| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523493
Identifier: 222523493
GI number: 222523493
Start: 235887
End: 237302
Strand: Reverse
Name: 222523493
Synonym: Chy400_0199
Alternate gene names: NA
Gene position: 237302-235887 (Counterclockwise)
Preceding gene: 222523494
Following gene: 222523492
Centisome position: 4.5
GC content: 58.97
Gene sequence:
>1416_bases ATGATGTTGCGTATTGCCTACTGTTCACCGGTCAATCCGGCTCCTTCAGGCATCTCCGATTACAGTGAGGAGCTGCTGCC GTATCTTGCACAGTATGCTGCACTGACGCTCTTCGTTGAAGATGGTTTACGGCCAACCAATCCTCATCTGGCGAAACACT TCCCGATTAAGCCGATTCGCCAGCTTGAACGCATGGCCCGGCGTGGACAGTTCGATGCGATTATCTATCACATGGGCAAC AGCCCGGCCCACGCCGGTATCTGGCGGATGGCACAGCGTGTACCCGGCGTGATTGTGTTGCACGATTTTGTGCTCCATCA CTTCATGCTCTGGTATGCGGCCAACGTTCAGCGCGATGTCCAGCGCTATGTAGCCATGATGCGTGCACGCTACGGTGCCG ACGGTGACCATATGGCGCAACTGATGATCCGTTCGCGCTTCAGCGAAGCTGCGTTTGCTTTTCCCTGCAACGAAGACGTG TTAGCGGCAGCCAAAGCGGTGATCGGTCATAGCCATTACCTGTTGCGGCGTGTGACCGCAACCCGTCCAGACCTGCTCTG TGGTTACGTGCCGATGGGGGTGCCACTGCCACCGTTGATCGACCGGATTGCTGCGCGGCAGCGACTCGGTTTACCACTCG ATCAACCGCTACTGGCCAGCTTTGGCCATATCAACGCCTGGAAGCGGATCGAACCAACCCTGCGCGCCGTGGCCGGGTTG CGTCGTGAAGGCATCGATGTGCATTGTCTGCTGGTTGGCTCGGTGTCGCCAAATTATGACCTCAAAGGCGTTATCCAGCG TCTCGGCCTGCAAGAGGCGGTGACCGTCACCGGCTATGTTGCGCGGGCTCAATTTGAGGATTACGTGGCTGCTACCGATG TCTGCCTGAATTTACGTTATCCCACTGCCGGCGAAACCAGTGCCAGCCTGCTTCGCCTGCTCGGTGCAGGGAAGCCAACC CTGGTAAGCGCCGTGGATGCGTTTTGCGAATTGCCCCCCGATGTAGCGGCGCAGGTTGATGTTGACGAGAGTGAAACCGA CCTCATTATCGCCTATTGTCGGCGTCTGCTCACCGATCCGGCGCTGGCAGCCGCACTGGGGGCACGGGCGCGGGCTTACG TCGCTACCGAACATACGCTGGCCGGTGCAGCACAGGCGATGATCGAGTTTCTGGCGAAGGTGTATGGCTGGGCGCCACCA CAGCGCATTCGCCCTGATCCGCTTTGGGATCCGACACCGGTGGTTGAAGCAGAGACAACACCGTCGCCCCCATCACCCCA ACCTGCCGCACCGGCGTCATTGCTGTTGCAGACAGCGGCTCAGGCGATGGCCGAGATCGGGTTGACTGAAGATGATACCG GCGCTTTGCAATCGGTGGCAACGAAGATTGCCGAGTTGCAGGGGAAGCATCCGTAA
Upstream 100 bases:
>100_bases ATGAAGCCGCATTCCGTGATGGTCATCTGGTATGGGGGCGGGTTGTCGCCGATATTCCGGTCTTCTGTCGCGAGCTGGTG GCGGCATTGGTGGAACGAGC
Downstream 100 bases:
>100_bases CGAGCCATGTGTGGTTGGTCTGATGACCGACTCGGTACAGGAGATAGCTTCATGCGGGTTGTGATTCGAGAGGTTTTGAA TGTCGGCGGCTTCTTTGCCG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Mannosyltransferase A; Glycosyl Transferase; Mannosyltransferase
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MMLRIAYCSPVNPAPSGISDYSEELLPYLAQYAALTLFVEDGLRPTNPHLAKHFPIKPIRQLERMARRGQFDAIIYHMGN SPAHAGIWRMAQRVPGVIVLHDFVLHHFMLWYAANVQRDVQRYVAMMRARYGADGDHMAQLMIRSRFSEAAFAFPCNEDV LAAAKAVIGHSHYLLRRVTATRPDLLCGYVPMGVPLPPLIDRIAARQRLGLPLDQPLLASFGHINAWKRIEPTLRAVAGL RREGIDVHCLLVGSVSPNYDLKGVIQRLGLQEAVTVTGYVARAQFEDYVAATDVCLNLRYPTAGETSASLLRLLGAGKPT LVSAVDAFCELPPDVAAQVDVDESETDLIIAYCRRLLTDPALAAALGARARAYVATEHTLAGAAQAMIEFLAKVYGWAPP QRIRPDPLWDPTPVVEAETTPSPPSPQPAAPASLLLQTAAQAMAEIGLTEDDTGALQSVATKIAELQGKHP
Sequences:
>Translated_471_residues MMLRIAYCSPVNPAPSGISDYSEELLPYLAQYAALTLFVEDGLRPTNPHLAKHFPIKPIRQLERMARRGQFDAIIYHMGN SPAHAGIWRMAQRVPGVIVLHDFVLHHFMLWYAANVQRDVQRYVAMMRARYGADGDHMAQLMIRSRFSEAAFAFPCNEDV LAAAKAVIGHSHYLLRRVTATRPDLLCGYVPMGVPLPPLIDRIAARQRLGLPLDQPLLASFGHINAWKRIEPTLRAVAGL RREGIDVHCLLVGSVSPNYDLKGVIQRLGLQEAVTVTGYVARAQFEDYVAATDVCLNLRYPTAGETSASLLRLLGAGKPT LVSAVDAFCELPPDVAAQVDVDESETDLIIAYCRRLLTDPALAAALGARARAYVATEHTLAGAAQAMIEFLAKVYGWAPP QRIRPDPLWDPTPVVEAETTPSPPSPQPAAPASLLLQTAAQAMAEIGLTEDDTGALQSVATKIAELQGKHP >Mature_471_residues MMLRIAYCSPVNPAPSGISDYSEELLPYLAQYAALTLFVEDGLRPTNPHLAKHFPIKPIRQLERMARRGQFDAIIYHMGN SPAHAGIWRMAQRVPGVIVLHDFVLHHFMLWYAANVQRDVQRYVAMMRARYGADGDHMAQLMIRSRFSEAAFAFPCNEDV LAAAKAVIGHSHYLLRRVTATRPDLLCGYVPMGVPLPPLIDRIAARQRLGLPLDQPLLASFGHINAWKRIEPTLRAVAGL RREGIDVHCLLVGSVSPNYDLKGVIQRLGLQEAVTVTGYVARAQFEDYVAATDVCLNLRYPTAGETSASLLRLLGAGKPT LVSAVDAFCELPPDVAAQVDVDESETDLIIAYCRRLLTDPALAAALGARARAYVATEHTLAGAAQAMIEFLAKVYGWAPP QRIRPDPLWDPTPVVEAETTPSPPSPQPAAPASLLLQTAAQAMAEIGLTEDDTGALQSVATKIAELQGKHP
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51407; Mature: 51407
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLRIAYCSPVNPAPSGISDYSEELLPYLAQYAALTLFVEDGLRPTNPHLAKHFPIKPIR CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHH QLERMARRGQFDAIIYHMGNSPAHAGIWRMAQRVPGVIVLHDFVLHHFMLWYAANVQRDV HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHH QRYVAMMRARYGADGDHMAQLMIRSRFSEAAFAFPCNEDVLAAAKAVIGHSHYLLRRVTA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHC TRPDLLCGYVPMGVPLPPLIDRIAARQRLGLPLDQPLLASFGHINAWKRIEPTLRAVAGL CCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHH RREGIDVHCLLVGSVSPNYDLKGVIQRLGLQEAVTVTGYVARAQFEDYVAATDVCLNLRY HHCCCEEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC PTAGETSASLLRLLGAGKPTLVSAVDAFCELPPDVAAQVDVDESETDLIIAYCRRLLTDP CCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCH ALAAALGARARAYVATEHTLAGAAQAMIEFLAKVYGWAPPQRIRPDPLWDPTPVVEAETT HHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCC PSPPSPQPAAPASLLLQTAAQAMAEIGLTEDDTGALQSVATKIAELQGKHP CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMLRIAYCSPVNPAPSGISDYSEELLPYLAQYAALTLFVEDGLRPTNPHLAKHFPIKPIR CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHH QLERMARRGQFDAIIYHMGNSPAHAGIWRMAQRVPGVIVLHDFVLHHFMLWYAANVQRDV HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHH QRYVAMMRARYGADGDHMAQLMIRSRFSEAAFAFPCNEDVLAAAKAVIGHSHYLLRRVTA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHC TRPDLLCGYVPMGVPLPPLIDRIAARQRLGLPLDQPLLASFGHINAWKRIEPTLRAVAGL CCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHH RREGIDVHCLLVGSVSPNYDLKGVIQRLGLQEAVTVTGYVARAQFEDYVAATDVCLNLRY HHCCCEEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC PTAGETSASLLRLLGAGKPTLVSAVDAFCELPPDVAAQVDVDESETDLIIAYCRRLLTDP CCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCH ALAAALGARARAYVATEHTLAGAAQAMIEFLAKVYGWAPPQRIRPDPLWDPTPVVEAETT HHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCC PSPPSPQPAAPASLLLQTAAQAMAEIGLTEDDTGALQSVATKIAELQGKHP CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA