| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is acoC [H]
Identifier: 222523458
GI number: 222523458
Start: 190618
End: 191514
Strand: Reverse
Name: acoC [H]
Synonym: Chy400_0163
Alternate gene names: 222523458
Gene position: 191514-190618 (Counterclockwise)
Preceding gene: 222523459
Following gene: 222523457
Centisome position: 3.63
GC content: 57.19
Gene sequence:
>897_bases ATGTCAACCCCAACCGAAATCAATACCACCCGCAAATTTGAGATTCGGGAGGAGTACCGCAGTGGCCCTGATGGCTTAAT GCGGGTCTGGATGTCCTCACCCGTCCAGGGCTTGCCGGTGCTCTTGATCCACGGGTATGGTGCCCTCATCGAACACTGGC GTCCGGTGATGAGAGCAATTGCCGGTGAACAGACGTTATACGCTCTCGATCTCTACTATTTCGGTTACTCGGCGCGGCCT GCCGGTCGGCCCAGTCGCGAACGGTGGGCAGCCCAGGCCGCAGCATTGATCCGCAATACGATTGGTCGTCCGGCGGTGGT GGTTGGTCATTCGATGGGAGGTGTGGTCAGCGCGCAACTGGCGCGTGCCTACCCTGATCTGGTACATGCCCTGGTTCTGG TCAACAGCTCAGGAGCACAGTTACAGGCACGGCCACTCAGCACCTTTGATCGTTTCATGCTCGATGCCATAGGTTCACCG CTGATTGGCGAGGCACTGGCCGGCGTATTCGGCAATCGCTGGGGGGTACGGCAGGGGTTGTTGTCGGCGTACCATCGCAA AGAATGTGTCACCCCGGAGCTGGTTGAGCTATTTAGTGGCCCGCTTCGCCGTTATGGTGCAGGTTCATACCTGAAAGTCA GCCGTGAATTTGCCAATCTAGTCCTCGACCTTACGCCCGGCGAAATTAAACAACCCACGCTCCTCATCTGGGGAGCCGAA GATCGCTCGATTCCACCCGCCCATGCCGAAATTATCAGGCAACGGATGATCCCACACGCCGAGATCAAAATCATCCCCGA CAGCGGTCATTGTCCGTTCGATGAGACACCGGCTGCATTTCTCGATATTCTCTTGCCGTGGTTGCGTAAAGTTGGTGAGC AGACTGTGGTGGCTTAG
Upstream 100 bases:
>100_bases GGCAAAATCTGTGCATAGTATTTGCAAACGTGGTATCCTGATAACAGGTATACCACGTTTGTTGCTTTAAGTGACCCAAA CTAGATTGAGGATATAGATC
Downstream 100 bases:
>100_bases TACCGCCGCCGGGTAGCCCCGCCGGGTCAGGTGGGCTAAAGCCATCCCTGACAGCATGTAAGCCCCGTTGGGGCTGGAGG CACCCACACCCCGCCGCCAG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Acetoin dehydrogenase E2 component; Dihydrolipoamide acetyltransferase component of acetoin cleaving system [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSTPTEINTTRKFEIREEYRSGPDGLMRVWMSSPVQGLPVLLIHGYGALIEHWRPVMRAIAGEQTLYALDLYYFGYSARP AGRPSRERWAAQAAALIRNTIGRPAVVVGHSMGGVVSAQLARAYPDLVHALVLVNSSGAQLQARPLSTFDRFMLDAIGSP LIGEALAGVFGNRWGVRQGLLSAYHRKECVTPELVELFSGPLRRYGAGSYLKVSREFANLVLDLTPGEIKQPTLLIWGAE DRSIPPAHAEIIRQRMIPHAEIKIIPDSGHCPFDETPAAFLDILLPWLRKVGEQTVVA
Sequences:
>Translated_298_residues MSTPTEINTTRKFEIREEYRSGPDGLMRVWMSSPVQGLPVLLIHGYGALIEHWRPVMRAIAGEQTLYALDLYYFGYSARP AGRPSRERWAAQAAALIRNTIGRPAVVVGHSMGGVVSAQLARAYPDLVHALVLVNSSGAQLQARPLSTFDRFMLDAIGSP LIGEALAGVFGNRWGVRQGLLSAYHRKECVTPELVELFSGPLRRYGAGSYLKVSREFANLVLDLTPGEIKQPTLLIWGAE DRSIPPAHAEIIRQRMIPHAEIKIIPDSGHCPFDETPAAFLDILLPWLRKVGEQTVVA >Mature_297_residues STPTEINTTRKFEIREEYRSGPDGLMRVWMSSPVQGLPVLLIHGYGALIEHWRPVMRAIAGEQTLYALDLYYFGYSARPA GRPSRERWAAQAAALIRNTIGRPAVVVGHSMGGVVSAQLARAYPDLVHALVLVNSSGAQLQARPLSTFDRFMLDAIGSPL IGEALAGVFGNRWGVRQGLLSAYHRKECVTPELVELFSGPLRRYGAGSYLKVSREFANLVLDLTPGEIKQPTLLIWGAED RSIPPAHAEIIRQRMIPHAEIKIIPDSGHCPFDETPAAFLDILLPWLRKVGEQTVVA
Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 lipoyl-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003016 - InterPro: IPR000073 - InterPro: IPR000089 - InterPro: IPR011053 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF00364 Biotin_lipoyl [H]
EC number: =2.3.1.12 [H]
Molecular weight: Translated: 32884; Mature: 32753
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPTEINTTRKFEIREEYRSGPDGLMRVWMSSPVQGLPVLLIHGYGALIEHWRPVMRAI CCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHH AGEQTLYALDLYYFGYSARPAGRPSRERWAAQAAALIRNTIGRPAVVVGHSMGGVVSAQL CCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH ARAYPDLVHALVLVNSSGAQLQARPLSTFDRFMLDAIGSPLIGEALAGVFGNRWGVRQGL HHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHH LSAYHRKECVTPELVELFSGPLRRYGAGSYLKVSREFANLVLDLTPGEIKQPTLLIWGAE HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCCCCEEEEECCC DRSIPPAHAEIIRQRMIPHAEIKIIPDSGHCPFDETPAAFLDILLPWLRKVGEQTVVA CCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure STPTEINTTRKFEIREEYRSGPDGLMRVWMSSPVQGLPVLLIHGYGALIEHWRPVMRAI CCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHH AGEQTLYALDLYYFGYSARPAGRPSRERWAAQAAALIRNTIGRPAVVVGHSMGGVVSAQL CCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH ARAYPDLVHALVLVNSSGAQLQARPLSTFDRFMLDAIGSPLIGEALAGVFGNRWGVRQGL HHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHH LSAYHRKECVTPELVELFSGPLRRYGAGSYLKVSREFANLVLDLTPGEIKQPTLLIWGAE HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCCCCEEEEECCC DRSIPPAHAEIIRQRMIPHAEIKIIPDSGHCPFDETPAAFLDILLPWLRKVGEQTVVA CCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7813883 [H]