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The map label for this gene is yobO [H]

Identifier: 222094930

GI number: 222094930

Start: 1261888

End: 1263276

Strand: Reverse

Name: yobO [H]

Synonym: BCQ_1268

Alternate gene names: 222094930

Gene position: 1263276-1261888 (Counterclockwise)

Preceding gene: 222094931

Following gene: 222094925

Centisome position: 24.23

GC content: 39.38

Gene sequence:

>1389_bases
ATGAAGAAAAAATCTTCTAAACAAAAAAGAAAATGCCCGCCTTTTTATCTGCCCATGTACGGAATTAACAACTGGTGCAG
CATTCGAGCTGCAGCTGTAGAAGAACTGGAAGAACAAGAGGCTTCCACAAAAAACAAAGATAGACCAAAATATGTCTCAT
TACAGAATGCTGTAATGAGCCGCATAATTGATAATAGAAAAGCAAAGATGCAGCAAAAAAATAAACCTCTCTCTACTCAT
ATTGAACAGATTGTGCCTTCTGAGCAAGTAGAGAAGAATACAGAAGAAAACAGCCCTGTAGCAATAAATAAAAAAGCGGA
AGCAGAAATTCCAGCTGCTATTATAAATCAAGTAAAAAAAATTAAAGAAGCATTAGTACCATCAGGTGATATACAAACAG
AAAAAACGATTATCATTCAGACCCCTACATCTGAAAATAAAAAAGTAAAAAAAGATGGGCGGTATGCATATGCAGAGGGT
CTTCACTCTCATGCAGAGGGTACAGCTTCACATGCAGAAGGACTTCTCACACATGCAAAAGGTTCTTTCTCTCATGCAGA
AGGATCAAAAACAAAAGCAACTGGACATAGTTCCCATAGTGAAGGAAGTGAAACGACAGCAGGTGGCTCCTATTCTCATG
CGGAAGGTAAACATACAATCGCTTTAGGCGAAGCAGCACATGCAGAAGGAACCGCGACTATCGCTAACGGATTCTCTTCT
CATGCGGAAGGTAATCATACATCAACAGCTCATTTTGCAGGTAGCCATATTATGGGGCGCTTCGGCACAGCAGATGAATC
TTATTCTTGGTTTATTGCAAACGGCACAAATGAAACCGATCATAATATCGGTGCAAAGTGGCTTGCTCATAATGGAGAAA
TGTACATTGAGGGCGCTTCTTACAATGCAAGCGGAACTGATTTTGCGCAAATGTTTGAAACAGTAGACAATACTTTTATT
GATGTAGGTTATTTCGTTACATTTAGTAGCGAAGAAAAAATTCGAATCGCTACTTCAAACGATTCATTCATCTTAGGAAT
ATCTAGTGCCACCCCCGCTCTTATAGGAAATAGCGGTGCTTTAAGTTGGCAAAAACGCTATAAAACAGATAGCTTCGGAA
AACGTCAATATGTACGTACGGAATCGCAAGACATACAACCGCTTTTAAATACAGAATGGGATCCAGCTTGCAAATATATA
GCAAGAAAAGACCGTAACGAGTGGCTTCCTGTCGGATTAATTGGACAAATGTTAGTACGTGATGACGGTACTTGCGAAAC
GCATGGATATTGTCGTCCAAATAACGATGGCATTGCTACAAAATCTGAAAGTGGCTTTTTCGTTATAAAGCGCACGGGCG
ACAATCAAATTTTAATATTATTCCGCTAA

Upstream 100 bases:

>100_bases
TTAAAGTGGGATAAAAATTGGGTAAAGTCATTAAAAAAAGATGCAATAAAGTGCATCTTTTTTTAATGACACGGCATATA
CTGTCGCAGGAGGTGACAGA

Downstream 100 bases:

>100_bases
GAAAAAGGGAACAAAATTCTTCATTACATAAGAATTTTGTCCCCTTTTTAAATATGTCTTAATATCGCTTGCATATCGCT
TGGAATCGGTGTAGTGAAAG

Product: hep_hag family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MKKKSSKQKRKCPPFYLPMYGINNWCSIRAAAVEELEEQEASTKNKDRPKYVSLQNAVMSRIIDNRKAKMQQKNKPLSTH
IEQIVPSEQVEKNTEENSPVAINKKAEAEIPAAIINQVKKIKEALVPSGDIQTEKTIIIQTPTSENKKVKKDGRYAYAEG
LHSHAEGTASHAEGLLTHAKGSFSHAEGSKTKATGHSSHSEGSETTAGGSYSHAEGKHTIALGEAAHAEGTATIANGFSS
HAEGNHTSTAHFAGSHIMGRFGTADESYSWFIANGTNETDHNIGAKWLAHNGEMYIEGASYNASGTDFAQMFETVDNTFI
DVGYFVTFSSEEKIRIATSNDSFILGISSATPALIGNSGALSWQKRYKTDSFGKRQYVRTESQDIQPLLNTEWDPACKYI
ARKDRNEWLPVGLIGQMLVRDDGTCETHGYCRPNNDGIATKSESGFFVIKRTGDNQILILFR

Sequences:

>Translated_462_residues
MKKKSSKQKRKCPPFYLPMYGINNWCSIRAAAVEELEEQEASTKNKDRPKYVSLQNAVMSRIIDNRKAKMQQKNKPLSTH
IEQIVPSEQVEKNTEENSPVAINKKAEAEIPAAIINQVKKIKEALVPSGDIQTEKTIIIQTPTSENKKVKKDGRYAYAEG
LHSHAEGTASHAEGLLTHAKGSFSHAEGSKTKATGHSSHSEGSETTAGGSYSHAEGKHTIALGEAAHAEGTATIANGFSS
HAEGNHTSTAHFAGSHIMGRFGTADESYSWFIANGTNETDHNIGAKWLAHNGEMYIEGASYNASGTDFAQMFETVDNTFI
DVGYFVTFSSEEKIRIATSNDSFILGISSATPALIGNSGALSWQKRYKTDSFGKRQYVRTESQDIQPLLNTEWDPACKYI
ARKDRNEWLPVGLIGQMLVRDDGTCETHGYCRPNNDGIATKSESGFFVIKRTGDNQILILFR
>Mature_462_residues
MKKKSSKQKRKCPPFYLPMYGINNWCSIRAAAVEELEEQEASTKNKDRPKYVSLQNAVMSRIIDNRKAKMQQKNKPLSTH
IEQIVPSEQVEKNTEENSPVAINKKAEAEIPAAIINQVKKIKEALVPSGDIQTEKTIIIQTPTSENKKVKKDGRYAYAEG
LHSHAEGTASHAEGLLTHAKGSFSHAEGSKTKATGHSSHSEGSETTAGGSYSHAEGKHTIALGEAAHAEGTATIANGFSS
HAEGNHTSTAHFAGSHIMGRFGTADESYSWFIANGTNETDHNIGAKWLAHNGEMYIEGASYNASGTDFAQMFETVDNTFI
DVGYFVTFSSEEKIRIATSNDSFILGISSATPALIGNSGALSWQKRYKTDSFGKRQYVRTESQDIQPLLNTEWDPACKYI
ARKDRNEWLPVGLIGQMLVRDDGTCETHGYCRPNNDGIATKSESGFFVIKRTGDNQILILFR

Specific function: Unknown

COG id: COG5295

COG function: function code UW; Autotransporter adhesin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021865
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF11962 DUF3476 [H]

EC number: NA

Molecular weight: Translated: 50758; Mature: 50758

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKSSKQKRKCPPFYLPMYGINNWCSIRAAAVEELEEQEASTKNKDRPKYVSLQNAVMS
CCCCCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
RIIDNRKAKMQQKNKPLSTHIEQIVPSEQVEKNTEENSPVAINKKAEAEIPAAIINQVKK
HHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHH
IKEALVPSGDIQTEKTIIIQTPTSENKKVKKDGRYAYAEGLHSHAEGTASHAEGLLTHAK
HHHHHCCCCCCCCCCEEEEECCCCCCCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCC
GSFSHAEGSKTKATGHSSHSEGSETTAGGSYSHAEGKHTIALGEAAHAEGTATIANGFSS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCHH
HAEGNHTSTAHFAGSHIMGRFGTADESYSWFIANGTNETDHNIGAKWLAHNGEMYIEGAS
CCCCCCCCCHHCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCEEEEEECC
YNASGTDFAQMFETVDNTFIDVGYFVTFSSEEKIRIATSNDSFILGISSATPALIGNSGA
CCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEECCCCC
LSWQKRYKTDSFGKRQYVRTESQDIQPLLNTEWDPACKYIARKDRNEWLPVGLIGQMLVR
CCHHHHCCCCCCCCHHHCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHC
DDGTCETHGYCRPNNDGIATKSESGFFVIKRTGDNQILILFR
CCCCCCCCCEECCCCCCCEEECCCCEEEEEECCCCEEEEEEC
>Mature Secondary Structure
MKKKSSKQKRKCPPFYLPMYGINNWCSIRAAAVEELEEQEASTKNKDRPKYVSLQNAVMS
CCCCCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
RIIDNRKAKMQQKNKPLSTHIEQIVPSEQVEKNTEENSPVAINKKAEAEIPAAIINQVKK
HHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHH
IKEALVPSGDIQTEKTIIIQTPTSENKKVKKDGRYAYAEGLHSHAEGTASHAEGLLTHAK
HHHHHCCCCCCCCCCEEEEECCCCCCCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCC
GSFSHAEGSKTKATGHSSHSEGSETTAGGSYSHAEGKHTIALGEAAHAEGTATIANGFSS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCHH
HAEGNHTSTAHFAGSHIMGRFGTADESYSWFIANGTNETDHNIGAKWLAHNGEMYIEGAS
CCCCCCCCCHHCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCEEEEEECC
YNASGTDFAQMFETVDNTFIDVGYFVTFSSEEKIRIATSNDSFILGISSATPALIGNSGA
CCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEECCCCC
LSWQKRYKTDSFGKRQYVRTESQDIQPLLNTEWDPACKYIARKDRNEWLPVGLIGQMLVR
CCHHHHCCCCCCCCHHHCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHC
DDGTCETHGYCRPNNDGIATKSESGFFVIKRTGDNQILILFR
CCCCCCCCCEECCCCCCCEEECCCCEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]