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The map label for this gene is gerPF

Identifier: 222094865

GI number: 222094865

Start: 1195888

End: 1196103

Strand: Reverse

Name: gerPF

Synonym: BCQ_1203

Alternate gene names: 222094865

Gene position: 1196103-1195888 (Counterclockwise)

Preceding gene: 222094866

Following gene: 222094857

Centisome position: 22.94

GC content: 39.35

Gene sequence:

>216_bases
ATGCCTTCTGTTGTTGGAAATCTCGTCGTGCAAAACAGTAATGGTTCTTTCAATTTAGGGGATTTTTATAACGTGTCTCC
GAAAGAAAATACGAAAGCTTATAATGGATCCGGAGCTTCCAATGTTGGATTTGTCGTGAATACTTTTAACGGTGTTAGTG
CAACAAATACGTTTGATTCTGATGTGGCGGATCAAGACCAGATTGGAACAGCGTAA

Upstream 100 bases:

>100_bases
TAACTCTCGTATTATGCAAATTCGCCAATATATTACGGATGAACCTTCCGCACAATAATTCATATAGTAATTAAAAAGCT
TAGTAAAGTAGGTGGATGGT

Downstream 100 bases:

>100_bases
AAAAAGTAGGAGAATATCTCCTACTTTTTCTTTTATTTAAATGATAACCCGCTCTCCTCCAAAGCCTTTCTAAGCTTTGG
CAAAGATGCTGGTCCCATAC

Product: spore germination protein pf

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNTFDSDVADQDQIGTA

Sequences:

>Translated_71_residues
MPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNTFDSDVADQDQIGTA
>Mature_70_residues
PSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNTFDSDVADQDQIGTA

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerPA/gerPF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GERPF_BACAN (P62186)

Other databases:

- EMBL:   AE016879
- EMBL:   AE017334
- EMBL:   AE017225
- RefSeq:   NP_843628.1
- RefSeq:   YP_017762.1
- RefSeq:   YP_027335.1
- EnsemblBacteria:   EBBACT00000011017
- EnsemblBacteria:   EBBACT00000018422
- EnsemblBacteria:   EBBACT00000022020
- GeneID:   1089136
- GeneID:   2820016
- GeneID:   2849416
- GenomeReviews:   AE016879_GR
- GenomeReviews:   AE017225_GR
- GenomeReviews:   AE017334_GR
- KEGG:   ban:BA_1144
- KEGG:   bar:GBAA_1144
- KEGG:   bat:BAS1063
- TIGR:   BA_1144
- TIGR:   GBAA_1144
- GeneTree:   EBGT00070000031962
- HOGENOM:   HBG363676
- OMA:   TGPIAIN
- ProtClustDB:   CLSK916112
- BioCyc:   BANT260799:BAS1063-MONOMER
- BioCyc:   BANT261594:GBAA1144-MONOMER
- InterPro:   IPR019618

Pfam domain/function: PF10676 gerPA

EC number: NA

Molecular weight: Translated: 7351; Mature: 7220

Theoretical pI: Translated: 3.76; Mature: 3.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNTFDS
CCCCCCEEEEECCCCCEECCCEEECCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCC
DVADQDQIGTA
CCCCCCCCCCC
>Mature Secondary Structure 
PSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNTFDS
CCCCCEEEEECCCCCEECCCEEECCCCCCCCEECCCCCCCCCEEEECCCCCCCCCCCCC
DVADQDQIGTA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629