Definition | Agrobacterium radiobacter K84 plasmid pAtK84b, complete sequence. |
---|---|
Accession | NC_011990 |
Length | 184,668 |
Click here to switch to the map view.
The map label for this gene is trbE
Identifier: 222109063
GI number:
Start: 124737
End: 127205
Strand: Reverse
Name: trbE
Synonym: Arad_14177
Alternate gene names: NA
Gene position: NA
Preceding gene: 222109064
Following gene: 222109062
Centisome position: NA
GC content: NA
Gene sequence:
>2469_bases ATGGTGGCACTGAAACTCTTCCGACACTCCGGACCGTCATTCGCCGATCTGGTTCCTTATGCGGGCCTGGTCGACAATGG CGTGATCCTTCTGAAGGACGGCTCACTGACGGCCGGCTGGTATTTTGCCGGCCCGGACAGCGAAAGCTCGACAGACTCAG AGCGCAACGAGGTGTCGCGGCAGATCAATATGATCCTCTCACGTCTGGGCTCGGGCTGGATGATCCAGGTCGAGGCTTTG CGGGTCCCGACGATCGACTATCCGGCAGAGGGCGCCTGCCACTTTCCCGATCCCGTCACCCGCGCCATCGATAAGGAGCG CAGGTCGCATTTCGAGAGGGAGAGCGGGCATTTCGAGAGCCGACACGCGCTGATCCTGACCTGGCGGCCGCCCGAGCCTC GGCGCTCCGGCTTGGCGCGCTACGTCTATTCCGACACTGCCAGCCGTTCGGCCACCTATGCCGACACGGCGCTAGAGTCT TTCCGGACCTCGATCCGCGAGGTTGAGCAGTACCTTGCCAATGTCGTCTCCATCCGCCGCATGGTGACGCGCGAAACCGA AGAGCGCGGGGGTTTCCGGATAGCCCGCTATGACGAGCTGTTCCAGTTCATCCGCTTCTGCATCACCGGTGAGAACCATC CAGTCCGGCTCCCGGATATCCCGATGTATCTTGACTGGCTGGTCACGGCCGAGCTGCAGCACGGTCTGACGCCGACGGTC GAGAACCGCTTCCTCGGCGTCGTCGCCATTGACGGCTTAGCCGCGGAGAGCTGGCCGGGGATCCTCAACAGCCTCGACCT GATGCCGCTCACCTATCGGTGGTCGTCGCGCTTCGTTTTTCTCGACGAGCAGGAGGCACGCCAGAAGCTGGAGCGCACCC GCAAGAAATGGCAGCAGAAGGTGCGGCCGTTCTTCGATCAGCTTTTCCAGACCCAGAGCCGTTCGGTGGATCAGGACGCC ATGATGATGGTGGCCGAGACGGAGGACGCAATCGCCGAGGCATCGTCGCAGCTCGTCGCTTATGGATATTACACGCCGGT CATCGTGTTGTTCGATGAACAGCAAGAACGGCTTCAGGAAAAGTGCGAGGCGATCCGTCGATTGATCCAGGCCGAAGGAT TCGGCGCCCGGATCGAGACGCTGAACGCGACTGACGCCTTTCTGGGCAGTCTGCCGGGTGTCTCCTATGCCAATATCCGC GAGCCGCTCGTCAATACGCGCAATCTCGCTGACCTCATTCCGCTGAACTCGGTCTGGTCCGGAAGCCCCATCGCACCGTG CCCGTTCTATCCGCCGGGATCGCCGCCGCTCATGCAGGTCGCCAGCGGCTCGACGCCGTTCCGCCTGAACCTGCATGTCG ATGATGTCGGGCATGCGCTGGTCTTCGGCCCGACCGGCTCGGGCAAATCGACTTTGCTGTCGCTGATCGCCGCGCAGTTT CGGCGCTATGCGGATGCGCAGATATTCGCTTTCGACAAGGGGCGGTCGATGTTGCCGCTGACACTCGCCATCGGCGGCGA TCACTACGAAATCGGCGGGGACGCGTCCGGAGAAGGGGAGGGGGCTTCGCCGCGACTGGCCTTCTGCCCGCTCGCCGAAC TCGCGTCGGACGGCGACCGCGCCTGGGCGGCGGAGTGGATCGAGACGCTCGTCGCCCTGCAGGGCGTCACGGTTACGCCT GACTATCGCAACGCCATTTCCAGGCAGTTGGGCCTGATGGCGGAATCGCGCGGCCGCTCGCTCTCGGACTTCGTCTCCGG TGTGCAGATGCGCGAGATCAAGGATGCGCTGCACCACTACACGGTCGATGGACCGATGGGCCAGTTGCTTGATGCCGAAC AGGACGGACTGGCGCTCGGCGCTTTCCAGTGCTTCGAGGTCGAGGAGCTGATGAATATGGGTGAGCGCAATCTCGTCCCG GTCCTGCTCTATATGTTCCGGCGGGTCGAGAAGCGGCTGACGGGGGCGCCCAGCCTCATTATTCTCGATGAGGCCTGGCT GATGCTCGGTCATCCGACGTTCCGCGACAAGATACGTGAATGGCTGAAGGTTCTGCGCAAGGCCAACTGCGCAGTCGTGC TCGCCACGCAGTCGATCTCCGACGCCGAGCGCTCCGGTATCATCGACGTGCTGAAGGAATCCTGCCCGACCAAGATATGT CTGCCCAACGGCGCGGCACGCGAGCCAGGGACGCGCGAGTTCTATGAGCGCATCGGTTTCAATGAGCGACAGATCGAGAT CGTCGCCACCGCACTGCCGAAACGCGAATATTACGTCGCCTCGCCGGAGGGCCGCCGGCTGTTCGATATGTCGCTCGGTC CCGTAGCGCTTTCCTTCGTCGGTGCGTCCGGCAAGGAGGACCTGAAGCGCATCCGCGCCCTTCACTTCCAACACGGGGCG GATTGGCCCAAGCACTGGCTCCAGCAAAGGGGGATCGCCCATGCCGAAACACTTTTCCAGGCCGCTTGA
Upstream 100 bases:
>100_bases GCCGATCCGCTGATGCGCCGCGTCTATCTGCGGCACGTGTCCTATCGATCCATCTACAGGACGACCTCGACGCCGTGGCG CAAGTTCTGAAGAGGCGGAC
Downstream 100 bases:
>100_bases AGCGGCGCGCGCCGCCATGATCACGGCCATCATCGTCCCGGTCGCTCTGCCGTTTACCGCATATGCCGGCGGCGTTACCG GACAGGCCACCGAATGGACC
Product: conjugal transfer protein TrbE
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>822_residues MVALKLFRHSGPSFADLVPYAGLVDNGVILLKDGSLTAGWYFAGPDSESSTDSERNEVSRQINMILSRLGSGWMIQVEAL RVPTIDYPAEGACHFPDPVTRAIDKERRSHFERESGHFESRHALILTWRPPEPRRSGLARYVYSDTASRSATYADTALES FRTSIREVEQYLANVVSIRRMVTRETEERGGFRIARYDELFQFIRFCITGENHPVRLPDIPMYLDWLVTAELQHGLTPTV ENRFLGVVAIDGLAAESWPGILNSLDLMPLTYRWSSRFVFLDEQEARQKLERTRKKWQQKVRPFFDQLFQTQSRSVDQDA MMMVAETEDAIAEASSQLVAYGYYTPVIVLFDEQQERLQEKCEAIRRLIQAEGFGARIETLNATDAFLGSLPGVSYANIR EPLVNTRNLADLIPLNSVWSGSPIAPCPFYPPGSPPLMQVASGSTPFRLNLHVDDVGHALVFGPTGSGKSTLLSLIAAQF RRYADAQIFAFDKGRSMLPLTLAIGGDHYEIGGDASGEGEGASPRLAFCPLAELASDGDRAWAAEWIETLVALQGVTVTP DYRNAISRQLGLMAESRGRSLSDFVSGVQMREIKDALHHYTVDGPMGQLLDAEQDGLALGAFQCFEVEELMNMGERNLVP VLLYMFRRVEKRLTGAPSLIILDEAWLMLGHPTFRDKIREWLKVLRKANCAVVLATQSISDAERSGIIDVLKESCPTKIC LPNGAAREPGTREFYERIGFNERQIEIVATALPKREYYVASPEGRRLFDMSLGPVALSFVGASGKEDLKRIRALHFQHGA DWPKHWLQQRGIAHAETLFQAA
Sequences:
NA
Specific function: NA
COG id: COG3451
COG function: function code U; Type IV secretory pathway, VirB4 components
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA