MRARIRFPQRIIDEDRIEV
>Mature_659_residues
MYEVLTSQPPDLVGVLRETIPSIGMLIDALEQQSDPTLRLSLLRQIGAEWYACGGMAEVLTELGLHLAARLPMAQGIVVS
ELLLAFGAAQEEQRTREWEARLVARATQLDGLHRIISAANSTLDLDTSLQTVVETVAQVMNVEACSIYLYDKHRDDLVLR
ATHGLNRAAIGQVVARLGEGVTGWAAQLGYPVAVSDVYKDPRYHREPQLGEEMFRSMLAVPIVLFSAERFQFSADKLQGV
INVQTIAPREFTQEEISFVETAAGELAFFIANAQLYQQTDERLHQKLRELTTLQQVSKLIAEQIGLHDVLNLIVEKAVHL
SKVDRAAIFQMGEDGQLKLVASYGGEGDGVRDLVIQTVRDGRPLAVMNAYQDARFPQLPAVARAENFHSLFCMPLRARGR
TIGGICLYRREPHLFDYEQVRLLNTFADEAAIAIENARLYEESLRALRIKSALLQEMHHRVRNNLQTIAALLSMQLRRLD
PASPGAKALRESAARIQAIAAIHNLLSRDDIGVTTVGAVARQVIESVQSTLFESDIRVDFAILGDEVRIGSRDATVLALV
INELVDNALTHGLAVEGGRIEVEAVLEHGQVLVELRDDGPRHPPPPSRHSSGLGLQIIETLVNSDLNGSFSLIRDEEAGW
MRARIRFPQRIIDEDRIEV

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789193, Length=218, Percent_Identity=30.2752293577982, Blast_Score=87, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 73048; Mature: 73048

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEVLTSQPPDLVGVLRETIPSIGMLIDALEQQSDPTLRLSLLRQIGAEWYACGGMAEVL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCHHHHH
TELGLHLAARLPMAQGIVVSELLLAFGAAQEEQRTREWEARLVARATQLDGLHRIISAAN
HHHHHHHHHHCCHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
STLDLDTSLQTVVETVAQVMNVEACSIYLYDKHRDDLVLRATHGLNRAAIGQVVARLGEG
CCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCC
VTGWAAQLGYPVAVSDVYKDPRYHREPQLGEEMFRSMLAVPIVLFSAERFQFSADKLQGV
CCHHHHHCCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCE
INVQTIAPREFTQEEISFVETAAGELAFFIANAQLYQQTDERLHQKLRELTTLQQVSKLI
EEEEEECCHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEQIGLHDVLNLIVEKAVHLSKVDRAAIFQMGEDGQLKLVASYGGEGDGVRDLVIQTVRD
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCC
GRPLAVMNAYQDARFPQLPAVARAENFHSLFCMPLRARGRTIGGICLYRREPHLFDYEQV
CCCEEEEEHHHHCCCCCCCHHHHHCCCHHEEEEEHHHCCCEECCEEEEECCCCCCCHHHH
RLLNTFADEAAIAIENARLYEESLRALRIKSALLQEMHHRVRNNLQTIAALLSMQLRRLD
HHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PASPGAKALRESAARIQAIAAIHNLLSRDDIGVTTVGAVARQVIESVQSTLFESDIRVDF
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
AILGDEVRIGSRDATVLALVINELVDNALTHGLAVEGGRIEVEAVLEHGQVLVELRDDGP
EEECCEEEECCCCHHHHHHHHHHHHHHHHHCCEEECCCEEEHHHHHHCCEEEEEECCCCC
RHPPPPSRHSSGLGLQIIETLVNSDLNGSFSLIRDEEAGWMRARIRFPQRIIDEDRIEV
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCHHHHCCCCCCC
>Mature Secondary Structure
MYEVLTSQPPDLVGVLRETIPSIGMLIDALEQQSDPTLRLSLLRQIGAEWYACGGMAEVL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCHHHHH
TELGLHLAARLPMAQGIVVSELLLAFGAAQEEQRTREWEARLVARATQLDGLHRIISAAN
HHHHHHHHHHCCHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
STLDLDTSLQTVVETVAQVMNVEACSIYLYDKHRDDLVLRATHGLNRAAIGQVVARLGEG
CCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCC
VTGWAAQLGYPVAVSDVYKDPRYHREPQLGEEMFRSMLAVPIVLFSAERFQFSADKLQGV
CCHHHHHCCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCE
INVQTIAPREFTQEEISFVETAAGELAFFIANAQLYQQTDERLHQKLRELTTLQQVSKLI
EEEEEECCHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEQIGLHDVLNLIVEKAVHLSKVDRAAIFQMGEDGQLKLVASYGGEGDGVRDLVIQTVRD
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCC
GRPLAVMNAYQDARFPQLPAVARAENFHSLFCMPLRARGRTIGGICLYRREPHLFDYEQV
CCCEEEEEHHHHCCCCCCCHHHHHCCCHHEEEEEHHHCCCEECCEEEEECCCCCCCHHHH
RLLNTFADEAAIAIENARLYEESLRALRIKSALLQEMHHRVRNNLQTIAALLSMQLRRLD
HHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PASPGAKALRESAARIQAIAAIHNLLSRDDIGVTTVGAVARQVIESVQSTLFESDIRVDF
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
AILGDEVRIGSRDATVLALVINELVDNALTHGLAVEGGRIEVEAVLEHGQVLVELRDDGP
EEECCEEEECCCCHHHHHHHHHHHHHHHHHCCEEECCCEEEHHHHHHCCEEEEEECCCCC
RHPPPPSRHSSGLGLQIIETLVNSDLNGSFSLIRDEEAGWMRARIRFPQRIIDEDRIEV
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]