| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523402
Identifier: 222523402
GI number: 222523402
Start: 131185
End: 131823
Strand: Reverse
Name: 222523402
Synonym: Chy400_0104
Alternate gene names: NA
Gene position: 131823-131185 (Counterclockwise)
Preceding gene: 222523403
Following gene: 222523396
Centisome position: 2.5
GC content: 57.75
Gene sequence:
>639_bases ATGCGTCAGGTTCGTCAACTTATTGATTGGATATACGCCCTGATAACCGGCCATCCCCTGCTTTTTTGGGCGTGTATGCT GATAAATCTGTTTGGGGTGGTCTGGGGTGGTATTGTCTGGTATGGGCCAATGCTGGCTTCTTCACCGGCCTGGGCCTGGA TTTTTATTCCCGATTGTCCGGCAGCGGCCCTCTACGCGACGATTGCGTTTATTTTGCTCCGCTATGGGCGGCAGGTGCCC TGGTTTACTGCGTTCGCTGCGTTTGCCTGTATCAAATACGGTTTGTGGACGCTGGCCTTCTGGACGCGGCACTGGCTTGG TGCAGGTACGGTCGAGCCGCTGGAGTTGATGCTGTTCGTTTCGCATATCGGCTTGACCTGCGAAGGTGTGTTGCTGGCGA CACGGATCGGCCCGCTTGGTATGACGGCACGGGCAGCGGTTGCGGCCTTTTTCAGTCTGTCGATCCTGGTGGATTACGGG CTTGGTTTCCATCCGCCGTTGACCTGGGTGGTAACGCCAACCTTTGCGCTGTGGACGGCGGTGATCCTGACCAGTGTTTT AGGGTTCTGGCTGACTCGGCCATCGCTGGTAGTGGCCCAGCGTGCCGAAGCGTTGGGGTTGCAGGTGCCGCGGGAATGA
Upstream 100 bases:
>100_bases GGGGCGTTCGTGGGTGGCGTGCCAATTCGCCGTCTCGACCGCTAATGGAATGACCAACGGGTTTTCGTTGCAATGAACAG TAACCGCCAGCGAGGTTGTT
Downstream 100 bases:
>100_bases GTGGTTGTGGATGGGCAGATTTGATAGCTGGTATTGTTAGGACGCCCTCATCTCCGGCTCCTTGCCCGCGCATCAGGCTA TGCATTACCCACATATAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MRQVRQLIDWIYALITGHPLLFWACMLINLFGVVWGGIVWYGPMLASSPAWAWIFIPDCPAAALYATIAFILLRYGRQVP WFTAFAAFACIKYGLWTLAFWTRHWLGAGTVEPLELMLFVSHIGLTCEGVLLATRIGPLGMTARAAVAAFFSLSILVDYG LGFHPPLTWVVTPTFALWTAVILTSVLGFWLTRPSLVVAQRAEALGLQVPRE
Sequences:
>Translated_212_residues MRQVRQLIDWIYALITGHPLLFWACMLINLFGVVWGGIVWYGPMLASSPAWAWIFIPDCPAAALYATIAFILLRYGRQVP WFTAFAAFACIKYGLWTLAFWTRHWLGAGTVEPLELMLFVSHIGLTCEGVLLATRIGPLGMTARAAVAAFFSLSILVDYG LGFHPPLTWVVTPTFALWTAVILTSVLGFWLTRPSLVVAQRAEALGLQVPRE >Mature_212_residues MRQVRQLIDWIYALITGHPLLFWACMLINLFGVVWGGIVWYGPMLASSPAWAWIFIPDCPAAALYATIAFILLRYGRQVP WFTAFAAFACIKYGLWTLAFWTRHWLGAGTVEPLELMLFVSHIGLTCEGVLLATRIGPLGMTARAAVAAFFSLSILVDYG LGFHPPLTWVVTPTFALWTAVILTSVLGFWLTRPSLVVAQRAEALGLQVPRE
Specific function: Unknown
COG id: COG4347
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23586; Mature: 23586
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQVRQLIDWIYALITGHPLLFWACMLINLFGVVWGGIVWYGPMLASSPAWAWIFIPDCP CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC AAALYATIAFILLRYGRQVPWFTAFAAFACIKYGLWTLAFWTRHWLGAGTVEPLELMLFV HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SHIGLTCEGVLLATRIGPLGMTARAAVAAFFSLSILVDYGLGFHPPLTWVVTPTFALWTA HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEECHHHHHHHH VILTSVLGFWLTRPSLVVAQRAEALGLQVPRE HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRQVRQLIDWIYALITGHPLLFWACMLINLFGVVWGGIVWYGPMLASSPAWAWIFIPDCP CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC AAALYATIAFILLRYGRQVPWFTAFAAFACIKYGLWTLAFWTRHWLGAGTVEPLELMLFV HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SHIGLTCEGVLLATRIGPLGMTARAAVAAFFSLSILVDYGLGFHPPLTWVVTPTFALWTA HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEECHHHHHHHH VILTSVLGFWLTRPSLVVAQRAEALGLQVPRE HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA