| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523378
Identifier: 222523378
GI number: 222523378
Start: 91178
End: 92077
Strand: Direct
Name: 222523378
Synonym: Chy400_0079
Alternate gene names: NA
Gene position: 91178-92077 (Clockwise)
Preceding gene: 222523377
Following gene: 222523379
Centisome position: 1.73
GC content: 48.33
Gene sequence:
>900_bases GTGAAGCATCAGCGGACACCATCGCCAATCCTGCAGCGGAGAACGAGAAGACTCATTGCATTCGGCTGGTACGGAGGGAA ATACTCACACCTCGACTGGCTTCTCCCATTACTTCCTCCGTGTCACCATTATTGTGAACCCTTCGGAGGATCGGCTGCTG TATTGCTGAACCGAGATCCAGCACCTGTTGAGACGTACAATGATATTGACGGTGAAGTCACCAATTTTTTTCGCGTACTG CGCGATCAACCGGATCAATTAACACGAGCGATTGCACTCACTCCTTTTTCGCGGGAAGAGTTTGCTCTGGCCTGCGAAAT AGACCCCTCACTTGAACCAATTGAACGCGCGAGACGATTCTATGTGCGCGCTCGTCAGGTACGAACAGGGCTGGCTCAAT CTGCTTCACTTGGCCGATGGGCAAATTGCAAACAAACCAGTCGGTCAGGAATGGCGGGTGCAATCTCGCGCTGGTTTGGT GCAATCGAAGATCTCCCTGACATTGCCATACGCCTGTTACGTGTACAGATTGAGAATCGACCTGCGCTTGAGGTCATCCG GCTGTACGACTCACCTGACACGCTTTTCTACTGTGATCCCCCTTACGTCCATGAGACGAGAGGTGACAATAATGCATATG CCTATGAGATGAGCAACGAAGAACATCAACAACTCGCTGATGTTCTCAATTCAGTACAGGGTTTCGTTGCTATCTCTGGC TACGATTGTGATTTAATGAATGAACTTTATTCGCCTCCGAAATGGATAAAGCATGTAGGACCAACAAGAACCATACACTC GACCAAAGACCAACGAACTGAAATTCTGTGGACGAATTACGATCCAATTCTCTATCAATCTCATACATTGTTTGGAGTAG AACTTGGAAAATCCTCATGA
Upstream 100 bases:
>100_bases TTGATATAATACCATCTGGCATGAAATCAAACTTACAATACCTGACATGTTCAGCAAAAATACCCTTCCGAATTGATTCT TTATAGATACGGAGTCACAA
Downstream 100 bases:
>100_bases AATCCTAAAACGTATCCTGGAATACGTATCTGTTGATCTCTCCAGATCATCAATAACTGACCAGGAGATACGCACACGTA TAGAATCTGTGTGTCGGCAG
Product: D12 class N6 adenine-specific DNA methyltransferase
Products: NA
Alternate protein names: Methyltransferase; DNA Adenine Methylase; Adenine-Specific DNA Methyltransferase; Site-Specific DNA Methylase; N6 Adenine-Specific DNA Methyltransferase; DNA Adenine Methyltransferase; Methylase; N6 Adenine-Specific DNA Methyltransferase Protein; Phage Methylase; Type II DNA Methyltransferase; Prophage; Phage Associated Type II DNA-Methyltransferase; Prophage DNA Adenine Methylase; DNA Adenine Methylase Subfamily; Prophage DNA Methylase; LOW QUALITY PROTEIN DNA Adenine Methylase; Phage-Related Methylase; Adenine Specific DNA Methyltransferase
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKHQRTPSPILQRRTRRLIAFGWYGGKYSHLDWLLPLLPPCHHYCEPFGGSAAVLLNRDPAPVETYNDIDGEVTNFFRVL RDQPDQLTRAIALTPFSREEFALACEIDPSLEPIERARRFYVRARQVRTGLAQSASLGRWANCKQTSRSGMAGAISRWFG AIEDLPDIAIRLLRVQIENRPALEVIRLYDSPDTLFYCDPPYVHETRGDNNAYAYEMSNEEHQQLADVLNSVQGFVAISG YDCDLMNELYSPPKWIKHVGPTRTIHSTKDQRTEILWTNYDPILYQSHTLFGVELGKSS
Sequences:
>Translated_299_residues MKHQRTPSPILQRRTRRLIAFGWYGGKYSHLDWLLPLLPPCHHYCEPFGGSAAVLLNRDPAPVETYNDIDGEVTNFFRVL RDQPDQLTRAIALTPFSREEFALACEIDPSLEPIERARRFYVRARQVRTGLAQSASLGRWANCKQTSRSGMAGAISRWFG AIEDLPDIAIRLLRVQIENRPALEVIRLYDSPDTLFYCDPPYVHETRGDNNAYAYEMSNEEHQQLADVLNSVQGFVAISG YDCDLMNELYSPPKWIKHVGPTRTIHSTKDQRTEILWTNYDPILYQSHTLFGVELGKSS >Mature_299_residues MKHQRTPSPILQRRTRRLIAFGWYGGKYSHLDWLLPLLPPCHHYCEPFGGSAAVLLNRDPAPVETYNDIDGEVTNFFRVL RDQPDQLTRAIALTPFSREEFALACEIDPSLEPIERARRFYVRARQVRTGLAQSASLGRWANCKQTSRSGMAGAISRWFG AIEDLPDIAIRLLRVQIENRPALEVIRLYDSPDTLFYCDPPYVHETRGDNNAYAYEMSNEEHQQLADVLNSVQGFVAISG YDCDLMNELYSPPKWIKHVGPTRTIHSTKDQRTEILWTNYDPILYQSHTLFGVELGKSS
Specific function: Unknown
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34243; Mature: 34243
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHQRTPSPILQRRTRRLIAFGWYGGKYSHLDWLLPLLPPCHHYCEPFGGSAAVLLNRDP CCCCCCCCHHHHHHHHHEEEEEECCCCCCHHHHHHHHCCCHHHHHCCCCCCEEEEECCCC APVETYNDIDGEVTNFFRVLRDQPDQLTRAIALTPFSREEFALACEIDPSLEPIERARRF CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHEECCCCCCCEEEEEECCCCCCHHHHHHHH YVRARQVRTGLAQSASLGRWANCKQTSRSGMAGAISRWFGAIEDLPDIAIRLLRVQIENR HHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC PALEVIRLYDSPDTLFYCDPPYVHETRGDNNAYAYEMSNEEHQQLADVLNSVQGFVAISG CCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEEC YDCDLMNELYSPPKWIKHVGPTRTIHSTKDQRTEILWTNYDPILYQSHTLFGVELGKSS CCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEECCEEEEEEECCCC >Mature Secondary Structure MKHQRTPSPILQRRTRRLIAFGWYGGKYSHLDWLLPLLPPCHHYCEPFGGSAAVLLNRDP CCCCCCCCHHHHHHHHHEEEEEECCCCCCHHHHHHHHCCCHHHHHCCCCCCEEEEECCCC APVETYNDIDGEVTNFFRVLRDQPDQLTRAIALTPFSREEFALACEIDPSLEPIERARRF CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHEECCCCCCCEEEEEECCCCCCHHHHHHHH YVRARQVRTGLAQSASLGRWANCKQTSRSGMAGAISRWFGAIEDLPDIAIRLLRVQIENR HHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC PALEVIRLYDSPDTLFYCDPPYVHETRGDNNAYAYEMSNEEHQQLADVLNSVQGFVAISG CCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEEC YDCDLMNELYSPPKWIKHVGPTRTIHSTKDQRTEILWTNYDPILYQSHTLFGVELGKSS CCHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEECCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA