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The map label for this gene is treC [H]

Identifier: 222094386

GI number: 222094386

Start: 697583

End: 699244

Strand: Direct

Name: treC [H]

Synonym: BCQ_0700

Alternate gene names: 222094386

Gene position: 697583-699244 (Clockwise)

Preceding gene: 222094385

Following gene: 222094390

Centisome position: 13.38

GC content: 33.87

Gene sequence:

>1662_bases
ATGAAGGATTGGCATAAAAGTGTAGTTTATCAAATTTATCCGAAGAGCTTTAATAGCTATTACAATAAAGAAACCGGTGA
TATAAAAGGGGTTACAGAAAAACTAGATTACTTAAAAGAACTCGGAGTAGATTATATTTGGTTAACACCGATATACCAAT
CGCCACAAAATGATAATGGATACGATGTAAGTGATTACTACCGTATTGATCCATCTTACGGAACGATGGAAGAGTTTGAA
GAGCTTTTAGAAGAAGCGAAAGCACGTAACATTGAAATTATGCTTGATATCGTTGTAAATCATAGTTCGACGGAGCATAA
GTGGTTTAAAGAAGCGAAGGAAGATAAAAATAGTCCATATCGTAATTACTATATTTGGCGTGATGAAAAAAATAATTGGC
AATCTAAGTTTGGTGGGTCTGCTTGGAAATATGATGAAAAGACAGAGCAATATTATTTACATCTATTTGATGAGACACAA
GCGGATTTAAACTGGGAAAATGAAAAACTTCGTGAAGAAGTATATGATATGATGCGCTTTTGGCTTGATAAAGGGGTAAC
TGGATTCCGATTAGATGTTATTAATTTAATTTCAAAAGATCAACAGTTCTTAAATGATGACGGAAGTACGGCGACAAGTG
ATGGCCGTAAATATTATACAGATGGCCCGCGTGTTCATGAATATTTACAAGAAATGAACCGAAATGTTTTTGAAGGGAAA
GATGTAATTACAGTTGGAGAAATGTCATCTACGACAATTGATAATTGTATTAAATATTCAAACCCTGAGCGTAATGAATT
AAGTATGACGTTTAGTTTCCATCATTTAAAAGTAGATTATCCGAATGGAGATAAGTGGACGAAAGCGAATTTTGATTTCA
TTAAATTAAAAGAGATTATGTCTAATTGGCAAATTGAAATGCAAAAGGGCGGGGGATGGAATGCGTTATTCTGGTGTAAT
CATGACCAGCCTCGTATTGTGTCACGCTTCGGTAATGATGAGAAGTATAGAAATGAATCTGCAAAAATGTTAGCAACGGC
TATGCATATGTTGCAAGGAACGCCTTATATTTATCAAGGCGAAGAAATCGGTATGACGAATCCTAATTTTGAGTCTATTG
AACAATATCGTGATGTGGAATCGTTAAATATATATGATATAAAGTTGGAAGAAGGATTATCAAAAGAAGAGATTATCGGG
ATTTTAAAACAAAAATCTCGTGACAACTCCCGTACTCCAATGCAGTGGAATGAAGAGATGAACAGTGGCTTTACAACAAG
TACACCTTGGATTTCAGTGGCTGAAAACTTTAAAGAAATAAACGTAGAGAAGGCATTAGAAGATAAAGAGTCTGTATTTT
ATCATTATAAAGAGTTAATAGAACTTAGAAAAACGTATGATGTAATTACAGAAGGAGAATATGCTATTTTGGATGAAAAT
GATCCTAAAATTTGGGCATATACTCGTACTACAGAAAGTGAAGTGCTACTTGTTATCAATAACTTCTATGGAGAGGAAAT
AACGTACTCTATACCAGCGCACGTTCAATTAGATGGAATGAAACAAGAAGTATTACTGTCGAATTATAAGGATTCCAGCA
AGGATATTACAAACCTTGACTTAAGACCATATGAATCAATTGTATATCGATATACGAAATAA

Upstream 100 bases:

>100_bases
CCAATGTTTATTGTCGGAATGATTATCGCAGTTGTAATTCCATTTACATTAACGTGGTTATTTGCAAAACGAGTAAAACA
GAAGTAGGAGGAAGTTAAAC

Downstream 100 bases:

>100_bases
AAGGTTGTATGCCTGCGTGGCATACAACCTTTTATTTTAAGACACCACTATACAAAATGCTTACTTCTACCTCAGGCTTA
AATTTTACTTTTGCATAATC

Product: trehalose-6-phosphate hydrolase

Products: NA

Alternate protein names: Alpha,alpha-phosphotrehalase [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MKDWHKSVVYQIYPKSFNSYYNKETGDIKGVTEKLDYLKELGVDYIWLTPIYQSPQNDNGYDVSDYYRIDPSYGTMEEFE
ELLEEAKARNIEIMLDIVVNHSSTEHKWFKEAKEDKNSPYRNYYIWRDEKNNWQSKFGGSAWKYDEKTEQYYLHLFDETQ
ADLNWENEKLREEVYDMMRFWLDKGVTGFRLDVINLISKDQQFLNDDGSTATSDGRKYYTDGPRVHEYLQEMNRNVFEGK
DVITVGEMSSTTIDNCIKYSNPERNELSMTFSFHHLKVDYPNGDKWTKANFDFIKLKEIMSNWQIEMQKGGGWNALFWCN
HDQPRIVSRFGNDEKYRNESAKMLATAMHMLQGTPYIYQGEEIGMTNPNFESIEQYRDVESLNIYDIKLEEGLSKEEIIG
ILKQKSRDNSRTPMQWNEEMNSGFTTSTPWISVAENFKEINVEKALEDKESVFYHYKELIELRKTYDVITEGEYAILDEN
DPKIWAYTRTTESEVLLVINNFYGEEITYSIPAHVQLDGMKQEVLLSNYKDSSKDITNLDLRPYESIVYRYTK

Sequences:

>Translated_553_residues
MKDWHKSVVYQIYPKSFNSYYNKETGDIKGVTEKLDYLKELGVDYIWLTPIYQSPQNDNGYDVSDYYRIDPSYGTMEEFE
ELLEEAKARNIEIMLDIVVNHSSTEHKWFKEAKEDKNSPYRNYYIWRDEKNNWQSKFGGSAWKYDEKTEQYYLHLFDETQ
ADLNWENEKLREEVYDMMRFWLDKGVTGFRLDVINLISKDQQFLNDDGSTATSDGRKYYTDGPRVHEYLQEMNRNVFEGK
DVITVGEMSSTTIDNCIKYSNPERNELSMTFSFHHLKVDYPNGDKWTKANFDFIKLKEIMSNWQIEMQKGGGWNALFWCN
HDQPRIVSRFGNDEKYRNESAKMLATAMHMLQGTPYIYQGEEIGMTNPNFESIEQYRDVESLNIYDIKLEEGLSKEEIIG
ILKQKSRDNSRTPMQWNEEMNSGFTTSTPWISVAENFKEINVEKALEDKESVFYHYKELIELRKTYDVITEGEYAILDEN
DPKIWAYTRTTESEVLLVINNFYGEEITYSIPAHVQLDGMKQEVLLSNYKDSSKDITNLDLRPYESIVYRYTK
>Mature_553_residues
MKDWHKSVVYQIYPKSFNSYYNKETGDIKGVTEKLDYLKELGVDYIWLTPIYQSPQNDNGYDVSDYYRIDPSYGTMEEFE
ELLEEAKARNIEIMLDIVVNHSSTEHKWFKEAKEDKNSPYRNYYIWRDEKNNWQSKFGGSAWKYDEKTEQYYLHLFDETQ
ADLNWENEKLREEVYDMMRFWLDKGVTGFRLDVINLISKDQQFLNDDGSTATSDGRKYYTDGPRVHEYLQEMNRNVFEGK
DVITVGEMSSTTIDNCIKYSNPERNELSMTFSFHHLKVDYPNGDKWTKANFDFIKLKEIMSNWQIEMQKGGGWNALFWCN
HDQPRIVSRFGNDEKYRNESAKMLATAMHMLQGTPYIYQGEEIGMTNPNFESIEQYRDVESLNIYDIKLEEGLSKEEIIG
ILKQKSRDNSRTPMQWNEEMNSGFTTSTPWISVAENFKEINVEKALEDKESVFYHYKELIELRKTYDVITEGEYAILDEN
DPKIWAYTRTTESEVLLVINNFYGEEITYSIPAHVQLDGMKQEVLLSNYKDSSKDITNLDLRPYESIVYRYTK

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=581, Percent_Identity=28.0550774526678, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI61744477, Length=106, Percent_Identity=32.0754716981132, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI65506891, Length=106, Percent_Identity=32.0754716981132, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI61744479, Length=106, Percent_Identity=32.0754716981132, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI61744475, Length=106, Percent_Identity=32.0754716981132, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI61744481, Length=106, Percent_Identity=32.0754716981132, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI61744483, Length=106, Percent_Identity=32.0754716981132, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1790687, Length=550, Percent_Identity=54.3636363636364, Blast_Score=622, Evalue=1e-179,
Organism=Escherichia coli, GI1786604, Length=212, Percent_Identity=27.8301886792453, Blast_Score=88, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI25147709, Length=588, Percent_Identity=23.469387755102, Blast_Score=120, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI32565753, Length=241, Percent_Identity=25.7261410788382, Blast_Score=92, Evalue=9e-19,
Organism=Saccharomyces cerevisiae, GI6322245, Length=575, Percent_Identity=38.6086956521739, Blast_Score=387, Evalue=1e-108,
Organism=Saccharomyces cerevisiae, GI6321726, Length=578, Percent_Identity=37.3702422145329, Blast_Score=377, Evalue=1e-105,
Organism=Saccharomyces cerevisiae, GI6324416, Length=585, Percent_Identity=37.9487179487179, Blast_Score=373, Evalue=1e-104,
Organism=Saccharomyces cerevisiae, GI6322241, Length=585, Percent_Identity=37.9487179487179, Blast_Score=372, Evalue=1e-104,
Organism=Saccharomyces cerevisiae, GI6322021, Length=585, Percent_Identity=37.9487179487179, Blast_Score=372, Evalue=1e-104,
Organism=Saccharomyces cerevisiae, GI6321731, Length=576, Percent_Identity=38.0208333333333, Blast_Score=370, Evalue=1e-103,
Organism=Saccharomyces cerevisiae, GI6319776, Length=576, Percent_Identity=37.8472222222222, Blast_Score=369, Evalue=1e-103,
Organism=Drosophila melanogaster, GI24583749, Length=492, Percent_Identity=35.1626016260163, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24583747, Length=492, Percent_Identity=35.1626016260163, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI221330053, Length=584, Percent_Identity=32.5342465753425, Blast_Score=271, Evalue=1e-72,
Organism=Drosophila melanogaster, GI24586597, Length=585, Percent_Identity=31.4529914529915, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24586599, Length=590, Percent_Identity=32.7118644067797, Blast_Score=263, Evalue=3e-70,
Organism=Drosophila melanogaster, GI24586593, Length=583, Percent_Identity=31.3893653516295, Blast_Score=261, Evalue=1e-69,
Organism=Drosophila melanogaster, GI24583745, Length=528, Percent_Identity=32.5757575757576, Blast_Score=259, Evalue=3e-69,
Organism=Drosophila melanogaster, GI24586589, Length=517, Percent_Identity=34.0425531914894, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI45549022, Length=563, Percent_Identity=31.9715808170515, Blast_Score=246, Evalue=3e-65,
Organism=Drosophila melanogaster, GI24586591, Length=589, Percent_Identity=30.8998302207131, Blast_Score=237, Evalue=1e-62,
Organism=Drosophila melanogaster, GI24586587, Length=593, Percent_Identity=29.8482293423271, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI281360393, Length=526, Percent_Identity=29.8479087452471, Blast_Score=203, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR012769 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.93 [H]

Molecular weight: Translated: 65557; Mature: 65557

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDWHKSVVYQIYPKSFNSYYNKETGDIKGVTEKLDYLKELGVDYIWLTPIYQSPQNDNG
CCCHHHCCEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
YDVSDYYRIDPSYGTMEEFEELLEEAKARNIEIMLDIVVNHSSTEHKWFKEAKEDKNSPY
CCCCCEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCC
RNYYIWRDEKNNWQSKFGGSAWKYDEKTEQYYLHLFDETQADLNWENEKLREEVYDMMRF
CEEEEEECCCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
WLDKGVTGFRLDVINLISKDQQFLNDDGSTATSDGRKYYTDGPRVHEYLQEMNRNVFEGK
HHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCC
DVITVGEMSSTTIDNCIKYSNPERNELSMTFSFHHLKVDYPNGDKWTKANFDFIKLKEIM
CEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCEEECCCCHHHHHHHH
SNWQIEMQKGGGWNALFWCNHDQPRIVSRFGNDEKYRNESAKMLATAMHMLQGTPYIYQG
CCCEEEEECCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEC
EEIGMTNPNFESIEQYRDVESLNIYDIKLEEGLSKEEIIGILKQKSRDNSRTPMQWNEEM
CCCCCCCCCHHHHHHHCCCCCCEEEEEEHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHH
NSGFTTSTPWISVAENFKEINVEKALEDKESVFYHYKELIELRKTYDVITEGEYAILDEN
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
DPKIWAYTRTTESEVLLVINNFYGEEITYSIPAHVQLDGMKQEVLLSNYKDSSKDITNLD
CCEEEEEEECCCCCEEEEEECCCCCCEEEECCCEEEECCCHHHHHHHCCCCCCCCCCCCC
LRPYESIVYRYTK
CCCHHHHHEEECC
>Mature Secondary Structure
MKDWHKSVVYQIYPKSFNSYYNKETGDIKGVTEKLDYLKELGVDYIWLTPIYQSPQNDNG
CCCHHHCCEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
YDVSDYYRIDPSYGTMEEFEELLEEAKARNIEIMLDIVVNHSSTEHKWFKEAKEDKNSPY
CCCCCEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCC
RNYYIWRDEKNNWQSKFGGSAWKYDEKTEQYYLHLFDETQADLNWENEKLREEVYDMMRF
CEEEEEECCCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
WLDKGVTGFRLDVINLISKDQQFLNDDGSTATSDGRKYYTDGPRVHEYLQEMNRNVFEGK
HHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCC
DVITVGEMSSTTIDNCIKYSNPERNELSMTFSFHHLKVDYPNGDKWTKANFDFIKLKEIM
CEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCEEECCCCHHHHHHHH
SNWQIEMQKGGGWNALFWCNHDQPRIVSRFGNDEKYRNESAKMLATAMHMLQGTPYIYQG
CCCEEEEECCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEC
EEIGMTNPNFESIEQYRDVESLNIYDIKLEEGLSKEEIIGILKQKSRDNSRTPMQWNEEM
CCCCCCCCCHHHHHHHCCCCCCEEEEEEHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHH
NSGFTTSTPWISVAENFKEINVEKALEDKESVFYHYKELIELRKTYDVITEGEYAILDEN
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
DPKIWAYTRTTESEVLLVINNFYGEEITYSIPAHVQLDGMKQEVLLSNYKDSSKDITNLD
CCEEEEEEECCCCCEEEEEECCCCCCEEEECCCEEEECCCHHHHHHHCCCCCCCCCCCCC
LRPYESIVYRYTK
CCCHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7651129; 8969503; 9384377; 7751281 [H]