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The map label for this gene is bclA

Identifier: 222094936

GI number: 222094936

Start: 1268400

End: 1269305

Strand: Reverse

Name: bclA

Synonym: BCQ_1274

Alternate gene names: NA

Gene position: 1269305-1268400 (Counterclockwise)

Preceding gene: 222094948

Following gene: 222094935

Centisome position: 24.34

GC content: 47.02

Gene sequence:

>906_bases
ATGTCAAATAATAATTATTCAGATGGATTGAATCCCGATGAATCTTTATCAGCTAGTGCATTTGACCCTAATCTTGTAGG
ACCAACATTACCACCAATACCACCGTTTACCCTTCCGACTGGGCCAACTGGACCGACTGGACCAACTGGGCCGACTGGGC
CAACTGTACCAACTGGGCCAACTGGGCCAACTGGGCCAACTGGACCGACTGGACCGACTGGGCCAACTGGTACAACTGGT
ACAACTGGTACAACTGGTACAACTGGACCAACTGGTGCTACTGGACCGACTGGGCCAACTGGTACAACTGGTACGACTGG
ACCAACTGGGCCAACTGGTACAACTGGTACGACTGGATCAACTGGGCCAACTGGTGACACTGGTGCTACTGGACCGACTG
GGCCAACTGGTGACACTGGTGCTACTGGACCGACTGGGGCTACCGGACCGACTGGGCCAACTGGACCGACTGGGCCAACT
GGACCGACTGGACCATCAGGGCTTGGACTTCCAGCAGGATTATATGCATTTAACTCCGGTGGGATTTCTTTAGATCTAGG
AATTAATGATCCACTACCATTTAATACTGTTGGATCTCAGTTTGGTACAGCAATTTCTCAATTAGATGCTGATACTTTCG
TAATTAGTGAAACTGGATTCTATAAAATCACTGTTATCGCTAATACTGCAACAGTCAGTGCATTAGGAGGTCTTACAATC
CAAGTGAATGGAGTACCTGTACCAGGTACTGGATCAAGTTTAATCTCACTTGGAGCACCTATCGTTATTCAAGCAATTAC
GCAAATTACGACAACTCCATCATTAGTTGAAGTAATTGTTACAGGGCTTGGATTATCATTAGCTCTTGGTACGAGTGCAT
CCATTATTATTGAAAAAATCGCTTAA

Upstream 100 bases:

>100_bases
ACAAGCAGTTTAAGATTTCTTTTCAATAATTCAAATGTCCGTGTCATTTTCTTTCGGTTTTGCATCTACTATATAATGAA
CGCTTTATGGAGGTGAATTT

Downstream 100 bases:

>100_bases
ATTTTTACTTAGCAGTAAAACTGATATCAGTTTTACTGCTTTTTCATTGGTAAATTCAATCATTAAATCCTTCTTTTCTA
CATAGTCATAATGTTGTATG

Product: bcla protein

Products: NA

Alternate protein names: Triple Helix Repeat-Containing Collagen

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSNNNYSDGLNPDESLSASAFDPNLVGPTLPPIPPFTLPTGPTGPTGPTGPTGPTVPTGPTGPTGPTGPTGPTGPTGTTG
TTGTTGTTGPTGATGPTGPTGTTGTTGPTGPTGTTGTTGSTGPTGDTGATGPTGPTGDTGATGPTGATGPTGPTGPTGPT
GPTGPSGLGLPAGLYAFNSGGISLDLGINDPLPFNTVGSQFGTAISQLDADTFVISETGFYKITVIANTATVSALGGLTI
QVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVIVTGLGLSLALGTSASIIIEKIA

Sequences:

>Translated_301_residues
MSNNNYSDGLNPDESLSASAFDPNLVGPTLPPIPPFTLPTGPTGPTGPTGPTGPTVPTGPTGPTGPTGPTGPTGPTGTTG
TTGTTGTTGPTGATGPTGPTGTTGTTGPTGPTGTTGTTGSTGPTGDTGATGPTGPTGDTGATGPTGATGPTGPTGPTGPT
GPTGPSGLGLPAGLYAFNSGGISLDLGINDPLPFNTVGSQFGTAISQLDADTFVISETGFYKITVIANTATVSALGGLTI
QVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVIVTGLGLSLALGTSASIIIEKIA
>Mature_300_residues
SNNNYSDGLNPDESLSASAFDPNLVGPTLPPIPPFTLPTGPTGPTGPTGPTGPTVPTGPTGPTGPTGPTGPTGPTGTTGT
TGTTGTTGPTGATGPTGPTGTTGTTGPTGPTGTTGTTGSTGPTGDTGATGPTGPTGDTGATGPTGATGPTGPTGPTGPTG
PTGPSGLGLPAGLYAFNSGGISLDLGINDPLPFNTVGSQFGTAISQLDADTFVISETGFYKITVIANTATVSALGGLTIQ
VNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVIVTGLGLSLALGTSASIIIEKIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI56847616, Length=244, Percent_Identity=31.5573770491803, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI48762934, Length=120, Percent_Identity=47.5, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI65301115, Length=244, Percent_Identity=31.1475409836066, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI98985810, Length=119, Percent_Identity=44.5378151260504, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI98985806, Length=119, Percent_Identity=44.5378151260504, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI299523257, Length=119, Percent_Identity=44.5378151260504, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI299523253, Length=119, Percent_Identity=44.5378151260504, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI110735435, Length=130, Percent_Identity=45.3846153846154, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI111118968, Length=123, Percent_Identity=44.7154471544715, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI111118972, Length=123, Percent_Identity=44.7154471544715, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI111118970, Length=123, Percent_Identity=44.7154471544715, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17569903, Length=121, Percent_Identity=43.801652892562, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71989452, Length=129, Percent_Identity=40.3100775193798, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17535735, Length=128, Percent_Identity=42.96875, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17539078, Length=147, Percent_Identity=37.4149659863946, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28316; Mature: 28184

Theoretical pI: Translated: 3.36; Mature: 3.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNNYSDGLNPDESLSASAFDPNLVGPTLPPIPPFTLPTGPTGPTGPTGPTGPTVPTGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPTGPTGPTGPTGPTGTTGTTGTTGTTGPTGATGPTGPTGTTGTTGPTGPTGTTGTTGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPTGDTGATGPTGPTGDTGATGPTGATGPTGPTGPTGPTGPTGPSGLGLPAGLYAFNSG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
GISLDLGINDPLPFNTVGSQFGTAISQLDADTFVISETGFYKITVIANTATVSALGGLTI
CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCEEHHHCCEEE
QVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVIVTGLGLSLALGTSASIIIEKI
EECCEECCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCEEEEEEC
A
C
>Mature Secondary Structure 
SNNNYSDGLNPDESLSASAFDPNLVGPTLPPIPPFTLPTGPTGPTGPTGPTGPTVPTGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPTGPTGPTGPTGPTGTTGTTGTTGTTGPTGATGPTGPTGTTGTTGPTGPTGTTGTTGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPTGDTGATGPTGPTGDTGATGPTGATGPTGPTGPTGPTGPTGPSGLGLPAGLYAFNSG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
GISLDLGINDPLPFNTVGSQFGTAISQLDADTFVISETGFYKITVIANTATVSALGGLTI
CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCEEHHHCCEEE
QVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVIVTGLGLSLALGTSASIIIEKI
EECCEECCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCEEEEEEC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA